Wall clock time and date at job start Sat Mar 6 2021 16:04:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.85007 * 311.20117 * 5 3 2 7 7 C 1.53781 * 113.60776 * 82.50380 * 5 3 2 8 8 C 1.53783 * 87.08007 * 139.98476 * 7 5 3 9 9 H 1.09000 * 113.69272 * 220.00717 * 8 7 5 10 10 N 1.46500 * 113.61386 * 89.11464 * 8 7 5 11 11 C 1.34774 * 120.00185 * 107.50719 * 10 8 7 12 12 O 1.21285 * 119.99576 * 359.97438 * 11 10 8 13 13 C 1.50693 * 120.00436 * 179.97438 * 11 10 8 14 14 O 1.42898 * 109.47596 * 179.97438 * 13 11 10 15 15 C 1.35897 * 117.00158 * 179.97438 * 14 13 11 16 16 C 1.38735 * 120.05550 * 359.73247 * 15 14 13 17 17 C 1.38147 * 119.93965 * 179.74005 * 16 15 14 18 18 C 1.38264 * 120.06099 * 0.50673 * 17 16 15 19 19 C 1.50696 * 119.94951 * 179.74292 * 18 17 16 20 20 O 1.42897 * 109.47154 * 120.01929 * 19 18 17 21 21 Si 1.86304 * 109.46724 * 0.02562 * 19 18 17 22 22 C 1.38268 * 120.10637 * 359.77057 * 18 17 16 23 23 C 1.38140 * 120.05667 * 359.97338 * 22 18 17 24 24 C 1.53780 * 87.08117 * 334.56585 * 8 7 5 25 25 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 26 26 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 28 28 H 1.09004 * 113.61426 * 254.52663 * 7 5 3 29 29 H 1.09001 * 113.62021 * 25.43661 * 7 5 3 30 30 H 0.97000 * 119.99979 * 287.50237 * 10 8 7 31 31 H 1.08999 * 109.47100 * 299.99942 * 13 11 10 32 32 H 1.08999 * 109.47490 * 59.99378 * 13 11 10 33 33 H 1.07997 * 120.02895 * 359.97438 * 16 15 14 34 34 H 1.08004 * 119.96774 * 180.27535 * 17 16 15 35 35 H 1.08995 * 109.47698 * 240.02846 * 19 18 17 36 36 H 0.96701 * 113.99835 * 180.02562 * 20 19 18 37 37 H 1.48491 * 110.00231 * 59.99804 * 21 19 18 38 38 H 1.48503 * 109.99767 * 181.31870 * 21 19 18 39 39 H 1.08000 * 119.96790 * 179.97438 * 22 18 17 40 40 H 1.08001 * 120.02366 * 179.97438 * 23 22 18 41 41 H 1.08998 * 113.61743 * 270.88807 * 24 8 7 42 42 H 1.08993 * 113.69443 * 139.98862 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0234 0.6366 0.7567 7 6 4.1915 1.1234 -1.3962 8 6 5.1814 2.2268 -0.9867 9 1 5.3977 2.9387 -1.7831 10 7 6.3905 1.7179 -0.3345 11 6 7.5670 1.7311 -0.9918 12 8 7.6246 2.1637 -2.1234 13 6 8.8109 1.2082 -0.3208 14 8 9.9200 1.3274 -1.2140 15 6 11.1268 0.8981 -0.7599 16 6 11.2422 0.3779 0.5210 17 6 12.4690 -0.0629 0.9782 18 6 13.5834 0.0237 0.1643 19 6 14.9216 -0.4525 0.6677 20 8 15.4043 -1.4978 -0.1786 21 14 14.7377 -1.0961 2.4063 22 6 13.4720 0.5471 -1.1107 23 6 12.2464 0.9843 -1.5745 24 6 4.1078 2.7143 0.0005 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 -0.8900 28 1 4.6621 0.1541 -1.5611 29 1 3.5242 1.4146 -2.2073 30 1 6.3443 1.3716 0.5704 31 1 9.0072 1.7866 0.5820 32 1 8.6684 0.1603 -0.0570 33 1 10.3730 0.3141 1.1588 34 1 12.5585 -0.4720 1.9738 35 1 15.6287 0.3769 0.6603 36 1 16.2636 -1.8534 0.0867 37 1 13.7760 -2.2274 2.4301 38 1 16.0563 -1.5395 2.9258 39 1 14.3439 0.6141 -1.7444 40 1 12.1601 1.3934 -2.5703 41 1 3.4174 3.4404 -0.4287 42 1 4.5091 3.0298 0.9635 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_2989410.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:37 Heat of formation + Delta-G solvation = -122.169570 kcal Electronic energy + Delta-G solvation = -25812.926496 eV Core-core repulsion = 21726.701298 eV Total energy + Delta-G solvation = -4086.225198 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.10412 -41.46886 -40.72382 -39.44691 -38.68787 -37.38384 -37.26678 -34.55139 -32.43424 -31.81753 -30.12086 -29.16577 -27.01843 -26.93852 -26.14051 -24.09323 -22.75718 -22.29228 -21.82285 -20.54309 -19.53327 -18.97985 -18.55831 -18.24387 -17.85666 -17.47726 -17.41806 -17.21476 -16.84244 -16.74417 -15.86271 -15.68706 -15.59467 -15.34141 -15.06287 -14.81757 -14.44843 -14.29950 -14.13009 -13.94541 -13.85917 -13.62541 -13.48236 -13.38702 -13.21927 -12.91068 -12.49239 -12.20298 -12.00601 -11.91152 -11.89479 -11.81982 -11.73031 -11.37347 -10.98595 -10.51062 -10.31506 -10.01119 -9.18827 -5.00517 0.30703 0.33035 1.10833 1.25935 1.33711 1.38933 1.56163 1.66589 1.92607 2.46748 2.63782 3.07910 3.16717 3.31517 3.37870 3.51517 3.62770 3.69553 3.80270 3.83625 3.86046 3.90196 3.92526 4.12853 4.20743 4.26861 4.32496 4.37011 4.46671 4.48224 4.54285 4.58321 4.63059 4.66373 4.71258 4.82586 4.97150 5.17309 5.26472 5.30825 5.34831 5.53936 5.68746 6.15488 6.32247 6.42859 6.68807 6.99512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.712 5.712 11 C 0.520 3.480 12 O -0.507 6.507 13 C 0.040 3.960 14 O -0.288 6.288 15 C 0.133 3.867 16 C -0.205 4.205 17 C -0.073 4.073 18 C -0.110 4.110 19 C -0.071 4.071 20 O -0.537 6.537 21 Si 0.679 3.321 22 C -0.050 4.050 23 C -0.145 4.145 24 C -0.124 4.124 25 H 0.064 0.936 26 H 0.103 0.897 27 H 0.064 0.936 28 H 0.088 0.912 29 H 0.100 0.900 30 H 0.404 0.596 31 H 0.098 0.902 32 H 0.096 0.904 33 H 0.133 0.867 34 H 0.130 0.870 35 H 0.076 0.924 36 H 0.379 0.621 37 H -0.256 1.256 38 H -0.262 1.262 39 H 0.133 0.867 40 H 0.136 0.864 41 H 0.114 0.886 42 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.050 -1.001 5.945 6.029 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.171 4.171 8 C 0.018 3.982 9 H 0.134 0.866 10 N -0.366 5.366 11 C 0.305 3.695 12 O -0.380 6.380 13 C -0.039 4.039 14 O -0.200 6.200 15 C 0.088 3.912 16 C -0.224 4.224 17 C -0.091 4.091 18 C -0.111 4.111 19 C -0.181 4.181 20 O -0.344 6.344 21 Si 0.581 3.419 22 C -0.068 4.068 23 C -0.164 4.164 24 C -0.162 4.162 25 H 0.083 0.917 26 H 0.122 0.878 27 H 0.083 0.917 28 H 0.107 0.893 29 H 0.118 0.882 30 H 0.239 0.761 31 H 0.115 0.885 32 H 0.114 0.886 33 H 0.151 0.849 34 H 0.148 0.852 35 H 0.094 0.906 36 H 0.227 0.773 37 H -0.180 1.180 38 H -0.187 1.187 39 H 0.151 0.849 40 H 0.154 0.846 41 H 0.132 0.868 42 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -0.654 -0.867 5.136 5.249 hybrid contribution 0.444 -0.942 0.130 1.050 sum -0.209 -1.809 5.266 5.572 Atomic orbital electron populations 1.23330 0.75892 1.04036 1.02749 1.86517 1.23779 1.33342 1.83787 1.23555 0.91666 0.81449 0.72154 1.90693 1.66970 1.36416 1.44961 1.22666 0.87728 1.01037 1.01792 0.85664 1.23409 0.97815 1.01196 0.94671 1.21806 0.83181 0.96464 0.96714 0.86567 1.45482 1.07127 1.65335 1.18689 1.20059 0.83991 0.78874 0.86622 1.90802 1.85398 1.44021 1.17768 1.22455 0.85143 1.02897 0.93385 1.86167 1.14123 1.79030 1.40717 1.19048 0.84986 0.94448 0.92737 1.21134 0.99064 1.06431 0.95783 1.20714 0.91593 0.97830 0.98943 1.19170 0.93607 1.02625 0.95649 1.24733 0.95392 0.93078 1.04910 1.86593 1.40692 1.53773 1.53326 0.95200 0.81754 0.86981 0.78002 1.20833 0.96829 0.94543 0.94583 1.20511 0.90263 1.04758 1.00818 1.23369 0.96907 0.94851 1.01040 0.91722 0.87838 0.91704 0.89335 0.88152 0.76131 0.88465 0.88599 0.84947 0.85235 0.90598 0.77277 1.18021 1.18685 0.84885 0.84587 0.86790 0.89436 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.29 10.57 -39.25 -0.41 -0.71 16 3 C 0.47 0.45 7.48 36.01 0.27 0.71 16 4 O -0.50 -1.95 15.65 -18.75 -0.29 -2.24 16 5 C -0.11 0.27 4.14 -90.96 -0.38 -0.11 16 6 H 0.13 -0.58 8.14 -51.93 -0.42 -1.00 16 7 C -0.13 0.28 7.43 -25.92 -0.19 0.09 16 8 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 9 H 0.12 -0.02 7.46 -51.93 -0.39 -0.40 16 10 N -0.71 2.13 5.26 -53.02 -0.28 1.85 16 11 C 0.52 0.16 7.91 -10.99 -0.09 0.07 16 12 O -0.51 -2.78 16.10 -14.36 -0.23 -3.01 16 13 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 14 O -0.29 -0.68 9.67 -39.32 -0.38 -1.06 16 15 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 16 C -0.21 0.07 9.04 -39.43 -0.36 -0.29 16 17 C -0.07 0.00 8.66 -39.61 -0.34 -0.34 16 18 C -0.11 -0.12 5.42 -104.60 -0.57 -0.69 16 19 C -0.07 0.02 2.81 36.00 0.10 0.12 16 20 O -0.54 -0.60 12.74 -35.23 -0.45 -1.05 16 21 Si 0.68 -0.84 29.78 -169.99 -5.06 -5.90 16 22 C -0.05 -0.07 9.60 -39.61 -0.38 -0.45 16 23 C -0.14 -0.28 9.99 -39.44 -0.39 -0.68 16 24 C -0.12 0.32 7.15 -25.92 -0.19 0.14 16 25 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 26 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 29 H 0.10 -0.16 8.09 -51.93 -0.42 -0.59 16 30 H 0.40 -2.56 8.70 -40.82 -0.36 -2.92 16 31 H 0.10 -0.45 7.65 -51.93 -0.40 -0.84 16 32 H 0.10 -0.41 7.68 -51.93 -0.40 -0.81 16 33 H 0.13 -0.46 6.30 -52.49 -0.33 -0.79 16 34 H 0.13 -0.28 4.87 -52.48 -0.26 -0.53 16 35 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 36 H 0.38 -1.07 8.74 45.56 0.40 -0.67 16 37 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 38 H -0.26 -0.24 7.11 56.52 0.40 0.17 16 39 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 40 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 41 H 0.11 -0.14 7.43 -51.93 -0.39 -0.53 16 42 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 LS Contribution 360.25 15.07 5.43 5.43 Total: 0.00 -11.74 360.25 -9.02 -20.76 By element: Atomic # 1 Polarization: -7.70 SS G_CDS: -5.53 Total: -13.22 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -1.81 Total: -0.85 kcal Atomic # 7 Polarization: 2.13 SS G_CDS: -0.28 Total: 1.85 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -1.77 Total: -8.07 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.06 Total: -5.90 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -11.74 -9.02 -20.76 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_2989410.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.408 kcal (2) G-P(sol) polarization free energy of solvation -11.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.153 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.761 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.170 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds