Wall clock time and date at job start Sat Mar 6 2021 16:04:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34226 * 116.99972 * 2 1 4 4 O 1.20829 * 120.00243 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00120 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.85047 * 50.33376 * 5 3 2 7 7 C 1.53781 * 113.61772 * 181.53091 * 5 3 2 8 8 C 1.53777 * 87.08336 * 140.06093 * 7 5 3 9 9 H 1.08996 * 113.61474 * 220.01758 * 8 7 5 10 10 N 1.46500 * 113.61088 * 89.11940 * 8 7 5 11 11 C 1.34772 * 120.00149 * 155.00452 * 10 8 7 12 12 O 1.21280 * 119.99925 * 359.97438 * 11 10 8 13 13 C 1.50696 * 120.00417 * 179.97438 * 11 10 8 14 14 C 1.52997 * 109.47736 * 179.97438 * 13 11 10 15 15 O 1.42894 * 109.47809 * 179.97438 * 14 13 11 16 16 C 1.35892 * 117.00716 * 180.02562 * 15 14 13 17 17 C 1.38738 * 120.05229 * 359.72718 * 16 15 14 18 18 C 1.38144 * 119.94352 * 179.74157 * 17 16 15 19 19 C 1.38267 * 120.05435 * 0.50880 * 18 17 16 20 20 C 1.50707 * 119.94221 * 179.74111 * 19 18 17 21 21 O 1.42901 * 109.47041 * 245.02518 * 20 19 18 22 22 Si 1.86298 * 109.47192 * 5.02721 * 20 19 18 23 23 C 1.38263 * 120.11244 * 359.77000 * 19 18 17 24 24 C 1.38142 * 120.05519 * 359.97414 * 23 19 18 25 25 C 1.53775 * 87.07992 * 334.56762 * 8 7 5 26 26 H 1.09000 * 109.47065 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47241 * 299.99853 * 1 2 3 28 28 H 1.09000 * 109.47033 * 60.00173 * 1 2 3 29 29 H 1.08997 * 113.61673 * 254.61641 * 7 5 3 30 30 H 1.09005 * 113.61396 * 25.51470 * 7 5 3 31 31 H 0.96999 * 119.99703 * 334.99353 * 10 8 7 32 32 H 1.09003 * 109.46893 * 299.99552 * 13 11 10 33 33 H 1.08999 * 109.47102 * 59.99481 * 13 11 10 34 34 H 1.09003 * 109.47035 * 300.00042 * 14 13 11 35 35 H 1.08999 * 109.46777 * 59.99860 * 14 13 11 36 36 H 1.08000 * 120.02907 * 0.02562 * 17 16 15 37 37 H 1.08000 * 119.97247 * 180.23607 * 18 17 16 38 38 H 1.09000 * 109.46791 * 125.02553 * 20 19 18 39 39 H 0.96700 * 113.99781 * 180.02562 * 21 20 19 40 40 H 1.48497 * 109.99876 * 299.99968 * 22 20 19 41 41 H 1.48506 * 110.00093 * 61.31477 * 22 20 19 42 42 H 1.07999 * 119.97032 * 179.97438 * 23 19 18 43 43 H 1.08006 * 120.02524 * 179.97438 * 24 23 19 44 44 H 1.08993 * 113.61636 * 270.87622 * 25 8 7 45 45 H 1.09008 * 113.61006 * 139.97865 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0223 0.6569 -0.7741 7 6 4.1078 2.7137 0.0371 8 6 5.1841 2.1995 1.0077 9 1 5.4017 2.8889 1.8234 10 7 6.3914 1.7088 0.3385 11 6 7.5697 1.7039 0.9926 12 8 7.6307 2.1063 2.1351 13 6 8.8116 1.1986 0.3045 14 6 10.0020 1.3014 1.2601 15 8 11.1794 0.8217 0.6078 16 6 12.3341 0.8441 1.3239 17 6 12.3351 1.3235 2.6258 18 6 13.5092 1.3403 3.3535 19 6 14.6848 0.8897 2.7818 20 6 15.9653 0.9146 3.5761 21 8 16.8822 1.8298 2.9729 22 14 15.6034 1.4576 5.3210 23 6 14.6875 0.4169 1.4826 24 6 13.5151 0.3931 0.7525 25 6 4.1954 1.0854 1.3898 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 4.5078 3.0549 -0.9177 30 1 3.4187 3.4279 0.4880 31 1 6.3426 1.3872 -0.5753 32 1 8.6677 0.1580 0.0135 33 1 9.0056 1.8006 -0.5832 34 1 10.1457 2.3421 1.5508 35 1 9.8081 0.6996 2.1479 36 1 11.4179 1.6789 3.0716 37 1 13.5098 1.7098 4.3684 38 1 16.4039 -0.0832 3.5896 39 1 17.7304 1.8969 3.4323 40 1 15.0050 2.8166 5.3162 41 1 14.6756 0.4965 5.9699 42 1 15.6071 0.0659 1.0381 43 1 13.5179 0.0240 -0.2626 44 1 3.5304 1.3544 2.2104 45 1 4.6664 0.1120 1.5269 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_4549602.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:40 Heat of formation + Delta-G solvation = -132.017666 kcal Electronic energy + Delta-G solvation = -27414.989099 eV Core-core repulsion = 23172.799237 eV Total energy + Delta-G solvation = -4242.189863 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.09995 -41.35177 -40.88506 -39.43234 -38.92801 -37.38387 -37.20610 -34.56450 -33.34547 -32.03057 -31.50521 -29.49276 -27.36936 -27.01690 -26.39847 -25.47934 -23.64290 -22.55433 -22.09071 -21.67673 -20.52877 -19.59371 -18.91713 -18.37510 -18.10462 -17.69618 -17.52020 -17.42120 -17.30895 -16.96051 -16.65364 -16.11192 -15.84722 -15.51862 -15.45923 -15.14324 -14.74706 -14.66170 -14.47025 -14.31106 -14.10960 -13.84485 -13.75013 -13.62570 -13.54357 -13.23801 -13.01060 -12.91713 -12.80040 -12.33965 -12.01380 -11.93310 -11.90304 -11.82976 -11.82052 -11.72969 -11.38186 -11.10910 -10.31155 -10.28440 -10.00313 -9.16066 -4.95839 0.31186 0.35038 1.10021 1.31058 1.40077 1.56217 1.65800 1.66061 1.99637 2.35404 2.66549 3.07302 3.15773 3.40642 3.45444 3.50076 3.61748 3.73019 3.77271 3.79040 3.86323 3.89855 4.01165 4.11997 4.19841 4.22356 4.26815 4.31894 4.34951 4.43545 4.46437 4.52693 4.53978 4.57599 4.60105 4.64346 4.69494 4.74015 4.82867 4.96272 5.20988 5.30203 5.31321 5.33765 5.53140 5.72614 6.20711 6.35449 6.65130 6.67800 6.97748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.124 4.124 8 C 0.121 3.879 9 H 0.115 0.885 10 N -0.713 5.713 11 C 0.525 3.475 12 O -0.533 6.533 13 C -0.141 4.141 14 C 0.073 3.927 15 O -0.315 6.315 16 C 0.138 3.862 17 C -0.201 4.201 18 C -0.082 4.082 19 C -0.114 4.114 20 C -0.066 4.066 21 O -0.546 6.546 22 Si 0.680 3.320 23 C -0.050 4.050 24 C -0.149 4.149 25 C -0.132 4.132 26 H 0.103 0.897 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.087 0.913 30 H 0.113 0.887 31 H 0.405 0.595 32 H 0.109 0.891 33 H 0.109 0.891 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.134 0.866 37 H 0.120 0.880 38 H 0.073 0.927 39 H 0.381 0.619 40 H -0.251 1.251 41 H -0.255 1.255 42 H 0.135 0.865 43 H 0.136 0.864 44 H 0.099 0.901 45 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.572 -3.389 -1.272 3.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.144 0.856 7 C -0.162 4.162 8 C 0.015 3.985 9 H 0.133 0.867 10 N -0.365 5.365 11 C 0.311 3.689 12 O -0.409 6.409 13 C -0.181 4.181 14 C -0.003 4.003 15 O -0.228 6.228 16 C 0.092 3.908 17 C -0.219 4.219 18 C -0.100 4.100 19 C -0.114 4.114 20 C -0.176 4.176 21 O -0.353 6.353 22 Si 0.581 3.419 23 C -0.068 4.068 24 C -0.167 4.167 25 C -0.171 4.171 26 H 0.122 0.878 27 H 0.083 0.917 28 H 0.083 0.917 29 H 0.105 0.895 30 H 0.131 0.869 31 H 0.240 0.760 32 H 0.127 0.873 33 H 0.128 0.872 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.152 0.848 37 H 0.138 0.862 38 H 0.091 0.909 39 H 0.229 0.771 40 H -0.176 1.176 41 H -0.180 1.180 42 H 0.153 0.847 43 H 0.154 0.846 44 H 0.118 0.882 45 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.219 -2.539 -0.475 2.592 hybrid contribution -0.744 -0.352 -0.860 1.190 sum -0.525 -2.891 -1.334 3.227 Atomic orbital electron populations 1.23330 0.75885 1.04046 1.02749 1.86517 1.23785 1.33330 1.83785 1.23552 0.91657 0.81452 0.72151 1.90693 1.66969 1.36422 1.44966 1.22655 0.87710 1.00998 1.01826 0.85645 1.23363 0.96922 0.94789 1.01139 1.21813 0.83559 0.96413 0.96701 0.86701 1.45633 1.07361 1.65884 1.17592 1.20317 0.84356 0.77711 0.86507 1.90767 1.85946 1.46453 1.17767 1.21464 0.91311 1.04997 1.00315 1.22430 0.82178 1.00522 0.95169 1.85966 1.15087 1.80264 1.41528 1.18947 0.86085 0.95502 0.90239 1.21213 0.99613 1.06588 0.94530 1.20689 0.92430 0.97958 0.98875 1.19248 0.93157 1.03317 0.95671 1.24597 0.90466 0.96131 1.06434 1.86500 1.28556 1.63768 1.56436 0.95430 0.87946 0.80646 0.77855 1.20822 0.97367 0.95998 0.92638 1.20506 0.90009 1.04780 1.01415 1.23397 0.97809 1.01090 0.94767 0.87821 0.91713 0.91714 0.89477 0.86889 0.76019 0.87258 0.87249 0.90857 0.90877 0.84815 0.86238 0.90886 0.77115 1.17625 1.18024 0.84705 0.84601 0.88247 0.89399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.37 10.56 -39.25 -0.41 -0.78 16 3 C 0.47 0.57 7.49 36.01 0.27 0.84 16 4 O -0.50 -2.08 15.66 -18.75 -0.29 -2.38 16 5 C -0.11 0.23 4.13 -90.96 -0.38 -0.15 16 6 H 0.13 -0.52 8.14 -51.93 -0.42 -0.94 16 7 C -0.12 0.28 7.14 -25.92 -0.19 0.09 16 8 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 9 H 0.12 -0.01 7.47 -51.93 -0.39 -0.40 16 10 N -0.71 1.96 5.26 -53.03 -0.28 1.69 16 11 C 0.52 -0.18 7.83 -10.99 -0.09 -0.26 16 12 O -0.53 -2.06 15.58 5.56 0.09 -1.97 16 13 C -0.14 0.31 6.07 -27.89 -0.17 0.14 16 14 C 0.07 0.03 4.03 37.16 0.15 0.18 16 15 O -0.31 -0.65 10.14 -19.40 -0.20 -0.85 16 16 C 0.14 0.42 6.69 -39.22 -0.26 0.16 16 17 C -0.20 -0.62 9.04 -39.43 -0.36 -0.98 16 18 C -0.08 -0.28 8.66 -39.61 -0.34 -0.63 16 19 C -0.11 -0.34 5.39 -104.60 -0.56 -0.90 16 20 C -0.07 -0.03 2.79 36.01 0.10 0.07 16 21 O -0.55 -0.38 12.81 -35.23 -0.45 -0.83 16 22 Si 0.68 -0.24 29.85 -169.99 -5.07 -5.31 16 23 C -0.05 -0.12 9.68 -39.61 -0.38 -0.50 16 24 C -0.15 -0.35 9.99 -39.44 -0.39 -0.75 16 25 C -0.13 0.26 7.43 -25.92 -0.19 0.06 16 26 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 29 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 30 H 0.11 -0.10 7.46 -51.93 -0.39 -0.49 16 31 H 0.40 -2.25 8.70 -40.82 -0.36 -2.61 16 32 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 33 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 34 H 0.07 0.07 7.61 -51.93 -0.40 -0.32 16 35 H 0.07 0.06 7.63 -51.93 -0.40 -0.34 16 36 H 0.13 0.25 6.30 -52.49 -0.33 -0.08 16 37 H 0.12 0.35 4.86 -52.49 -0.26 0.09 16 38 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 39 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 40 H -0.25 -0.73 7.05 56.52 0.40 -0.34 16 41 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 42 H 0.14 0.09 8.06 -52.49 -0.42 -0.34 16 43 H 0.14 0.09 8.06 -52.48 -0.42 -0.34 16 44 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 45 H 0.09 -0.18 8.14 -51.92 -0.42 -0.60 16 LS Contribution 381.30 15.07 5.75 5.75 Total: 0.00 -10.77 381.30 -9.26 -20.03 By element: Atomic # 1 Polarization: -6.88 SS G_CDS: -6.37 Total: -13.25 kcal Atomic # 6 Polarization: -0.08 SS G_CDS: -2.01 Total: -2.09 kcal Atomic # 7 Polarization: 1.96 SS G_CDS: -0.28 Total: 1.69 kcal Atomic # 8 Polarization: -5.54 SS G_CDS: -1.27 Total: -6.81 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: -5.07 Total: -5.31 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -10.77 -9.26 -20.03 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4549602.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.983 kcal (2) G-P(sol) polarization free energy of solvation -10.773 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.035 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds