Wall clock time and date at job start Sat Mar 6 2021 16:05:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34232 * 116.99905 * 2 1 4 4 O 1.20825 * 119.99711 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99958 * 180.02562 * 3 2 1 6 6 H 1.09006 * 112.85031 * 48.79921 * 5 3 2 7 7 C 1.53779 * 113.61370 * 180.02562 * 5 3 2 8 8 C 1.53789 * 87.07997 * 140.06166 * 7 5 3 9 9 H 1.08993 * 113.61301 * 219.93100 * 8 7 5 10 10 N 1.46499 * 113.61016 * 89.11745 * 8 7 5 11 11 C 1.34778 * 120.00200 * 155.00073 * 10 8 7 12 12 O 1.21282 * 119.99301 * 359.97438 * 11 10 8 13 13 C 1.50696 * 120.00565 * 179.97438 * 11 10 8 14 14 O 1.42900 * 109.47587 * 180.02562 * 13 11 10 15 15 C 1.35992 * 117.00153 * 180.02562 * 14 13 11 16 16 C 1.39150 * 120.06970 * 180.02562 * 15 14 13 17 17 O 1.35996 * 120.07889 * 359.97438 * 16 15 14 18 18 C 1.42899 * 117.00293 * 179.97438 * 17 16 15 19 19 C 1.38571 * 119.85411 * 179.74514 * 16 15 14 20 20 C 1.38245 * 119.99627 * 0.48697 * 19 16 15 21 21 C 1.50699 * 119.92829 * 179.76626 * 20 19 16 22 22 O 1.42892 * 109.47249 * 299.72665 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 179.72051 * 21 20 19 24 24 C 1.38261 * 120.14526 * 359.49022 * 20 19 16 25 25 C 1.38242 * 120.14306 * 0.27615 * 24 20 19 26 26 C 1.53778 * 87.08096 * 334.56984 * 8 7 5 27 27 H 1.08999 * 109.47055 * 299.99362 * 1 2 3 28 28 H 1.08995 * 109.47558 * 60.00216 * 1 2 3 29 29 H 1.08999 * 109.46976 * 179.97438 * 1 2 3 30 30 H 1.08995 * 113.61232 * 25.51812 * 7 5 3 31 31 H 1.08994 * 113.61408 * 254.61200 * 7 5 3 32 32 H 0.97002 * 120.00171 * 334.99683 * 10 8 7 33 33 H 1.09003 * 109.46695 * 59.99761 * 13 11 10 34 34 H 1.08998 * 109.47031 * 299.99915 * 13 11 10 35 35 H 1.09001 * 109.46861 * 60.00634 * 18 17 16 36 36 H 1.09003 * 109.46876 * 179.97438 * 18 17 16 37 37 H 1.08996 * 109.47152 * 299.99846 * 18 17 16 38 38 H 1.07991 * 120.00227 * 180.23274 * 19 16 15 39 39 H 1.09004 * 109.46453 * 59.72733 * 21 20 19 40 40 H 0.96703 * 114.00176 * 299.99748 * 22 21 20 41 41 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 42 42 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 43 43 H 1.07997 * 119.92489 * 180.25219 * 24 20 19 44 44 H 1.07998 * 119.99373 * 179.97438 * 25 24 20 45 45 H 1.08999 * 113.61413 * 139.97841 * 26 8 7 46 46 H 1.08998 * 113.61186 * 270.87715 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0234 0.6365 -0.7567 7 6 4.1077 2.7142 0.0001 8 6 5.1828 2.2257 0.9853 9 1 5.4003 2.9368 1.7821 10 7 6.3909 1.7176 0.3309 11 6 7.5685 1.7300 0.9865 12 8 7.6278 2.1622 2.1181 13 6 8.8112 1.2068 0.3136 14 8 9.9216 1.3252 1.2052 15 6 11.1284 0.8952 0.7490 16 6 12.2527 0.9803 1.5645 17 8 12.1473 1.4941 2.8192 18 6 13.3429 1.5501 3.5999 19 6 13.4791 0.5359 1.0970 20 6 13.5856 0.0187 -0.1807 21 6 14.9212 -0.4593 -0.6894 22 8 15.8500 0.6266 -0.6822 23 14 14.7299 -1.1016 -2.4276 24 6 12.4684 -0.0663 -0.9907 25 6 11.2410 0.3709 -0.5286 26 6 4.1936 1.1219 1.3951 27 1 -0.3633 0.5137 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 3.4180 3.4399 0.4311 31 1 4.5090 3.0302 -0.9627 32 1 6.3435 1.3721 -0.5743 33 1 9.0064 1.7854 -0.5893 34 1 8.6678 0.1590 0.0498 35 1 14.0806 2.1701 3.0906 36 1 13.1194 1.9801 4.5763 37 1 13.7405 0.5434 3.7282 38 1 14.3525 0.5973 1.7292 39 1 15.2905 -1.2577 -0.0456 40 1 15.5851 1.3744 -1.2351 41 1 14.1967 -0.0315 -3.3087 42 1 16.0400 -1.5766 -2.9407 43 1 12.5549 -0.4746 -1.9867 44 1 10.3700 0.3038 -1.1635 45 1 4.6643 0.1524 1.5584 46 1 3.5274 1.4122 2.2075 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_60476.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:29 Heat of formation + Delta-G solvation = -154.713807 kcal Electronic energy + Delta-G solvation = -30335.252199 eV Core-core repulsion = 25773.395965 eV Total energy + Delta-G solvation = -4561.856233 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.09973 -41.74958 -40.89889 -39.69256 -38.98767 -38.73103 -37.35419 -37.00723 -34.51885 -32.07023 -31.47769 -30.04579 -29.15376 -28.43882 -27.00150 -26.90121 -26.18472 -23.74664 -22.74371 -22.44372 -21.90460 -20.52916 -19.82953 -18.98550 -18.58689 -18.31081 -17.99272 -17.77725 -17.53864 -17.39677 -17.09551 -16.94859 -16.62994 -16.17096 -15.98590 -15.82692 -15.69438 -15.50174 -15.13163 -14.99216 -14.67199 -14.29965 -14.27005 -13.86372 -13.75894 -13.61943 -13.53490 -13.42630 -13.20832 -12.90371 -12.63519 -12.56227 -12.21807 -12.16392 -12.01836 -11.97952 -11.87847 -11.81318 -11.67708 -11.36329 -10.94731 -10.65348 -10.28632 -9.79794 -8.87386 -4.99936 0.15696 0.28180 1.11686 1.24487 1.35048 1.42840 1.56048 1.67406 1.92945 2.30619 2.45827 2.55031 3.09329 3.18163 3.31465 3.38174 3.53064 3.60459 3.64081 3.73145 3.76921 3.88008 3.91145 3.91973 4.11039 4.13440 4.21329 4.24228 4.28458 4.33034 4.34131 4.49275 4.51427 4.54718 4.56107 4.59559 4.64550 4.65444 4.72774 4.84242 4.98375 5.08285 5.32807 5.35121 5.35562 5.53690 5.93704 6.23938 6.36372 6.52848 6.69610 7.03626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.124 4.124 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.713 5.713 11 C 0.519 3.481 12 O -0.504 6.504 13 C 0.039 3.961 14 O -0.277 6.277 15 C 0.104 3.896 16 C 0.107 3.893 17 O -0.301 6.301 18 C 0.025 3.975 19 C -0.146 4.146 20 C -0.113 4.113 21 C -0.073 4.073 22 O -0.530 6.530 23 Si 0.686 3.314 24 C -0.113 4.113 25 C -0.169 4.169 26 C -0.132 4.132 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.114 0.886 31 H 0.087 0.913 32 H 0.403 0.597 33 H 0.095 0.905 34 H 0.096 0.904 35 H 0.056 0.944 36 H 0.103 0.897 37 H 0.056 0.944 38 H 0.141 0.859 39 H 0.119 0.881 40 H 0.376 0.624 41 H -0.260 1.260 42 H -0.257 1.257 43 H 0.133 0.867 44 H 0.140 0.860 45 H 0.088 0.912 46 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.249 -4.388 -4.375 6.321 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.018 3.982 9 H 0.134 0.866 10 N -0.367 5.367 11 C 0.304 3.696 12 O -0.376 6.376 13 C -0.040 4.040 14 O -0.189 6.189 15 C 0.059 3.941 16 C 0.061 3.939 17 O -0.215 6.215 18 C -0.070 4.070 19 C -0.165 4.165 20 C -0.114 4.114 21 C -0.183 4.183 22 O -0.337 6.337 23 Si 0.587 3.413 24 C -0.131 4.131 25 C -0.188 4.188 26 C -0.171 4.171 27 H 0.083 0.917 28 H 0.083 0.917 29 H 0.122 0.878 30 H 0.132 0.868 31 H 0.105 0.895 32 H 0.238 0.762 33 H 0.113 0.887 34 H 0.114 0.886 35 H 0.075 0.925 36 H 0.121 0.879 37 H 0.075 0.925 38 H 0.158 0.842 39 H 0.136 0.864 40 H 0.224 0.776 41 H -0.184 1.184 42 H -0.183 1.183 43 H 0.150 0.850 44 H 0.157 0.843 45 H 0.107 0.893 46 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.076 -3.918 -3.652 5.464 hybrid contribution 0.104 0.822 -0.645 1.050 sum -0.972 -3.096 -4.297 5.385 Atomic orbital electron populations 1.23327 0.75907 1.04032 1.02740 1.86518 1.23765 1.33345 1.83793 1.23556 0.91667 0.81444 0.72147 1.90693 1.66962 1.36433 1.44964 1.22662 0.87699 1.01016 1.01831 0.85661 1.23371 0.96909 0.94855 1.01049 1.21799 0.83212 0.96461 0.96684 0.86595 1.45481 1.07104 1.65490 1.18638 1.20041 0.83939 0.78950 0.86662 1.90812 1.85312 1.43800 1.17719 1.22464 0.85323 1.02814 0.93413 1.86277 1.13502 1.79141 1.39992 1.18271 0.84120 0.99370 0.92385 1.18283 0.91594 0.98318 0.85671 1.86249 1.34785 1.77724 1.22699 1.23133 0.86485 1.01808 0.95595 1.20941 0.95855 1.02621 0.97106 1.19991 0.95661 1.01443 0.94304 1.25012 0.87796 0.92849 1.12597 1.86594 1.47206 1.28854 1.71006 0.95005 0.84437 0.87528 0.74300 1.20687 0.91840 1.00942 0.99610 1.20984 0.99400 1.04046 0.94385 1.23406 0.97790 1.01211 0.94656 0.91713 0.91735 0.87836 0.86813 0.89471 0.76179 0.88697 0.88573 0.92532 0.87857 0.92499 0.84164 0.86368 0.77597 1.18437 1.18253 0.84995 0.84276 0.89307 0.88179 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.28 10.57 -39.26 -0.41 -0.69 16 3 C 0.47 0.45 7.49 36.00 0.27 0.72 16 4 O -0.50 -1.97 15.65 -18.75 -0.29 -2.27 16 5 C -0.11 0.27 4.13 -90.96 -0.38 -0.11 16 6 H 0.13 -0.58 8.14 -51.93 -0.42 -1.01 16 7 C -0.12 0.31 7.15 -25.92 -0.19 0.12 16 8 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 9 H 0.12 0.01 7.46 -51.93 -0.39 -0.37 16 10 N -0.71 2.01 5.26 -53.02 -0.28 1.73 16 11 C 0.52 0.34 7.91 -10.99 -0.09 0.25 16 12 O -0.50 -3.04 16.10 -14.35 -0.23 -3.27 16 13 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 14 O -0.28 -0.90 9.45 -47.34 -0.45 -1.35 16 15 C 0.10 0.22 6.70 -39.13 -0.26 -0.04 16 16 C 0.11 0.32 6.70 -39.12 -0.26 0.05 16 17 O -0.30 -1.22 10.28 -34.23 -0.35 -1.57 16 18 C 0.02 0.00 9.81 101.05 0.99 0.99 16 19 C -0.15 -0.17 8.60 -39.46 -0.34 -0.51 16 20 C -0.11 0.00 5.39 -104.61 -0.56 -0.56 16 21 C -0.07 0.05 2.82 36.01 0.10 0.15 16 22 O -0.53 -0.44 12.77 -35.23 -0.45 -0.89 16 23 Si 0.69 -1.10 29.78 -169.99 -5.06 -6.16 16 24 C -0.11 0.12 8.66 -39.57 -0.34 -0.22 16 25 C -0.17 0.14 9.04 -39.46 -0.36 -0.21 16 26 C -0.13 0.27 7.43 -25.92 -0.19 0.08 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 29 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 30 H 0.11 -0.12 7.44 -51.93 -0.39 -0.51 16 31 H 0.09 -0.32 8.14 -51.93 -0.42 -0.75 16 32 H 0.40 -2.52 8.70 -40.82 -0.36 -2.88 16 33 H 0.10 -0.41 7.66 -51.93 -0.40 -0.81 16 34 H 0.10 -0.44 7.67 -51.93 -0.40 -0.83 16 35 H 0.06 -0.05 7.67 -51.93 -0.40 -0.44 16 36 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.06 -0.06 7.65 -51.93 -0.40 -0.46 16 38 H 0.14 0.04 6.30 -52.49 -0.33 -0.29 16 39 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 40 H 0.38 -0.71 8.70 45.56 0.40 -0.31 16 41 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 42 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 43 H 0.13 -0.42 4.87 -52.49 -0.26 -0.68 16 44 H 0.14 -0.57 6.30 -52.49 -0.33 -0.90 16 45 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 46 H 0.10 -0.16 8.10 -51.93 -0.42 -0.58 16 LS Contribution 389.46 15.07 5.87 5.87 Total: 0.00 -12.71 389.46 -8.53 -21.25 By element: Atomic # 1 Polarization: -7.77 SS G_CDS: -6.23 Total: -14.00 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -0.64 Total: 1.36 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -0.28 Total: 1.73 kcal Atomic # 8 Polarization: -7.85 SS G_CDS: -2.19 Total: -10.04 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.06 Total: -6.16 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -12.71 -8.53 -21.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_60476.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.468 kcal (2) G-P(sol) polarization free energy of solvation -12.714 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds