Wall clock time and date at job start Sat Mar 6 2021 16:04:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34228 * 116.99879 * 2 1 4 4 O 1.20832 * 119.99797 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00295 * 179.97438 * 3 2 1 6 6 H 1.09001 * 112.84459 * 48.80572 * 5 3 2 7 7 C 1.53780 * 113.61422 * 179.97438 * 5 3 2 8 8 C 1.53784 * 87.07743 * 140.06678 * 7 5 3 9 9 H 1.08995 * 113.61706 * 219.93225 * 8 7 5 10 10 N 1.46504 * 113.61339 * 89.11361 * 8 7 5 11 11 C 1.34777 * 119.99854 * 156.52596 * 10 8 7 12 12 O 1.21633 * 119.99979 * 0.02562 * 11 10 8 13 13 C 1.47264 * 119.99990 * 180.27781 * 11 10 8 14 14 C 1.36334 * 126.96810 * 179.72597 * 13 11 10 15 15 C 1.51002 * 126.79483 * 0.03399 * 14 13 11 16 16 C 1.53384 * 108.25764 * 164.31325 * 15 14 13 17 17 C 1.53156 * 109.05478 * 48.43641 * 16 15 14 18 18 C 1.53134 * 109.52498 * 290.43410 * 17 16 15 19 19 N 1.35207 * 108.65990 * 179.97438 * 14 13 11 20 20 C 1.36429 * 109.90056 * 359.97438 * 19 14 13 21 21 C 1.50704 * 125.49232 * 180.02562 * 20 19 14 22 22 O 1.42895 * 109.47165 * 29.99945 * 21 20 19 23 23 Si 1.86302 * 109.46992 * 149.99944 * 21 20 19 24 24 C 1.34490 * 109.00857 * 359.74757 * 20 19 14 25 25 C 1.53782 * 87.17473 * 334.52844 * 8 7 5 26 26 H 1.09000 * 109.46789 * 179.97438 * 1 2 3 27 27 H 1.08999 * 109.47309 * 299.99843 * 1 2 3 28 28 H 1.09002 * 109.47023 * 60.00126 * 1 2 3 29 29 H 1.08997 * 113.61813 * 25.52140 * 7 5 3 30 30 H 1.09000 * 113.68749 * 254.62220 * 7 5 3 31 31 H 0.97000 * 120.00410 * 336.53321 * 10 8 7 32 32 H 1.09008 * 109.70190 * 283.97778 * 15 14 13 33 33 H 1.08995 * 109.70372 * 44.59238 * 15 14 13 34 34 H 1.08994 * 109.53025 * 288.56700 * 16 15 14 35 35 H 1.09006 * 109.61260 * 168.35726 * 16 15 14 36 36 H 1.09000 * 109.46130 * 170.41798 * 17 16 15 37 37 H 1.08998 * 109.46298 * 50.45543 * 17 16 15 38 38 H 1.08991 * 109.56317 * 291.17521 * 18 17 16 39 39 H 1.09002 * 109.55913 * 170.83279 * 18 17 16 40 40 H 1.09004 * 109.46644 * 269.99689 * 21 20 19 41 41 H 0.96695 * 114.00105 * 60.00155 * 22 21 20 42 42 H 1.48495 * 109.99988 * 179.97438 * 23 21 20 43 43 H 1.48499 * 110.00131 * 301.31828 * 23 21 20 44 44 H 1.08001 * 126.81664 * 180.23641 * 24 20 19 45 45 H 1.08997 * 113.62016 * 140.02596 * 25 8 7 46 46 H 1.09002 * 113.61061 * 270.92788 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0239 0.6363 -0.7550 7 6 4.1076 2.7143 -0.0001 8 6 5.1819 2.2270 0.9865 9 1 5.3988 2.9392 1.7826 10 7 6.3906 1.7180 0.3337 11 6 7.5614 1.7028 1.0011 12 8 7.6144 2.1113 2.1456 13 6 8.7777 1.1969 0.3428 14 6 10.0291 1.1218 0.8785 15 6 10.4446 1.5413 2.2684 16 6 11.8171 0.9247 2.5663 17 6 12.7533 1.1938 1.3844 18 6 12.3005 0.3707 0.1751 19 7 10.8653 0.5997 -0.0468 20 6 10.1774 0.3270 -1.1930 21 6 10.7671 -0.2635 -2.4479 22 8 11.8668 -1.1091 -2.1052 23 14 9.4680 -1.2626 -3.3339 24 6 8.8871 0.6646 -1.0203 25 6 4.1937 1.1235 1.3993 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 3.4176 3.4406 0.4294 30 1 4.5099 3.0304 -0.9626 31 1 6.3484 1.3920 -0.5790 32 1 10.5113 2.6281 2.3197 33 1 9.7147 1.1827 2.9941 34 1 11.7102 -0.1505 2.7093 35 1 12.2315 1.3733 3.4692 36 1 13.7707 0.9116 1.6554 37 1 12.7255 2.2541 1.1331 38 1 12.4755 -0.6876 0.3678 39 1 12.8604 0.6803 -0.7074 40 1 11.1147 0.5390 -3.0985 41 1 11.6304 -1.8468 -1.5266 42 1 10.0368 -1.8499 -4.5735 43 1 8.9630 -2.3405 -2.4460 44 1 8.0901 0.5662 -1.7426 45 1 4.6651 0.1549 1.5655 46 1 3.5270 1.4156 2.2108 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_16915396.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:32 Heat of formation + Delta-G solvation = -83.765073 kcal Electronic energy + Delta-G solvation = -29339.877397 eV Core-core repulsion = 25197.498585 eV Total energy + Delta-G solvation = -4142.378811 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.79903 -41.86124 -40.47138 -38.84534 -38.13361 -37.24457 -36.93470 -34.11767 -33.45514 -31.21455 -29.78254 -29.13535 -27.09960 -26.83472 -26.46253 -24.69425 -24.08009 -22.34638 -21.76313 -21.23524 -20.35153 -19.62222 -19.10255 -18.58414 -17.79889 -17.34140 -17.16793 -17.09186 -16.82520 -16.52637 -15.94607 -15.73990 -15.50002 -15.40943 -15.23940 -15.05625 -14.94454 -14.66393 -14.51593 -14.29941 -14.10058 -13.89775 -13.60762 -13.38291 -13.29288 -13.06390 -12.79987 -12.72537 -12.44419 -12.18717 -12.08709 -11.92744 -11.82362 -11.81296 -11.73456 -11.70739 -11.23624 -10.97547 -10.69972 -9.99734 -9.57549 -9.02103 -5.05776 0.82809 0.97169 1.22040 1.39261 1.57118 1.70307 1.76965 1.95456 2.36958 2.65807 3.06562 3.26364 3.34857 3.40514 3.49019 3.60173 3.71204 3.74259 3.75171 3.78838 4.03584 4.14597 4.18948 4.19807 4.27526 4.28882 4.35842 4.40086 4.50848 4.52777 4.61644 4.64735 4.65912 4.70854 4.75362 4.77806 4.82051 4.88202 4.88401 5.00507 5.04720 5.13490 5.19238 5.44337 5.63470 5.73759 6.00531 6.19286 6.21013 6.69004 6.79348 7.47622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.505 6.505 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.125 4.125 8 C 0.126 3.874 9 H 0.113 0.887 10 N -0.712 5.712 11 C 0.598 3.402 12 O -0.545 6.545 13 C -0.235 4.235 14 C 0.122 3.878 15 C -0.056 4.056 16 C -0.129 4.129 17 C -0.140 4.140 18 C 0.108 3.892 19 N -0.428 5.428 20 C -0.012 4.012 21 C -0.051 4.051 22 O -0.533 6.533 23 Si 0.710 3.290 24 C -0.162 4.162 25 C -0.132 4.132 26 H 0.102 0.898 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.111 0.889 30 H 0.086 0.914 31 H 0.401 0.599 32 H 0.089 0.911 33 H 0.100 0.900 34 H 0.068 0.932 35 H 0.080 0.920 36 H 0.088 0.912 37 H 0.075 0.925 38 H 0.082 0.918 39 H 0.096 0.904 40 H 0.121 0.879 41 H 0.376 0.624 42 H -0.255 1.255 43 H -0.256 1.256 44 H 0.153 0.847 45 H 0.087 0.913 46 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.414 -2.076 -2.262 3.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.392 6.392 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.163 4.163 8 C 0.020 3.980 9 H 0.131 0.869 10 N -0.363 5.363 11 C 0.388 3.612 12 O -0.424 6.424 13 C -0.245 4.245 14 C 0.004 3.996 15 C -0.094 4.094 16 C -0.167 4.167 17 C -0.177 4.177 18 C -0.013 4.013 19 N -0.104 5.104 20 C -0.120 4.120 21 C -0.160 4.160 22 O -0.340 6.340 23 Si 0.609 3.391 24 C -0.186 4.186 25 C -0.171 4.171 26 H 0.121 0.879 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.129 0.871 30 H 0.105 0.895 31 H 0.236 0.764 32 H 0.107 0.893 33 H 0.119 0.881 34 H 0.086 0.914 35 H 0.099 0.901 36 H 0.107 0.893 37 H 0.094 0.906 38 H 0.101 0.899 39 H 0.115 0.885 40 H 0.139 0.861 41 H 0.224 0.776 42 H -0.179 1.179 43 H -0.180 1.180 44 H 0.170 0.830 45 H 0.105 0.895 46 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 1.692 -1.938 -2.110 3.327 hybrid contribution 0.365 -0.797 0.140 0.888 sum 2.058 -2.735 -1.970 3.949 Atomic orbital electron populations 1.23312 0.76074 1.03930 1.02686 1.86524 1.23632 1.33441 1.83824 1.23622 0.91742 0.81373 0.72034 1.90686 1.67000 1.36438 1.45074 1.22710 0.87405 1.01127 1.01925 0.85656 1.23356 0.97059 0.94679 1.01172 1.21717 0.83626 0.96130 0.96481 0.86948 1.45427 1.07527 1.65853 1.17525 1.17296 0.82013 0.76836 0.85034 1.90779 1.85936 1.47972 1.17668 1.19777 0.92801 1.15911 0.95973 1.20393 0.88816 0.98048 0.92306 1.20526 0.96975 1.01627 0.90256 1.21723 0.94880 1.01689 0.98385 1.21945 1.00526 1.00987 0.94263 1.22116 0.77794 1.01222 1.00159 1.43866 1.08456 1.47610 1.10484 1.20677 0.92286 1.09251 0.89803 1.24826 0.97244 0.98083 0.95885 1.86586 1.33545 1.42723 1.71097 0.94594 0.82190 0.82604 0.79722 1.21634 0.94895 1.06165 0.95912 1.23454 0.97908 1.01399 0.94381 0.87937 0.91780 0.91767 0.87077 0.89496 0.76366 0.89264 0.88130 0.91359 0.90143 0.89318 0.90615 0.89946 0.88527 0.86144 0.77604 1.17944 1.18049 0.82959 0.89454 0.88496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.51 10.57 -39.25 -0.41 -0.93 16 3 C 0.47 0.80 7.49 36.01 0.27 1.07 16 4 O -0.50 -2.29 15.65 -18.75 -0.29 -2.58 16 5 C -0.11 0.14 4.15 -90.82 -0.38 -0.23 16 6 H 0.13 -0.42 8.14 -51.93 -0.42 -0.85 16 7 C -0.12 0.18 7.15 -25.92 -0.19 -0.01 16 8 C 0.13 -0.07 4.30 -67.11 -0.29 -0.36 16 9 H 0.11 0.12 7.50 -51.93 -0.39 -0.27 16 10 N -0.71 0.43 5.26 -54.14 -0.28 0.15 16 11 C 0.60 1.52 7.81 -12.59 -0.10 1.42 16 12 O -0.55 -3.11 14.95 5.25 0.08 -3.03 16 13 C -0.24 -0.41 6.28 -103.48 -0.65 -1.06 16 14 C 0.12 0.21 6.57 -81.64 -0.54 -0.33 16 15 C -0.06 -0.05 5.32 -27.54 -0.15 -0.19 16 16 C -0.13 0.17 5.98 -26.45 -0.16 0.01 16 17 C -0.14 0.28 5.92 -26.58 -0.16 0.13 16 18 C 0.11 -0.16 5.32 -3.69 -0.02 -0.18 16 19 N -0.43 -0.15 3.11 -107.37 -0.33 -0.49 16 20 C -0.01 0.00 6.15 -81.87 -0.50 -0.50 16 21 C -0.05 0.08 2.99 36.01 0.11 0.19 16 22 O -0.53 0.44 10.68 -35.23 -0.38 0.06 16 23 Si 0.71 -1.66 31.10 -169.99 -5.29 -6.95 16 24 C -0.16 0.10 9.08 -37.47 -0.34 -0.24 16 25 C -0.13 0.12 7.45 -25.78 -0.19 -0.07 16 26 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 27 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.11 -0.03 7.44 -51.93 -0.39 -0.41 16 30 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 31 H 0.40 -1.29 7.83 -40.82 -0.32 -1.61 16 32 H 0.09 0.10 8.14 -51.92 -0.42 -0.33 16 33 H 0.10 0.20 7.40 -51.93 -0.38 -0.18 16 34 H 0.07 -0.08 8.12 -51.93 -0.42 -0.50 16 35 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 37 H 0.08 -0.11 8.11 -51.93 -0.42 -0.53 16 38 H 0.08 -0.19 7.94 -51.93 -0.41 -0.60 16 39 H 0.10 -0.13 7.70 -51.93 -0.40 -0.53 16 40 H 0.12 -0.26 7.96 -51.93 -0.41 -0.68 16 41 H 0.38 -1.12 8.63 45.56 0.39 -0.72 16 42 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 43 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 44 H 0.15 -0.61 6.51 -52.49 -0.34 -0.95 16 45 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.10 -0.06 8.10 -51.93 -0.42 -0.49 16 LS Contribution 374.55 15.07 5.64 5.64 Total: 0.00 -9.22 374.55 -10.39 -19.62 By element: Atomic # 1 Polarization: -5.27 SS G_CDS: -6.92 Total: -12.19 kcal Atomic # 6 Polarization: 2.90 SS G_CDS: -2.21 Total: 0.70 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.62 Total: -0.34 kcal Atomic # 8 Polarization: -5.48 SS G_CDS: -1.01 Total: -6.48 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.29 Total: -6.95 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -9.22 -10.39 -19.62 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_16915396.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.148 kcal (2) G-P(sol) polarization free energy of solvation -9.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.617 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds