Wall clock time and date at job start Sat Mar 6 2021 16:05:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34237 * 116.99702 * 2 1 4 4 O 1.20824 * 119.99999 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99883 * 180.02562 * 3 2 1 6 6 H 1.09005 * 112.84888 * 311.19344 * 5 3 2 7 7 C 1.54049 * 113.62278 * 82.50186 * 5 3 2 8 8 C 1.53780 * 86.98511 * 139.97937 * 7 5 3 9 9 H 1.09002 * 113.61563 * 219.98501 * 8 7 5 10 10 N 1.46497 * 113.61441 * 89.16476 * 8 7 5 11 11 C 1.34776 * 120.00268 * 105.86462 * 10 8 7 12 12 O 1.21284 * 119.99692 * 359.97438 * 11 10 8 13 13 C 1.50695 * 120.00405 * 180.02562 * 11 10 8 14 14 O 1.42904 * 109.47463 * 179.97438 * 13 11 10 15 15 C 1.35974 * 116.99944 * 180.02562 * 14 13 11 16 16 C 1.38677 * 119.99987 * 179.97438 * 15 14 13 17 17 C 1.50701 * 119.99796 * 359.97438 * 16 15 14 18 18 O 1.42901 * 109.47286 * 285.00280 * 17 16 15 19 19 Si 1.86304 * 109.47194 * 165.00410 * 17 16 15 20 20 C 1.38155 * 120.00417 * 179.97438 * 16 15 14 21 21 C 1.38673 * 119.99563 * 0.02562 * 20 16 15 22 22 O 1.35984 * 119.99984 * 179.97438 * 21 20 16 23 23 C 1.42901 * 117.00089 * 180.02562 * 22 21 20 24 24 C 1.38717 * 120.00465 * 359.97438 * 21 20 16 25 25 C 1.38115 * 120.00013 * 359.97438 * 24 21 20 26 26 C 1.53774 * 87.17344 * 334.57164 * 8 7 5 27 27 H 1.09001 * 109.46903 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46533 * 299.99607 * 1 2 3 29 29 H 1.08993 * 109.47585 * 59.99417 * 1 2 3 30 30 H 1.09003 * 113.61285 * 25.47621 * 7 5 3 31 31 H 1.08996 * 113.69809 * 254.49768 * 7 5 3 32 32 H 0.97000 * 119.99840 * 285.86286 * 10 8 7 33 33 H 1.09005 * 109.47304 * 59.99603 * 13 11 10 34 34 H 1.09004 * 109.46867 * 300.00004 * 13 11 10 35 35 H 1.09003 * 109.47211 * 45.00335 * 17 16 15 36 36 H 0.96693 * 113.99989 * 180.02562 * 18 17 16 37 37 H 1.48506 * 109.99880 * 298.68167 * 19 17 16 38 38 H 1.48504 * 110.00068 * 59.99769 * 19 17 16 39 39 H 1.07999 * 120.00206 * 179.97438 * 20 16 15 40 40 H 1.09006 * 109.46831 * 180.02562 * 23 22 21 41 41 H 1.09003 * 109.47295 * 300.00278 * 23 22 21 42 42 H 1.08999 * 109.47033 * 60.00571 * 23 22 21 43 43 H 1.08000 * 120.00736 * 180.02562 * 24 21 20 44 44 H 1.07995 * 120.00219 * 179.74609 * 25 24 21 45 45 H 1.09004 * 113.61477 * 140.02139 * 26 8 7 46 46 H 1.09003 * 113.61962 * 270.92479 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2750 -0.0006 6 1 4.0239 0.6364 0.7550 7 6 4.1918 1.1237 -1.4002 8 6 5.1806 2.2272 -0.9885 9 1 5.3964 2.9394 -1.7849 10 7 6.3902 1.7182 -0.3374 11 6 7.5601 1.7030 -1.0064 12 8 7.6114 2.1103 -2.1476 13 6 8.8043 1.1789 -0.3368 14 8 9.9057 1.2657 -1.2432 15 6 11.1121 0.8297 -0.7922 16 6 12.2232 0.8850 -1.6203 17 6 12.0933 1.4277 -3.0202 18 8 11.4447 0.4601 -3.8480 19 14 13.7871 1.7943 -3.7038 20 6 13.4491 0.4426 -1.1620 21 6 13.5684 -0.0573 0.1260 22 8 14.7749 -0.4933 0.5770 23 6 14.8248 -0.9961 1.9137 24 6 12.4572 -0.1126 0.9544 25 6 11.2318 0.3306 0.4966 26 6 4.1077 2.7143 -0.0005 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3632 0.5138 0.8901 29 1 -0.3634 0.5139 -0.8898 30 1 3.5241 1.4159 -2.2108 31 1 4.6631 0.1551 -1.5670 32 1 6.3491 1.3921 0.5752 33 1 8.6516 0.1385 -0.0497 34 1 9.0167 1.7736 0.5517 35 1 11.5030 2.3439 -3.0014 36 1 11.3276 0.7426 -4.7653 37 1 14.4597 2.8227 -2.8700 38 1 14.6019 0.5531 -3.7346 39 1 14.3142 0.4852 -1.8070 40 1 15.8427 -1.3091 2.1464 41 1 14.5179 -0.2138 2.6079 42 1 14.1520 -1.8487 2.0065 43 1 12.5502 -0.5016 1.9576 44 1 10.3658 0.2838 1.1401 45 1 4.5111 3.0291 0.9620 46 1 3.4170 3.4407 -0.4290 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_4974302.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:18 Heat of formation + Delta-G solvation = -156.895346 kcal Electronic energy + Delta-G solvation = -30594.459539 eV Core-core repulsion = 26032.508707 eV Total energy + Delta-G solvation = -4561.950832 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.09075 -41.78564 -40.96322 -40.05765 -39.09661 -38.05561 -37.45205 -37.00620 -34.50675 -33.00560 -31.18303 -29.88553 -29.05311 -28.05955 -26.86482 -26.75779 -26.61984 -23.95927 -22.59306 -22.38001 -21.90409 -20.46395 -19.47814 -19.01499 -18.71006 -18.42513 -18.38451 -17.94760 -17.53078 -17.36887 -17.34719 -16.94527 -16.72105 -16.08507 -15.84882 -15.62594 -15.56447 -15.31923 -15.13414 -14.95271 -14.57587 -14.29108 -14.08736 -13.97117 -13.81538 -13.68605 -13.52998 -13.43735 -13.17407 -13.12982 -12.87216 -12.60924 -12.54546 -12.04826 -11.89075 -11.84607 -11.78879 -11.75926 -11.49756 -11.39605 -11.01942 -10.29357 -10.22680 -10.21486 -8.89918 -4.98850 -0.06461 0.24957 1.05769 1.26808 1.42075 1.43330 1.60236 1.72743 1.91943 2.22143 2.43309 2.54589 3.22220 3.30908 3.40253 3.49276 3.60866 3.66761 3.76057 3.80393 3.96213 4.00188 4.05649 4.06510 4.10734 4.17320 4.25175 4.27584 4.31949 4.34533 4.34901 4.47972 4.58250 4.62814 4.67517 4.68541 4.70175 4.79994 4.88407 4.90445 4.98605 5.03489 5.09598 5.32154 5.34144 5.44366 6.11585 6.32213 6.45184 6.64516 6.88598 7.12187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.467 3.533 4 O -0.539 6.539 5 C -0.104 4.104 6 H 0.157 0.843 7 C -0.130 4.130 8 C 0.125 3.875 9 H 0.093 0.907 10 N -0.692 5.692 11 C 0.519 3.481 12 O -0.563 6.563 13 C 0.032 3.968 14 O -0.304 6.304 15 C 0.106 3.894 16 C -0.091 4.091 17 C -0.072 4.072 18 O -0.560 6.560 19 Si 0.777 3.223 20 C -0.144 4.144 21 C 0.085 3.915 22 O -0.342 6.342 23 C 0.017 3.983 24 C -0.156 4.156 25 C -0.159 4.159 26 C -0.116 4.116 27 H 0.127 0.873 28 H 0.062 0.938 29 H 0.059 0.941 30 H 0.090 0.910 31 H 0.092 0.908 32 H 0.423 0.577 33 H 0.125 0.875 34 H 0.128 0.872 35 H 0.076 0.924 36 H 0.399 0.601 37 H -0.288 1.288 38 H -0.288 1.288 39 H 0.123 0.877 40 H 0.114 0.886 41 H 0.070 0.930 42 H 0.069 0.931 43 H 0.167 0.833 44 H 0.176 0.824 45 H 0.107 0.893 46 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.595 -2.503 6.298 6.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.311 3.689 4 O -0.429 6.429 5 C -0.123 4.123 6 H 0.174 0.826 7 C -0.169 4.169 8 C 0.019 3.981 9 H 0.111 0.889 10 N -0.346 5.346 11 C 0.305 3.695 12 O -0.440 6.440 13 C -0.045 4.045 14 O -0.217 6.217 15 C 0.061 3.939 16 C -0.091 4.091 17 C -0.181 4.181 18 O -0.369 6.369 19 Si 0.682 3.318 20 C -0.162 4.162 21 C 0.040 3.960 22 O -0.257 6.257 23 C -0.077 4.077 24 C -0.175 4.175 25 C -0.177 4.177 26 C -0.153 4.153 27 H 0.146 0.854 28 H 0.081 0.919 29 H 0.078 0.922 30 H 0.109 0.891 31 H 0.111 0.889 32 H 0.262 0.738 33 H 0.142 0.858 34 H 0.145 0.855 35 H 0.094 0.906 36 H 0.249 0.751 37 H -0.215 1.215 38 H -0.216 1.216 39 H 0.141 0.859 40 H 0.132 0.868 41 H 0.089 0.911 42 H 0.088 0.912 43 H 0.185 0.815 44 H 0.194 0.806 45 H 0.125 0.875 46 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.817 -2.187 5.905 6.350 hybrid contribution -0.812 -0.255 1.014 1.324 sum -1.629 -2.442 6.919 7.516 Atomic orbital electron populations 1.23514 0.75180 1.05554 1.02400 1.86524 1.24665 1.33303 1.83495 1.24190 0.92815 0.80942 0.70926 1.90677 1.67987 1.37476 1.46730 1.22862 0.85576 1.01617 1.02241 0.82583 1.23415 0.97546 1.01226 0.94685 1.21675 0.83545 0.96260 0.96628 0.88850 1.45290 1.06306 1.64781 1.18269 1.20444 0.85044 0.77856 0.86127 1.90778 1.86091 1.47416 1.19764 1.22777 0.83545 1.05122 0.93099 1.86178 1.14856 1.79554 1.41142 1.18727 0.84794 0.97301 0.93099 1.18689 0.91129 1.03522 0.95805 1.24701 1.09817 0.93981 0.89620 1.86435 1.81932 1.42825 1.25687 0.94408 0.72241 0.77259 0.87850 1.20128 0.96983 1.03635 0.95435 1.18933 0.85961 0.97719 0.93392 1.86071 1.28420 1.77419 1.33771 1.23389 1.05454 0.99335 0.79539 1.21439 0.91375 1.03295 1.01364 1.21491 0.99956 1.01838 0.94425 1.23276 0.96038 0.94529 1.01506 0.85433 0.91949 0.92239 0.89111 0.88929 0.73801 0.85770 0.85464 0.90575 0.75066 1.21501 1.21636 0.85919 0.86768 0.91099 0.91212 0.81550 0.80636 0.87478 0.88405 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.51 10.57 -51.49 -0.54 -1.05 16 3 C 0.47 0.91 7.49 71.23 0.53 1.45 16 4 O -0.54 -4.65 15.65 21.97 0.34 -4.31 16 5 C -0.10 0.59 4.15 -10.92 -0.05 0.54 16 6 H 0.16 -1.86 8.14 -2.38 -0.02 -1.88 16 7 C -0.13 0.53 7.45 31.21 0.23 0.76 16 8 C 0.12 -0.48 4.29 45.52 0.20 -0.28 16 9 H 0.09 0.12 7.50 -2.39 -0.02 0.10 16 10 N -0.69 4.84 5.26 -440.06 -2.32 2.53 16 11 C 0.52 0.32 7.91 87.66 0.69 1.01 16 12 O -0.56 -6.91 16.12 15.99 0.26 -6.65 16 13 C 0.03 -0.14 5.22 71.23 0.37 0.24 16 14 O -0.30 -1.94 9.00 -74.22 -0.67 -2.61 16 15 C 0.11 0.65 6.66 22.49 0.15 0.80 16 16 C -0.09 -0.88 5.30 -19.78 -0.10 -0.98 16 17 C -0.07 -0.50 2.36 71.24 0.17 -0.33 16 18 O -0.56 -4.18 12.86 -148.98 -1.92 -6.09 16 19 Si 0.78 2.65 30.20 68.60 2.07 4.73 16 20 C -0.14 -1.50 8.59 22.35 0.19 -1.30 16 21 C 0.08 0.60 6.69 22.49 0.15 0.75 16 22 O -0.34 -2.27 10.50 -93.38 -0.98 -3.25 16 23 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 24 C -0.16 -0.09 9.03 22.35 0.20 0.11 16 25 C -0.16 0.09 9.03 22.36 0.20 0.30 16 26 C -0.12 0.66 7.15 31.12 0.22 0.88 16 27 H 0.13 -0.93 8.14 -2.39 -0.02 -0.94 16 28 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 29 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 30 H 0.09 -0.18 8.10 -2.39 -0.02 -0.20 16 31 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 32 H 0.42 -6.41 8.70 -92.71 -0.81 -7.22 16 33 H 0.12 -1.29 7.66 -2.38 -0.02 -1.31 16 34 H 0.13 -1.43 7.66 -2.39 -0.02 -1.45 16 35 H 0.08 0.49 7.82 -2.39 -0.02 0.47 16 36 H 0.40 -1.03 8.74 -74.06 -0.65 -1.68 16 37 H -0.29 -2.48 7.11 99.48 0.71 -1.77 16 38 H -0.29 -2.78 6.75 99.48 0.67 -2.11 16 39 H 0.12 1.43 4.90 -2.91 -0.01 1.41 16 40 H 0.11 -0.69 8.14 -2.38 -0.02 -0.71 16 41 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 42 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 43 H 0.17 -1.04 6.29 -2.91 -0.02 -1.06 16 44 H 0.18 -1.71 6.29 -2.91 -0.02 -1.73 16 45 H 0.11 -1.02 8.14 -2.38 -0.02 -1.04 16 46 H 0.10 -0.16 7.44 -2.39 -0.02 -0.18 16 Total: 0.00 -34.67 389.09 1.31 -33.36 By element: Atomic # 1 Polarization: -22.39 SS G_CDS: -0.41 Total: -22.80 kcal Atomic # 6 Polarization: 0.67 SS G_CDS: 5.47 Total: 6.14 kcal Atomic # 7 Polarization: 4.84 SS G_CDS: -2.32 Total: 2.53 kcal Atomic # 8 Polarization: -20.45 SS G_CDS: -3.51 Total: -23.96 kcal Atomic # 14 Polarization: 2.65 SS G_CDS: 2.07 Total: 4.73 kcal Total: -34.67 1.31 -33.36 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4974302.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.535 kcal (2) G-P(sol) polarization free energy of solvation -34.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.360 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.895 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds