Wall clock time and date at job start Sat Mar 6 2021 16:04:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34233 * 117.00346 * 2 1 4 4 O 1.20828 * 119.99577 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00172 * 179.97438 * 3 2 1 6 6 H 1.09004 * 112.84479 * 48.80723 * 5 3 2 7 7 C 1.53778 * 113.61086 * 179.97438 * 5 3 2 8 8 C 1.53787 * 87.08035 * 140.06661 * 7 5 3 9 9 H 1.08994 * 113.61447 * 220.02014 * 8 7 5 10 10 N 1.46496 * 113.61210 * 89.11438 * 8 7 5 11 11 C 1.34774 * 120.00099 * 155.00440 * 10 8 7 12 12 O 1.21560 * 119.99832 * 359.97438 * 11 10 8 13 13 C 1.47848 * 120.00646 * 180.02562 * 11 10 8 14 14 C 1.39549 * 120.14732 * 179.97438 * 13 11 10 15 15 C 1.37980 * 119.85208 * 179.97438 * 14 13 11 16 16 C 1.50707 * 119.92618 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.47056 * 90.00425 * 16 15 14 18 18 C 1.35896 * 116.99804 * 180.02562 * 17 16 15 19 19 C 1.38713 * 120.05333 * 180.02562 * 18 17 16 20 20 C 1.38162 * 119.94496 * 180.02562 * 19 18 17 21 21 C 1.50702 * 119.97274 * 180.02562 * 20 19 18 22 22 O 1.42895 * 109.46990 * 299.99430 * 21 20 19 23 23 Si 1.86301 * 109.46980 * 179.97438 * 21 20 19 24 24 C 1.38242 * 120.05451 * 359.97438 * 20 19 18 25 25 C 1.38283 * 120.11303 * 0.02562 * 24 20 19 26 26 C 1.38129 * 120.05612 * 359.67742 * 25 24 20 27 27 C 1.38339 * 120.14653 * 0.02562 * 15 14 13 28 28 C 1.38381 * 120.28786 * 359.97438 * 27 15 14 29 29 C 1.37935 * 120.14669 * 359.73918 * 28 27 15 30 30 C 1.53778 * 113.69101 * 277.53681 * 5 3 2 31 31 H 1.08996 * 109.47063 * 59.99778 * 1 2 3 32 32 H 1.08998 * 109.46979 * 179.97438 * 1 2 3 33 33 H 1.09001 * 109.46670 * 299.99840 * 1 2 3 34 34 H 1.08998 * 113.61879 * 25.52144 * 7 5 3 35 35 H 1.08999 * 113.61887 * 254.61251 * 7 5 3 36 36 H 0.97002 * 120.00490 * 335.00104 * 10 8 7 37 37 H 1.08002 * 120.07239 * 359.95349 * 14 13 11 38 38 H 1.09003 * 109.46651 * 209.99953 * 16 15 14 39 39 H 1.08997 * 109.46870 * 330.00212 * 16 15 14 40 40 H 1.08001 * 120.02926 * 359.97390 * 19 18 17 41 41 H 1.08995 * 109.47090 * 59.99844 * 21 20 19 42 42 H 0.96704 * 114.00079 * 180.02562 * 22 21 20 43 43 H 1.48500 * 110.00233 * 59.99671 * 23 21 20 44 44 H 1.48506 * 109.99875 * 181.31889 * 23 21 20 45 45 H 1.08000 * 119.94394 * 180.02562 * 24 20 19 46 46 H 1.08007 * 119.97570 * 179.97438 * 25 24 20 47 47 H 1.07998 * 120.02612 * 180.31809 * 26 25 24 48 48 H 1.07995 * 119.85153 * 179.97438 * 27 15 14 49 49 H 1.08002 * 119.92272 * 180.02562 * 28 27 15 50 50 H 1.08004 * 120.06902 * 180.27884 * 29 28 27 51 51 H 1.08993 * 113.61229 * 105.46294 * 30 5 3 52 52 H 1.09000 * 113.61263 * 334.55944 * 30 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0239 0.6361 -0.7550 7 6 4.1078 2.7141 -0.0001 8 6 5.1821 2.2269 0.9865 9 1 5.3979 2.9384 1.7835 10 7 6.3908 1.7179 0.3337 11 6 7.5677 1.7310 0.9902 12 8 7.6264 2.1657 2.1239 13 6 8.7877 1.2179 0.3313 14 6 10.0080 1.2306 1.0081 15 6 11.1426 0.7498 0.3875 16 6 12.4615 0.7633 1.1168 17 8 12.6225 -0.4629 1.8327 18 6 13.7674 -0.6132 2.5492 19 6 13.9893 -1.7789 3.2676 20 6 15.1539 -1.9291 3.9957 21 6 15.3959 -3.1954 4.7760 22 8 14.3589 -3.3637 5.7445 23 14 17.0424 -3.0868 5.6409 24 6 16.0978 -0.9191 4.0081 25 6 15.8789 0.2439 3.2928 26 6 14.7190 0.3964 2.5584 27 6 11.0725 0.2562 -0.9029 28 6 9.8656 0.2408 -1.5796 29 6 8.7227 0.7131 -0.9686 30 6 4.1926 1.1230 1.3969 31 1 -0.3633 0.5138 -0.8899 32 1 -0.3633 -1.0277 -0.0005 33 1 -0.3633 0.5138 0.8900 34 1 3.4178 3.4404 0.4294 35 1 4.5100 3.0290 -0.9630 36 1 6.3440 1.3713 -0.5711 37 1 10.0642 1.6164 2.0154 38 1 13.2731 0.8733 0.3975 39 1 12.4808 1.5982 1.8171 40 1 13.2521 -2.5680 3.2586 41 1 15.3990 -4.0467 4.0953 42 1 14.4508 -4.1604 6.2849 43 1 17.0518 -1.9299 6.5719 44 1 17.3074 -4.3424 6.3883 45 1 17.0077 -1.0386 4.5775 46 1 16.6177 1.0317 3.3044 47 1 14.5509 1.3028 1.9957 48 1 11.9637 -0.1186 -1.3842 49 1 9.8175 -0.1462 -2.5868 50 1 7.7805 0.6963 -1.4963 51 1 4.6631 0.1537 1.5613 52 1 3.5257 1.4140 2.2084 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_4549630.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:48 Heat of formation + Delta-G solvation = -96.709781 kcal Electronic energy + Delta-G solvation = -35032.118090 eV Core-core repulsion = 30123.017111 eV Total energy + Delta-G solvation = -4909.100979 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.165 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -42.12912 -41.48285 -41.14541 -40.04254 -39.16694 -38.69656 -37.47203 -37.43477 -34.78545 -33.25327 -32.59326 -32.16234 -31.04820 -29.44731 -27.80330 -27.11013 -26.88074 -26.58675 -25.06293 -23.64157 -23.12672 -22.57356 -22.13160 -21.44295 -20.50017 -19.13646 -18.97101 -18.63439 -18.57157 -17.95806 -17.50410 -17.37128 -17.29367 -17.10990 -17.07524 -16.80473 -16.16964 -16.09187 -15.84163 -15.63452 -15.52448 -15.19987 -14.99432 -14.74651 -14.55941 -14.49104 -14.30626 -14.07294 -13.92854 -13.69368 -13.60449 -13.49895 -13.42442 -13.23432 -13.16192 -12.88232 -12.75989 -12.54168 -12.15482 -12.04982 -11.93823 -11.89912 -11.85841 -11.78921 -11.70272 -11.41745 -11.17777 -10.58417 -10.34329 -10.02402 -9.97007 -9.89143 -9.25658 -4.92413 -0.26887 0.16265 0.20714 0.40349 1.04169 1.28133 1.61027 1.64922 1.70521 1.90398 1.95046 2.24129 2.63654 2.86951 3.19105 3.28754 3.35888 3.50539 3.53580 3.65240 3.73212 3.77316 3.80930 3.84391 3.99572 4.03404 4.09890 4.11055 4.18665 4.23857 4.24410 4.26940 4.26972 4.34275 4.44083 4.49325 4.52360 4.59684 4.64532 4.67055 4.67589 4.76005 4.76722 4.85170 4.90115 4.95434 4.98098 5.18390 5.25220 5.31160 5.32457 5.37884 5.40121 5.41558 5.46353 5.70649 5.79443 6.37079 6.38362 6.56156 6.62978 7.06434 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.468 3.532 4 O -0.538 6.538 5 C -0.104 4.104 6 H 0.155 0.845 7 C -0.115 4.115 8 C 0.121 3.879 9 H 0.095 0.905 10 N -0.692 5.692 11 C 0.562 3.438 12 O -0.579 6.579 13 C -0.156 4.156 14 C -0.055 4.055 15 C -0.115 4.115 16 C 0.098 3.902 17 O -0.327 6.327 18 C 0.117 3.883 19 C -0.148 4.148 20 C -0.048 4.048 21 C -0.094 4.094 22 O -0.561 6.561 23 Si 0.777 3.223 24 C -0.161 4.161 25 C -0.073 4.073 26 C -0.208 4.208 27 C -0.067 4.067 28 C -0.125 4.125 29 C -0.066 4.066 30 C -0.130 4.130 31 H 0.062 0.938 32 H 0.128 0.872 33 H 0.059 0.941 34 H 0.100 0.900 35 H 0.106 0.894 36 H 0.418 0.582 37 H 0.116 0.884 38 H 0.099 0.901 39 H 0.076 0.924 40 H 0.119 0.881 41 H 0.095 0.905 42 H 0.395 0.605 43 H -0.298 1.298 44 H -0.285 1.285 45 H 0.146 0.854 46 H 0.159 0.841 47 H 0.151 0.849 48 H 0.151 0.849 49 H 0.166 0.834 50 H 0.162 0.838 51 H 0.090 0.910 52 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.067 -3.213 -8.481 9.939 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.312 3.688 4 O -0.427 6.427 5 C -0.123 4.123 6 H 0.173 0.827 7 C -0.153 4.153 8 C 0.015 3.985 9 H 0.113 0.887 10 N -0.344 5.344 11 C 0.351 3.649 12 O -0.459 6.459 13 C -0.159 4.159 14 C -0.075 4.075 15 C -0.115 4.115 16 C 0.024 3.976 17 O -0.242 6.242 18 C 0.072 3.928 19 C -0.167 4.167 20 C -0.048 4.048 21 C -0.202 4.202 22 O -0.371 6.371 23 Si 0.682 3.318 24 C -0.179 4.179 25 C -0.090 4.090 26 C -0.227 4.227 27 C -0.085 4.085 28 C -0.143 4.143 29 C -0.085 4.085 30 C -0.169 4.169 31 H 0.081 0.919 32 H 0.146 0.854 33 H 0.078 0.922 34 H 0.118 0.882 35 H 0.124 0.876 36 H 0.257 0.743 37 H 0.134 0.866 38 H 0.116 0.884 39 H 0.094 0.906 40 H 0.137 0.863 41 H 0.113 0.887 42 H 0.246 0.754 43 H -0.226 1.226 44 H -0.212 1.212 45 H 0.163 0.837 46 H 0.177 0.823 47 H 0.168 0.832 48 H 0.169 0.831 49 H 0.183 0.817 50 H 0.180 0.820 51 H 0.109 0.891 52 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 3.880 -2.212 -7.235 8.502 hybrid contribution -1.577 -0.512 0.743 1.817 sum 2.303 -2.724 -6.492 7.407 Atomic orbital electron populations 1.23522 0.75116 1.05581 1.02431 1.86522 1.24716 1.33244 1.83479 1.24123 0.92686 0.80984 0.70962 1.90676 1.67929 1.37441 1.46690 1.22785 0.85758 1.01556 1.02153 0.82742 1.23286 0.95990 0.94594 1.01467 1.21742 0.83629 0.96412 0.96743 0.88693 1.45393 1.06329 1.63677 1.19022 1.18544 0.84009 0.77283 0.85093 1.90790 1.86609 1.48360 1.20183 1.19832 0.92880 1.06307 0.96837 1.21168 0.91528 0.95623 0.99150 1.19520 0.93770 1.02576 0.95615 1.21765 0.95496 0.85211 0.95153 1.86124 1.37106 1.39939 1.61020 1.19153 0.86161 0.94874 0.92661 1.20301 0.98852 0.97340 1.00213 1.19291 0.94149 0.95391 0.95975 1.25184 1.02262 0.97852 0.94853 1.86559 1.48616 1.50042 1.51842 0.94026 0.78528 0.76693 0.82595 1.21136 0.99968 0.93988 1.02789 1.21278 0.96682 0.97353 0.93711 1.21584 0.95769 1.00009 1.05301 1.21661 0.99906 0.94014 0.92963 1.21538 0.91431 0.99518 1.01768 1.21717 1.00710 0.93924 0.92122 1.23376 0.97516 1.01106 0.94884 0.91879 0.85405 0.92238 0.88191 0.87581 0.74252 0.86554 0.88350 0.90607 0.86303 0.88737 0.75447 1.22589 1.21204 0.83682 0.82300 0.83151 0.83139 0.81685 0.82016 0.89096 0.88893 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.84 10.57 -51.44 -0.54 -1.39 16 3 C 0.47 1.42 7.49 71.24 0.53 1.96 16 4 O -0.54 -5.10 15.65 21.96 0.34 -4.76 16 5 C -0.10 0.41 4.13 -11.02 -0.05 0.36 16 6 H 0.16 -1.54 8.14 -2.38 -0.02 -1.56 16 7 C -0.12 0.44 7.15 31.12 0.22 0.66 16 8 C 0.12 -0.15 4.33 45.53 0.20 0.05 16 9 H 0.09 0.34 7.46 -2.39 -0.02 0.32 16 10 N -0.69 1.92 5.21 -442.84 -2.31 -0.39 16 11 C 0.56 2.86 7.77 86.79 0.67 3.54 16 12 O -0.58 -8.48 15.95 -3.91 -0.06 -8.54 16 13 C -0.16 -0.32 5.87 -20.09 -0.12 -0.43 16 14 C -0.06 -0.27 9.24 22.52 0.21 -0.07 16 15 C -0.11 -0.14 5.50 -19.90 -0.11 -0.25 16 16 C 0.10 0.04 4.86 71.24 0.35 0.39 16 17 O -0.33 -2.22 10.12 -92.38 -0.93 -3.16 16 18 C 0.12 0.76 6.69 22.51 0.15 0.91 16 19 C -0.15 -1.19 9.55 22.37 0.21 -0.98 16 20 C -0.05 -0.24 5.42 -19.88 -0.11 -0.35 16 21 C -0.09 -0.17 2.81 71.24 0.20 0.03 16 22 O -0.56 -2.92 12.74 -148.98 -1.90 -4.82 16 23 Si 0.78 -0.94 29.79 68.60 2.04 1.10 16 24 C -0.16 -0.29 8.67 22.28 0.19 -0.10 16 25 C -0.07 0.00 10.04 22.25 0.22 0.22 16 26 C -0.21 -0.37 9.04 22.37 0.20 -0.17 16 27 C -0.07 0.23 9.69 22.33 0.22 0.44 16 28 C -0.12 0.79 10.03 22.23 0.22 1.02 16 29 C -0.07 0.36 9.54 22.53 0.21 0.57 16 30 C -0.13 0.27 7.43 31.13 0.23 0.50 16 31 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 32 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 33 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 34 H 0.10 -0.03 7.44 -2.39 -0.02 -0.04 16 35 H 0.11 -0.79 8.14 -2.39 -0.02 -0.81 16 36 H 0.42 -4.24 6.74 -92.71 -0.62 -4.87 16 37 H 0.12 0.99 7.65 -2.91 -0.02 0.96 16 38 H 0.10 -0.45 7.59 -2.39 -0.02 -0.47 16 39 H 0.08 -0.02 7.61 -2.39 -0.02 -0.04 16 40 H 0.12 1.10 8.06 -2.91 -0.02 1.08 16 41 H 0.09 -0.20 7.96 -2.39 -0.02 -0.21 16 42 H 0.40 -1.34 8.74 -74.05 -0.65 -1.98 16 43 H -0.30 -1.80 7.11 99.48 0.71 -1.09 16 44 H -0.28 -0.73 7.11 99.48 0.71 -0.02 16 45 H 0.15 -0.37 4.87 -2.91 -0.01 -0.39 16 46 H 0.16 -0.96 8.06 -2.91 -0.02 -0.98 16 47 H 0.15 -0.48 6.30 -2.91 -0.02 -0.50 16 48 H 0.15 -1.14 8.06 -2.91 -0.02 -1.16 16 49 H 0.17 -2.03 8.06 -2.91 -0.02 -2.06 16 50 H 0.16 -2.10 6.41 -2.91 -0.02 -2.12 16 51 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 52 H 0.09 -0.05 8.10 -2.39 -0.02 -0.07 16 Total: 0.00 -31.16 438.00 1.45 -29.71 By element: Atomic # 1 Polarization: -16.98 SS G_CDS: -0.25 Total: -17.23 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 5.07 Total: 9.46 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -2.31 Total: -0.39 kcal Atomic # 8 Polarization: -19.56 SS G_CDS: -3.10 Total: -22.66 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: 2.04 Total: 1.10 kcal Total: -31.16 1.45 -29.71 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4549630.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.003 kcal (2) G-P(sol) polarization free energy of solvation -31.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.164 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.707 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds