Wall clock time and date at job start Sat Mar 6 2021 16:05:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34235 * 116.99818 * 2 1 4 4 O 1.20820 * 119.99739 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99947 * 180.02562 * 3 2 1 6 6 H 1.09005 * 112.84658 * 311.19193 * 5 3 2 7 7 C 1.54049 * 113.61954 * 82.50376 * 5 3 2 8 8 C 1.53788 * 86.98078 * 139.97778 * 7 5 3 9 9 H 1.08997 * 113.61247 * 219.97579 * 8 7 5 10 10 N 1.46506 * 113.61213 * 89.16359 * 8 7 5 11 11 C 1.34777 * 119.99750 * 105.86181 * 10 8 7 12 12 O 1.21698 * 120.00166 * 355.17267 * 11 10 8 13 13 C 1.46677 * 119.99818 * 175.17775 * 11 10 8 14 14 C 1.37884 * 126.22320 * 5.10412 * 13 11 10 15 15 C 1.39880 * 107.09228 * 180.02562 * 14 13 11 16 16 Br 1.89096 * 126.07509 * 180.02562 * 15 14 13 17 17 C 1.35505 * 107.84812 * 0.02562 * 15 14 13 18 18 C 1.50700 * 125.56571 * 179.97438 * 17 15 14 19 19 O 1.42894 * 109.47501 * 66.67948 * 18 17 15 20 20 Si 1.86305 * 109.47205 * 306.67594 * 18 17 15 21 21 N 1.35592 * 108.85994 * 0.24167 * 17 15 14 22 22 C 1.46509 * 125.67661 * 179.75498 * 21 17 15 23 23 C 1.53774 * 87.17461 * 334.57110 * 8 7 5 24 24 H 1.08999 * 109.47118 * 299.99708 * 1 2 3 25 25 H 1.09002 * 109.47659 * 60.00002 * 1 2 3 26 26 H 1.09004 * 109.47030 * 179.97438 * 1 2 3 27 27 H 1.08998 * 113.61099 * 25.47825 * 7 5 3 28 28 H 1.08998 * 113.69612 * 254.49330 * 7 5 3 29 29 H 0.96998 * 119.99737 * 285.86029 * 10 8 7 30 30 H 1.08003 * 126.45523 * 0.02562 * 14 13 11 31 31 H 1.09005 * 109.46739 * 186.67783 * 18 17 15 32 32 H 0.96702 * 113.99678 * 299.99947 * 19 18 17 33 33 H 1.48502 * 109.99678 * 184.93706 * 20 18 17 34 34 H 1.48504 * 110.00001 * 306.25445 * 20 18 17 35 35 H 1.08993 * 109.47360 * 95.69107 * 22 21 17 36 36 H 1.08997 * 109.47148 * 215.69480 * 22 21 17 37 37 H 1.09000 * 109.46975 * 335.69021 * 22 21 17 38 38 H 1.08998 * 113.61272 * 140.02227 * 23 8 7 39 39 H 1.09001 * 113.61766 * 270.84042 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 4.0238 0.6363 0.7550 7 6 4.1917 1.1237 -1.4002 8 6 5.1805 2.2272 -0.9885 9 1 5.3963 2.9394 -1.7849 10 7 6.3902 1.7181 -0.3374 11 6 7.5601 1.7030 -1.0064 12 8 7.5951 2.0292 -2.1783 13 6 8.7910 1.2932 -0.3221 14 6 8.8847 0.8074 0.9649 15 6 10.2370 0.5451 1.2079 16 35 10.9677 -0.1396 2.8120 17 6 10.9303 0.8689 0.0897 18 6 12.4220 0.7431 -0.0840 19 8 12.7889 -0.6378 -0.0665 20 14 13.2863 1.6330 1.3059 21 7 10.0635 1.3301 -0.8454 22 6 10.4212 1.7878 -2.1904 23 6 4.1076 2.7143 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.5240 1.4159 -2.2107 28 1 4.6630 0.1551 -1.5671 29 1 6.3491 1.3920 0.5752 30 1 8.0678 0.6575 1.6553 31 1 12.7154 1.1849 -1.0363 32 1 12.5574 -1.0958 0.7531 33 1 14.7544 1.6186 1.0830 34 1 12.7995 3.0333 1.3929 35 1 10.2899 0.9703 -2.8992 36 1 9.7783 2.6211 -2.4736 37 1 11.4617 2.1125 -2.1989 38 1 4.5110 3.0290 0.9620 39 1 3.4178 3.4417 -0.4285 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_5000100.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:26 Heat of formation + Delta-G solvation = -66.474752 kcal Electronic energy + Delta-G solvation = -25601.572394 eV Core-core repulsion = 21559.426723 eV Total energy + Delta-G solvation = -4042.145671 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.040 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.94282 -41.98977 -40.68433 -39.08323 -37.86469 -37.34919 -35.07160 -34.19130 -32.27652 -31.07140 -29.49363 -27.66411 -27.48565 -27.00440 -26.39711 -23.68863 -22.55383 -21.69956 -20.75026 -20.35844 -19.23489 -18.80220 -18.20738 -17.84609 -17.42228 -17.26090 -17.14930 -16.66544 -16.04778 -15.75781 -15.70783 -15.19450 -15.00347 -14.84632 -14.64628 -14.44764 -14.26648 -14.03249 -13.91005 -13.79249 -13.54375 -13.33920 -13.21759 -12.90817 -12.60052 -12.32508 -12.01414 -11.99014 -11.88651 -11.80690 -11.60017 -11.36567 -11.18064 -10.83806 -10.34593 -9.90501 -9.37965 -4.96078 0.11141 0.41720 0.88078 1.12008 1.15035 1.42108 1.63138 1.67810 1.90347 2.09896 2.12931 3.08569 3.14815 3.17206 3.36586 3.42233 3.53068 3.57635 3.64275 3.79887 3.92000 4.05101 4.13989 4.19728 4.21839 4.31590 4.32264 4.47674 4.49419 4.52720 4.54961 4.59256 4.65273 4.72674 4.83449 5.17900 5.32458 5.36127 5.51826 5.72084 6.22557 6.30768 6.70123 6.94966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.131 4.131 8 C 0.126 3.874 9 H 0.115 0.885 10 N -0.702 5.702 11 C 0.597 3.403 12 O -0.536 6.536 13 C -0.038 4.038 14 C -0.102 4.102 15 C -0.178 4.178 16 Br 0.019 6.981 17 C 0.061 3.939 18 C -0.050 4.050 19 O -0.528 6.528 20 Si 0.659 3.341 21 N -0.386 5.386 22 C 0.064 3.936 23 C -0.124 4.124 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.103 0.897 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.405 0.595 30 H 0.159 0.841 31 H 0.117 0.883 32 H 0.380 0.620 33 H -0.237 1.237 34 H -0.247 1.247 35 H 0.088 0.912 36 H 0.105 0.895 37 H 0.086 0.914 38 H 0.088 0.912 39 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.728 -1.835 3.025 3.612 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.144 0.856 7 C -0.170 4.170 8 C 0.020 3.980 9 H 0.133 0.867 10 N -0.353 5.353 11 C 0.384 3.616 12 O -0.413 6.413 13 C -0.152 4.152 14 C -0.129 4.129 15 C -0.263 4.263 16 Br 0.103 6.897 17 C -0.061 4.061 18 C -0.161 4.161 19 O -0.333 6.333 20 Si 0.556 3.444 21 N -0.059 5.059 22 C -0.076 4.076 23 C -0.162 4.162 24 H 0.083 0.917 25 H 0.083 0.917 26 H 0.122 0.878 27 H 0.118 0.882 28 H 0.107 0.893 29 H 0.241 0.759 30 H 0.176 0.824 31 H 0.134 0.866 32 H 0.229 0.771 33 H -0.160 1.160 34 H -0.170 1.170 35 H 0.107 0.893 36 H 0.124 0.876 37 H 0.105 0.895 38 H 0.106 0.894 39 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 0.141 -0.583 2.001 2.088 hybrid contribution -0.916 -0.103 -0.461 1.031 sum -0.775 -0.685 1.539 1.855 Atomic orbital electron populations 1.23326 0.75919 1.04030 1.02726 1.86521 1.23749 1.33320 1.83772 1.23544 0.91648 0.81446 0.72129 1.90689 1.66963 1.36435 1.45005 1.22712 0.87745 1.00964 1.01812 0.85588 1.23448 0.97731 1.01213 0.94609 1.21807 0.83115 0.96431 0.96601 0.86723 1.45284 1.07177 1.65150 1.17700 1.16799 0.82062 0.77105 0.85607 1.90852 1.86379 1.48696 1.15392 1.19977 0.85566 1.14682 0.94973 1.21175 0.95446 1.02067 0.94246 1.20663 0.95629 1.16234 0.93818 1.96599 1.81032 1.84225 1.27808 1.20965 0.93544 1.02730 0.88885 1.24777 0.89618 0.90239 1.11424 1.86539 1.82919 1.20125 1.43731 0.93785 0.80669 0.82223 0.87717 1.43800 1.04842 1.45013 1.12246 1.22392 1.02814 1.02781 0.79661 1.23364 0.96819 0.94924 1.01058 0.91715 0.91745 0.87842 0.88177 0.89273 0.75878 0.82358 0.86576 0.77144 1.16016 1.17035 0.89342 0.87632 0.89510 0.89356 0.86731 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.55 101.05 1.07 1.04 16 2 O -0.36 -0.32 10.57 -39.27 -0.41 -0.73 16 3 C 0.47 0.48 7.49 36.01 0.27 0.75 16 4 O -0.50 -1.96 15.65 -18.75 -0.29 -2.26 16 5 C -0.11 0.25 4.15 -90.82 -0.38 -0.13 16 6 H 0.13 -0.53 8.14 -51.93 -0.42 -0.95 16 7 C -0.13 0.27 7.45 -25.77 -0.19 0.07 16 8 C 0.13 -0.24 4.26 -67.12 -0.29 -0.53 16 9 H 0.11 -0.07 7.56 -51.93 -0.39 -0.46 16 10 N -0.70 1.50 5.25 -54.32 -0.29 1.21 16 11 C 0.60 0.53 7.77 -12.85 -0.10 0.44 16 12 O -0.54 -2.08 14.54 5.19 0.08 -2.01 16 13 C -0.04 -0.02 6.88 -81.98 -0.56 -0.59 16 14 C -0.10 0.09 10.34 -39.10 -0.40 -0.31 16 15 C -0.18 0.02 6.06 -39.94 -0.24 -0.22 16 16 Br 0.02 -0.03 29.39 -68.01 -2.00 -2.03 16 17 C 0.06 0.04 5.50 -81.91 -0.45 -0.41 16 18 C -0.05 -0.01 2.83 36.01 0.10 0.09 16 19 O -0.53 -0.47 12.88 -35.23 -0.45 -0.93 16 20 Si 0.66 0.05 29.49 -169.99 -5.01 -4.96 16 21 N -0.39 -0.41 3.16 -115.59 -0.37 -0.78 16 22 C 0.06 -0.03 10.15 59.85 0.61 0.58 16 23 C -0.12 0.31 7.14 -25.92 -0.19 0.13 16 24 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 27 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 28 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.41 -1.89 7.60 -40.82 -0.31 -2.20 16 30 H 0.16 -0.62 7.45 -52.48 -0.39 -1.01 16 31 H 0.12 -0.06 6.32 -51.93 -0.33 -0.39 16 32 H 0.38 -0.59 7.36 45.56 0.34 -0.26 16 33 H -0.24 -0.52 7.11 56.52 0.40 -0.12 16 34 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 35 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.11 0.02 6.80 -51.93 -0.35 -0.33 16 37 H 0.09 -0.20 6.66 -51.93 -0.35 -0.54 16 38 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.11 -0.15 7.44 -51.93 -0.39 -0.54 16 LS Contribution 347.99 15.07 5.24 5.24 Total: 0.00 -8.40 347.99 -9.01 -17.41 By element: Atomic # 1 Polarization: -6.33 SS G_CDS: -4.75 Total: -11.08 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -0.76 Total: 0.90 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.65 Total: 0.44 kcal Atomic # 8 Polarization: -4.84 SS G_CDS: -1.09 Total: -5.92 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.01 Total: -4.96 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.00 Total: -2.03 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -8.40 -9.01 -17.41 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_5000100.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.063 kcal (2) G-P(sol) polarization free energy of solvation -8.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.412 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds