Wall clock time and date at job start Sat Mar 6 2021 16:05:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34226 * 117.00300 * 2 1 4 4 O 1.20829 * 119.99892 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00191 * 180.02562 * 3 2 1 6 6 H 1.08996 * 112.85300 * 311.19552 * 5 3 2 7 7 C 1.54052 * 113.62381 * 82.50592 * 5 3 2 8 8 C 1.53777 * 86.98996 * 139.97468 * 7 5 3 9 9 H 1.08996 * 113.61708 * 219.97706 * 8 7 5 10 10 N 1.46508 * 113.60891 * 89.16378 * 8 7 5 11 11 C 1.34777 * 119.99997 * 105.86480 * 10 8 7 12 12 O 1.21284 * 119.99863 * 359.97438 * 11 10 8 13 13 C 1.50692 * 119.99847 * 179.97438 * 11 10 8 14 14 O 1.42905 * 109.47141 * 180.02562 * 13 11 10 15 15 C 1.35901 * 117.00063 * 180.02562 * 14 13 11 16 16 C 1.38713 * 120.05607 * 179.97438 * 15 14 13 17 17 N 1.48006 * 120.02492 * 0.25246 * 16 15 14 18 18 O 1.21798 * 119.99534 * 179.72459 * 17 16 15 19 19 O 1.21802 * 120.00044 * 359.72520 * 17 16 15 20 20 C 1.38165 * 119.94238 * 179.97438 * 16 15 14 21 21 C 1.38245 * 120.05717 * 0.02562 * 20 16 15 22 22 C 1.50702 * 119.94289 * 180.02562 * 21 20 16 23 23 O 1.42901 * 109.46896 * 299.99677 * 22 21 20 24 24 Si 1.86292 * 109.47009 * 179.97438 * 22 21 20 25 25 C 1.38285 * 120.11183 * 0.02562 * 21 20 16 26 26 C 1.38119 * 120.05478 * 359.97438 * 25 21 20 27 27 C 1.53783 * 87.17400 * 334.57326 * 8 7 5 28 28 H 1.08995 * 109.47333 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.46706 * 300.00235 * 1 2 3 30 30 H 1.09000 * 109.47122 * 59.99730 * 1 2 3 31 31 H 1.09009 * 113.60789 * 25.46862 * 7 5 3 32 32 H 1.08997 * 113.69794 * 254.49964 * 7 5 3 33 33 H 0.97002 * 119.99482 * 285.85753 * 10 8 7 34 34 H 1.09007 * 109.47135 * 60.00262 * 13 11 10 35 35 H 1.08998 * 109.47587 * 300.00060 * 13 11 10 36 36 H 1.07997 * 119.96892 * 179.97438 * 20 16 15 37 37 H 1.08998 * 109.47189 * 59.99312 * 22 21 20 38 38 H 0.96700 * 114.00065 * 179.97438 * 23 22 21 39 39 H 1.48502 * 110.00080 * 298.67673 * 24 22 21 40 40 H 1.48496 * 110.00216 * 59.99643 * 24 22 21 41 41 H 1.07998 * 119.97203 * 179.97438 * 25 21 20 42 42 H 1.08005 * 120.02406 * 179.97438 * 26 25 21 43 43 H 1.08998 * 113.61620 * 140.01878 * 27 8 7 44 44 H 1.08998 * 113.60942 * 270.92007 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0239 0.6361 0.7549 7 6 4.1919 1.1235 -1.4002 8 6 5.1807 2.2270 -0.9887 9 1 5.3965 2.9391 -1.7850 10 7 6.3903 1.7178 -0.3375 11 6 7.5602 1.7026 -1.0066 12 8 7.6115 2.1099 -2.1478 13 6 8.8045 1.1794 -0.3366 14 8 9.9061 1.2670 -1.2427 15 6 11.1121 0.8322 -0.7917 16 6 12.2243 0.8878 -1.6187 17 7 12.1001 1.4260 -2.9918 18 8 13.0781 1.4792 -3.7158 19 8 11.0198 1.8158 -3.3977 20 6 13.4494 0.4456 -1.1576 21 6 13.5671 -0.0524 0.1267 22 6 14.9047 -0.5335 0.6272 23 8 15.3674 -1.6016 -0.2018 24 14 14.7306 -1.1382 2.3806 25 6 12.4596 -0.1099 0.9527 26 6 11.2327 0.3309 0.4965 27 6 4.1078 2.7142 -0.0005 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 3.5241 1.4157 -2.2108 32 1 4.6630 0.1549 -1.5671 33 1 6.3492 1.3918 0.5751 34 1 8.6522 0.1391 -0.0488 35 1 9.0168 1.7747 0.5514 36 1 14.3155 0.4883 -1.8012 37 1 15.6211 0.2874 0.5957 38 1 16.2254 -1.9610 0.0622 39 1 14.2808 -0.0281 3.2585 40 1 13.7563 -2.2574 2.4376 41 1 12.5541 -0.4997 1.9555 42 1 10.3680 0.2854 1.1420 43 1 4.5112 3.0288 0.9619 44 1 3.4172 3.4405 -0.4291 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_4549638.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:06 Heat of formation + Delta-G solvation = -113.818615 kcal Electronic energy + Delta-G solvation = -32380.039398 eV Core-core repulsion = 27463.159888 eV Total energy + Delta-G solvation = -4916.879509 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.128 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -43.04073 -42.14352 -41.70728 -40.88720 -39.79027 -38.92928 -37.58941 -37.37572 -37.13730 -34.61800 -33.56721 -32.50546 -30.41743 -29.28623 -27.62715 -27.09372 -27.02754 -26.57059 -24.24967 -22.86938 -22.57923 -22.08672 -20.62575 -20.39990 -19.51019 -19.15498 -19.05803 -18.69692 -18.39333 -18.31847 -17.92269 -17.69016 -17.51481 -17.36625 -17.04918 -16.63661 -16.11383 -15.94845 -15.76870 -15.45906 -15.17371 -14.97795 -14.60510 -14.47348 -14.33907 -14.09196 -13.92241 -13.77357 -13.55786 -13.26045 -13.06202 -12.94284 -12.87767 -12.55516 -12.22858 -12.21087 -12.04133 -11.91874 -11.84008 -11.82089 -11.74441 -11.39991 -11.07745 -10.95802 -10.66351 -10.36303 -9.90440 -5.24261 -1.15757 -0.40189 0.36057 0.50903 0.96397 1.00959 1.08584 1.30745 1.36111 1.64041 1.64094 1.89390 2.08470 2.86103 2.97951 3.04765 3.05846 3.12755 3.28431 3.40414 3.45686 3.49803 3.50777 3.59287 3.61326 3.72122 3.87124 4.03317 4.11122 4.11986 4.19059 4.25849 4.29157 4.37417 4.45536 4.51255 4.56236 4.59640 4.65606 4.68948 4.78694 4.89029 5.24821 5.32709 5.40684 5.67892 6.12490 6.36767 6.66546 6.92545 6.93313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.131 4.131 8 C 0.124 3.876 9 H 0.117 0.883 10 N -0.712 5.712 11 C 0.518 3.482 12 O -0.490 6.490 13 C 0.030 3.970 14 O -0.252 6.252 15 C 0.200 3.800 16 C -0.074 4.074 17 N 0.029 4.971 18 O -0.175 6.175 19 O -0.117 6.117 20 C 0.013 3.987 21 C -0.111 4.111 22 C -0.071 4.071 23 O -0.545 6.545 24 Si 0.691 3.309 25 C -0.032 4.032 26 C -0.207 4.207 27 C -0.123 4.123 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.101 0.899 32 H 0.088 0.912 33 H 0.403 0.597 34 H 0.103 0.897 35 H 0.103 0.897 36 H 0.166 0.834 37 H 0.083 0.917 38 H 0.388 0.612 39 H -0.251 1.251 40 H -0.247 1.247 41 H 0.140 0.860 42 H 0.156 0.844 43 H 0.086 0.914 44 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.119 -4.701 10.809 11.976 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.170 4.170 8 C 0.019 3.981 9 H 0.135 0.865 10 N -0.367 5.367 11 C 0.301 3.699 12 O -0.361 6.361 13 C -0.048 4.048 14 O -0.162 6.162 15 C 0.150 3.850 16 C -0.158 4.158 17 N 0.549 4.451 18 O -0.384 6.384 19 O -0.341 6.341 20 C -0.006 4.006 21 C -0.112 4.112 22 C -0.181 4.181 23 O -0.352 6.352 24 Si 0.591 3.409 25 C -0.049 4.049 26 C -0.226 4.226 27 C -0.161 4.161 28 H 0.122 0.878 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.119 0.881 32 H 0.107 0.893 33 H 0.238 0.762 34 H 0.121 0.879 35 H 0.121 0.879 36 H 0.184 0.816 37 H 0.101 0.899 38 H 0.236 0.764 39 H -0.176 1.176 40 H -0.172 1.172 41 H 0.157 0.843 42 H 0.174 0.826 43 H 0.105 0.895 44 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 0.878 -4.281 10.767 11.620 hybrid contribution -0.584 0.119 0.080 0.601 sum 0.294 -4.162 10.847 11.622 Atomic orbital electron populations 1.23331 0.75863 1.04046 1.02766 1.86513 1.23803 1.33338 1.83786 1.23541 0.91652 0.81462 0.72182 1.90696 1.66958 1.36413 1.44936 1.22713 0.87765 1.00975 1.01796 0.85737 1.23454 0.97784 1.01167 0.94608 1.21821 0.83034 0.96513 0.96734 0.86479 1.45456 1.07480 1.66136 1.17609 1.19798 0.83728 0.79402 0.86949 1.90881 1.84832 1.43651 1.16725 1.22719 0.85387 1.03595 0.93113 1.86500 1.13604 1.76832 1.39229 1.18635 0.84659 0.90306 0.91406 1.20575 0.95080 1.14948 0.85192 1.43303 1.00859 0.98952 1.01952 1.94553 1.29643 1.60669 1.53516 1.94696 1.14303 1.47675 1.77427 1.20810 0.95407 0.89160 0.95204 1.19250 0.95121 1.03044 0.93806 1.24642 0.93889 0.93503 1.06090 1.86490 1.41668 1.50839 1.56192 0.94635 0.89320 0.81917 0.75034 1.21112 0.91489 0.93168 0.99178 1.21199 1.00101 1.06760 0.94565 1.23362 0.96887 0.94895 1.00947 0.87829 0.91729 0.91674 0.88062 0.89326 0.76244 0.87948 0.87946 0.81606 0.89923 0.76357 1.17602 1.17166 0.84267 0.82607 0.89489 0.86697 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.28 10.56 -39.25 -0.41 -0.70 16 3 C 0.47 0.43 7.49 36.00 0.27 0.70 16 4 O -0.50 -1.95 15.65 -18.75 -0.29 -2.24 16 5 C -0.11 0.28 4.15 -90.81 -0.38 -0.10 16 6 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 7 C -0.13 0.28 7.45 -25.78 -0.19 0.08 16 8 C 0.12 -0.25 4.30 -67.11 -0.29 -0.54 16 9 H 0.12 -0.01 7.50 -51.93 -0.39 -0.40 16 10 N -0.71 2.34 5.26 -53.02 -0.28 2.06 16 11 C 0.52 0.04 7.91 -10.99 -0.09 -0.05 16 12 O -0.49 -2.79 16.12 -14.36 -0.23 -3.02 16 13 C 0.03 -0.08 5.22 36.00 0.19 0.11 16 14 O -0.25 -0.62 7.68 -49.78 -0.38 -1.01 16 15 C 0.20 0.31 6.67 -39.21 -0.26 0.05 16 16 C -0.07 -0.26 6.87 -79.80 -0.55 -0.81 16 17 N 0.03 0.20 4.45 34.03 0.15 0.35 16 18 O -0.17 -1.30 18.45 -29.46 -0.54 -1.84 16 19 O -0.12 -1.03 17.24 -36.49 -0.63 -1.66 16 20 C 0.01 0.02 9.11 -39.61 -0.36 -0.34 16 21 C -0.11 0.02 5.42 -104.60 -0.57 -0.54 16 22 C -0.07 0.18 2.81 36.01 0.10 0.28 16 23 O -0.54 1.02 12.74 -35.23 -0.45 0.57 16 24 Si 0.69 -2.73 29.78 -169.99 -5.06 -7.79 16 25 C -0.03 0.04 8.66 -39.61 -0.34 -0.30 16 26 C -0.21 0.37 9.04 -39.43 -0.36 0.01 16 27 C -0.12 0.33 7.15 -25.91 -0.19 0.15 16 28 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 29 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.10 -0.16 8.10 -51.92 -0.42 -0.58 16 32 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.40 -2.74 8.70 -40.82 -0.36 -3.10 16 34 H 0.10 -0.58 7.66 -51.92 -0.40 -0.98 16 35 H 0.10 -0.59 7.66 -51.93 -0.40 -0.99 16 36 H 0.17 0.18 7.61 -52.49 -0.40 -0.22 16 37 H 0.08 -0.35 7.96 -51.93 -0.41 -0.76 16 38 H 0.39 -2.63 8.74 45.56 0.40 -2.23 16 39 H -0.25 0.51 7.11 56.52 0.40 0.91 16 40 H -0.25 0.28 7.11 56.52 0.40 0.69 16 41 H 0.14 -0.41 4.87 -52.49 -0.26 -0.67 16 42 H 0.16 -0.88 6.30 -52.48 -0.33 -1.21 16 43 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 44 H 0.11 -0.14 7.43 -51.93 -0.39 -0.53 16 LS Contribution 386.34 15.07 5.82 5.82 Total: 0.00 -14.57 386.34 -9.33 -23.91 By element: Atomic # 1 Polarization: -9.11 SS G_CDS: -5.08 Total: -14.19 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -1.94 Total: -0.26 kcal Atomic # 7 Polarization: 2.54 SS G_CDS: -0.13 Total: 2.41 kcal Atomic # 8 Polarization: -6.95 SS G_CDS: -2.94 Total: -9.90 kcal Atomic # 14 Polarization: -2.73 SS G_CDS: -5.06 Total: -7.79 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -14.57 -9.33 -23.91 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4549638.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.913 kcal (2) G-P(sol) polarization free energy of solvation -14.571 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.906 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds