Wall clock time and date at job start Sat Mar 6 2021 16:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34233 * 117.00346 * 2 1 4 4 O 1.20828 * 119.99577 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00172 * 179.97438 * 3 2 1 6 6 H 1.09004 * 112.84479 * 48.80723 * 5 3 2 7 7 C 1.53778 * 113.61086 * 179.97438 * 5 3 2 8 8 C 1.53787 * 87.08035 * 140.06661 * 7 5 3 9 9 H 1.08994 * 113.61447 * 220.02014 * 8 7 5 10 10 N 1.46496 * 113.61210 * 89.11438 * 8 7 5 11 11 C 1.34774 * 120.00099 * 155.00440 * 10 8 7 12 12 O 1.21282 * 120.00036 * 359.97438 * 11 10 8 13 13 C 1.50698 * 120.00600 * 180.02562 * 11 10 8 14 14 O 1.42900 * 109.47675 * 179.97438 * 13 11 10 15 15 C 1.35912 * 117.00165 * 180.02562 * 14 13 11 16 16 C 1.38789 * 120.05811 * 179.72405 * 15 14 13 17 17 Br 1.89103 * 120.03489 * 0.02562 * 16 15 14 18 18 C 1.38245 * 119.92863 * 179.80848 * 16 15 14 19 19 C 1.38240 * 120.04016 * 0.44044 * 18 16 15 20 20 C 1.50704 * 119.93672 * 179.76380 * 19 18 16 21 21 O 1.42899 * 109.47355 * 245.02316 * 20 19 18 22 22 Si 1.86303 * 109.47034 * 5.02698 * 20 19 18 23 23 C 1.38284 * 120.12471 * 359.78987 * 19 18 16 24 24 C 1.38143 * 120.06617 * 0.02562 * 23 19 18 25 25 C 1.53778 * 113.69101 * 277.53681 * 5 3 2 26 26 H 1.08996 * 109.47063 * 59.99778 * 1 2 3 27 27 H 1.08998 * 109.46979 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46670 * 299.99840 * 1 2 3 29 29 H 1.08998 * 113.61879 * 25.52144 * 7 5 3 30 30 H 1.08999 * 113.61887 * 254.61251 * 7 5 3 31 31 H 0.97002 * 120.00490 * 335.00104 * 10 8 7 32 32 H 1.09005 * 109.46821 * 300.00153 * 13 11 10 33 33 H 1.09008 * 109.47008 * 59.99541 * 13 11 10 34 34 H 1.07995 * 119.97789 * 180.18374 * 18 16 15 35 35 H 1.09008 * 109.47066 * 125.02179 * 20 19 18 36 36 H 0.96700 * 113.99973 * 180.02562 * 21 20 19 37 37 H 1.48504 * 109.99723 * 178.67984 * 22 20 19 38 38 H 1.48500 * 109.99817 * 299.99311 * 22 20 19 39 39 H 1.07999 * 119.96597 * 179.97438 * 23 19 18 40 40 H 1.07997 * 120.01841 * 180.02562 * 24 23 19 41 41 H 1.08993 * 113.61229 * 105.46294 * 25 5 3 42 42 H 1.09000 * 113.61263 * 334.55944 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0239 0.6361 -0.7550 7 6 4.1078 2.7141 -0.0001 8 6 5.1821 2.2269 0.9865 9 1 5.3979 2.9384 1.7835 10 7 6.3908 1.7179 0.3337 11 6 7.5677 1.7310 0.9902 12 8 7.6263 2.1647 2.1213 13 6 8.8112 1.2080 0.3186 14 8 9.9211 1.3284 1.2106 15 6 11.1277 0.8990 0.7558 16 6 12.2497 0.9917 1.5675 17 35 12.1013 1.7150 3.3084 18 6 13.4749 0.5504 1.1036 19 6 13.5844 0.0259 -0.1707 20 6 14.9223 -0.4495 -0.6760 21 8 15.3368 0.3703 -1.7705 22 14 16.1791 -0.3377 0.6947 23 6 12.4687 -0.0629 -0.9829 24 6 11.2413 0.3730 -0.5228 25 6 4.1926 1.1230 1.3969 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 3.4178 3.4404 0.4294 30 1 4.5100 3.0290 -0.9630 31 1 6.3440 1.3713 -0.5711 32 1 8.6684 0.1600 0.0551 33 1 9.0069 1.7862 -0.5846 34 1 14.3479 0.6194 1.7356 35 1 14.8383 -1.4843 -1.0084 36 1 16.1919 0.1209 -2.1469 37 1 17.4954 -0.8336 0.2184 38 1 16.3030 1.0681 1.1567 39 1 12.5572 -0.4728 -1.9781 40 1 10.3704 0.3029 -1.1576 41 1 4.6631 0.1537 1.5613 42 1 3.5257 1.4140 2.2084 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_6201210.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:32 Heat of formation + Delta-G solvation = -114.845909 kcal Electronic energy + Delta-G solvation = -27956.921325 eV Core-core repulsion = 23531.195701 eV Total energy + Delta-G solvation = -4425.725623 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.045 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.11790 -41.62014 -40.79425 -39.53889 -38.77195 -37.45860 -37.33686 -34.56150 -33.48765 -32.28337 -30.58982 -29.91510 -29.17376 -27.02821 -26.97330 -26.30940 -24.15967 -22.72560 -22.31488 -21.93272 -20.55233 -19.60985 -19.03881 -18.64454 -18.34535 -17.87712 -17.57875 -17.42434 -17.19688 -17.05279 -16.77275 -16.11583 -15.86412 -15.65565 -15.38338 -15.09530 -14.86272 -14.53511 -14.37215 -14.21667 -14.06852 -13.97502 -13.76118 -13.72594 -13.52568 -13.22590 -12.91768 -12.53897 -12.36745 -12.20728 -11.99945 -11.89765 -11.83661 -11.82246 -11.71091 -11.37720 -11.03586 -10.99166 -10.57859 -10.31832 -9.98792 -9.29447 -5.02392 -0.03180 0.05906 0.73084 1.10480 1.19631 1.24609 1.37842 1.53215 1.66194 1.89902 2.32337 2.35390 3.07485 3.16275 3.20916 3.30724 3.49959 3.57458 3.62479 3.66490 3.68513 3.79330 3.85692 3.89768 4.01907 4.12669 4.20550 4.23628 4.29504 4.32289 4.47704 4.53727 4.56466 4.58196 4.63078 4.70939 4.76108 4.82113 4.97341 5.26426 5.29267 5.34545 5.38931 5.96593 6.21081 6.34588 6.68511 6.98567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.124 3.876 9 H 0.117 0.883 10 N -0.712 5.712 11 C 0.520 3.480 12 O -0.501 6.501 13 C 0.037 3.963 14 O -0.274 6.274 15 C 0.161 3.839 16 C -0.118 4.118 17 Br -0.023 7.023 18 C -0.048 4.048 19 C -0.104 4.104 20 C -0.068 4.068 21 O -0.536 6.536 22 Si 0.674 3.326 23 C -0.034 4.034 24 C -0.204 4.204 25 C -0.132 4.132 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.064 0.936 29 H 0.114 0.886 30 H 0.087 0.913 31 H 0.403 0.597 32 H 0.099 0.901 33 H 0.098 0.902 34 H 0.143 0.857 35 H 0.080 0.920 36 H 0.381 0.619 37 H -0.257 1.257 38 H -0.251 1.251 39 H 0.136 0.864 40 H 0.140 0.860 41 H 0.088 0.912 42 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.441 -6.068 -4.855 7.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.019 3.981 9 H 0.135 0.865 10 N -0.367 5.367 11 C 0.304 3.696 12 O -0.373 6.373 13 C -0.041 4.041 14 O -0.185 6.185 15 C 0.113 3.887 16 C -0.199 4.199 17 Br 0.063 6.937 18 C -0.067 4.067 19 C -0.105 4.105 20 C -0.178 4.178 21 O -0.344 6.344 22 Si 0.574 3.426 23 C -0.053 4.053 24 C -0.224 4.224 25 C -0.170 4.170 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.132 0.868 30 H 0.105 0.895 31 H 0.238 0.762 32 H 0.117 0.883 33 H 0.116 0.884 34 H 0.160 0.840 35 H 0.097 0.903 36 H 0.229 0.771 37 H -0.182 1.182 38 H -0.175 1.175 39 H 0.154 0.846 40 H 0.157 0.843 41 H 0.107 0.893 42 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.535 -4.443 -2.749 5.252 hybrid contribution 0.053 -0.300 -2.383 2.402 sum -0.482 -4.743 -5.132 7.004 Atomic orbital electron populations 1.23329 0.75889 1.04038 1.02750 1.86517 1.23779 1.33342 1.83793 1.23553 0.91663 0.81452 0.72162 1.90695 1.66961 1.36426 1.44946 1.22661 0.87729 1.01011 1.01816 0.85693 1.23372 0.96909 0.94871 1.01037 1.21812 0.83146 0.96473 0.96697 0.86536 1.45468 1.07109 1.65390 1.18684 1.19966 0.83884 0.79076 0.86681 1.90822 1.85262 1.43651 1.17613 1.22533 0.85102 1.03111 0.93384 1.86275 1.13631 1.78231 1.40360 1.18602 0.84762 0.93321 0.92049 1.20941 0.93725 1.10413 0.94775 1.96810 1.98649 1.83595 1.14694 1.20827 0.95591 0.94859 0.95414 1.19113 0.94415 1.03103 0.93910 1.24654 0.99548 0.96118 0.97502 1.86584 1.41382 1.58266 1.48125 0.95088 0.78410 0.85213 0.83851 1.20920 0.90704 0.94565 0.99090 1.21254 0.99848 1.06176 0.95081 1.23412 0.97792 1.01187 0.94653 0.91731 0.87830 0.91702 0.86783 0.89469 0.76174 0.88316 0.88387 0.83989 0.90252 0.77055 1.18169 1.17527 0.84623 0.84251 0.89310 0.88151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.26 10.57 -39.26 -0.41 -0.67 16 3 C 0.47 0.41 7.49 36.01 0.27 0.68 16 4 O -0.50 -1.94 15.65 -18.75 -0.29 -2.24 16 5 C -0.11 0.28 4.13 -90.96 -0.38 -0.10 16 6 H 0.13 -0.59 8.14 -51.93 -0.42 -1.02 16 7 C -0.12 0.32 7.15 -25.92 -0.19 0.14 16 8 C 0.12 -0.25 4.33 -67.09 -0.29 -0.54 16 9 H 0.12 -0.02 7.47 -51.93 -0.39 -0.41 16 10 N -0.71 2.25 5.26 -53.00 -0.28 1.97 16 11 C 0.52 0.03 7.91 -10.99 -0.09 -0.06 16 12 O -0.50 -2.62 16.10 -14.36 -0.23 -2.85 16 13 C 0.04 -0.08 5.22 36.00 0.19 0.11 16 14 O -0.27 -0.57 9.00 -39.37 -0.35 -0.92 16 15 C 0.16 0.24 6.68 -39.20 -0.26 -0.02 16 16 C -0.12 -0.29 6.24 -39.37 -0.25 -0.53 16 17 Br -0.02 -0.08 33.16 -68.01 -2.26 -2.33 16 18 C -0.05 -0.06 8.40 -39.58 -0.33 -0.39 16 19 C -0.10 -0.04 5.39 -104.60 -0.56 -0.60 16 20 C -0.07 0.07 2.79 36.01 0.10 0.17 16 21 O -0.54 -0.09 12.81 -35.23 -0.45 -0.54 16 22 Si 0.67 -0.75 29.85 -169.99 -5.07 -5.83 16 23 C -0.03 0.02 9.68 -39.60 -0.38 -0.37 16 24 C -0.20 0.19 9.04 -39.44 -0.36 -0.17 16 25 C -0.13 0.30 7.43 -25.90 -0.19 0.10 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 29 H 0.11 -0.14 7.44 -51.93 -0.39 -0.52 16 30 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 31 H 0.40 -2.62 8.70 -40.82 -0.36 -2.98 16 32 H 0.10 -0.50 7.66 -51.93 -0.40 -0.90 16 33 H 0.10 -0.46 7.66 -51.92 -0.40 -0.86 16 34 H 0.14 0.01 4.86 -52.49 -0.26 -0.25 16 35 H 0.08 -0.24 7.96 -51.92 -0.41 -0.65 16 36 H 0.38 -1.41 8.74 45.56 0.40 -1.01 16 37 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 38 H -0.25 -0.54 7.05 56.52 0.40 -0.14 16 39 H 0.14 -0.29 8.06 -52.49 -0.42 -0.72 16 40 H 0.14 -0.57 6.30 -52.49 -0.33 -0.90 16 41 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 42 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 LS Contribution 380.75 15.07 5.74 5.74 Total: 0.00 -11.69 380.75 -10.37 -22.06 By element: Atomic # 1 Polarization: -8.74 SS G_CDS: -5.11 Total: -13.84 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -1.65 Total: -0.55 kcal Atomic # 7 Polarization: 2.25 SS G_CDS: -0.28 Total: 1.97 kcal Atomic # 8 Polarization: -5.47 SS G_CDS: -1.75 Total: -7.22 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.07 Total: -5.83 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.33 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -11.69 -10.37 -22.06 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_6201210.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.788 kcal (2) G-P(sol) polarization free energy of solvation -11.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.477 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds