Wall clock time and date at job start Sat Mar 6 2021 16:05:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34233 * 117.00346 * 2 1 4 4 O 1.20828 * 119.99577 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00172 * 179.97438 * 3 2 1 6 6 H 1.09004 * 112.84479 * 48.80723 * 5 3 2 7 7 C 1.53778 * 113.61086 * 179.97438 * 5 3 2 8 8 C 1.53787 * 87.08035 * 140.06661 * 7 5 3 9 9 H 1.08994 * 113.61447 * 220.02014 * 8 7 5 10 10 N 1.46496 * 113.61210 * 89.11438 * 8 7 5 11 11 C 1.34774 * 120.00099 * 155.00440 * 10 8 7 12 12 O 1.21282 * 120.00036 * 359.97438 * 11 10 8 13 13 C 1.50698 * 120.00600 * 180.02562 * 11 10 8 14 14 O 1.42900 * 109.47675 * 179.97438 * 13 11 10 15 15 C 1.35912 * 117.00165 * 180.02562 * 14 13 11 16 16 C 1.38789 * 120.05811 * 179.72405 * 15 14 13 17 17 Br 1.89103 * 120.03489 * 0.02562 * 16 15 14 18 18 C 1.38245 * 119.92863 * 179.80848 * 16 15 14 19 19 C 1.38240 * 120.04016 * 0.44044 * 18 16 15 20 20 C 1.50704 * 119.93672 * 179.76380 * 19 18 16 21 21 O 1.42899 * 109.47355 * 245.02316 * 20 19 18 22 22 Si 1.86303 * 109.47034 * 5.02698 * 20 19 18 23 23 C 1.38284 * 120.12471 * 359.78987 * 19 18 16 24 24 C 1.38143 * 120.06617 * 0.02562 * 23 19 18 25 25 C 1.53778 * 113.69101 * 277.53681 * 5 3 2 26 26 H 1.08996 * 109.47063 * 59.99778 * 1 2 3 27 27 H 1.08998 * 109.46979 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46670 * 299.99840 * 1 2 3 29 29 H 1.08998 * 113.61879 * 25.52144 * 7 5 3 30 30 H 1.08999 * 113.61887 * 254.61251 * 7 5 3 31 31 H 0.97002 * 120.00490 * 335.00104 * 10 8 7 32 32 H 1.09005 * 109.46821 * 300.00153 * 13 11 10 33 33 H 1.09008 * 109.47008 * 59.99541 * 13 11 10 34 34 H 1.07995 * 119.97789 * 180.18374 * 18 16 15 35 35 H 1.09008 * 109.47066 * 125.02179 * 20 19 18 36 36 H 0.96700 * 113.99973 * 180.02562 * 21 20 19 37 37 H 1.48504 * 109.99723 * 178.67984 * 22 20 19 38 38 H 1.48500 * 109.99817 * 299.99311 * 22 20 19 39 39 H 1.07999 * 119.96597 * 179.97438 * 23 19 18 40 40 H 1.07997 * 120.01841 * 180.02562 * 24 23 19 41 41 H 1.08993 * 113.61229 * 105.46294 * 25 5 3 42 42 H 1.09000 * 113.61263 * 334.55944 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0239 0.6361 -0.7550 7 6 4.1078 2.7141 -0.0001 8 6 5.1821 2.2269 0.9865 9 1 5.3979 2.9384 1.7835 10 7 6.3908 1.7179 0.3337 11 6 7.5677 1.7310 0.9902 12 8 7.6263 2.1647 2.1213 13 6 8.8112 1.2080 0.3186 14 8 9.9211 1.3284 1.2106 15 6 11.1277 0.8990 0.7558 16 6 12.2497 0.9917 1.5675 17 35 12.1013 1.7150 3.3084 18 6 13.4749 0.5504 1.1036 19 6 13.5844 0.0259 -0.1707 20 6 14.9223 -0.4495 -0.6760 21 8 15.3368 0.3703 -1.7705 22 14 16.1791 -0.3377 0.6947 23 6 12.4687 -0.0629 -0.9829 24 6 11.2413 0.3730 -0.5228 25 6 4.1926 1.1230 1.3969 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 3.4178 3.4404 0.4294 30 1 4.5100 3.0290 -0.9630 31 1 6.3440 1.3713 -0.5711 32 1 8.6684 0.1600 0.0551 33 1 9.0069 1.7862 -0.5846 34 1 14.3479 0.6194 1.7356 35 1 14.8383 -1.4843 -1.0084 36 1 16.1919 0.1209 -2.1469 37 1 17.4954 -0.8336 0.2184 38 1 16.3030 1.0681 1.1567 39 1 12.5572 -0.4728 -1.9781 40 1 10.3704 0.3029 -1.1576 41 1 4.6631 0.1537 1.5613 42 1 3.5257 1.4140 2.2084 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_6201210.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:31 Heat of formation + Delta-G solvation = -116.653800 kcal Electronic energy + Delta-G solvation = -27956.999721 eV Core-core repulsion = 23531.195701 eV Total energy + Delta-G solvation = -4425.804019 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.045 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.08049 -41.58444 -40.77822 -39.47293 -38.75104 -37.46861 -37.35640 -34.50961 -33.50025 -32.21426 -30.56605 -29.88015 -29.08189 -26.89819 -26.83448 -26.21736 -24.10212 -22.69159 -22.27222 -21.84686 -20.45523 -19.52175 -19.00827 -18.56510 -18.30282 -17.86366 -17.45856 -17.43761 -17.14017 -16.97401 -16.68238 -16.04816 -15.79951 -15.61465 -15.31523 -15.06236 -14.78559 -14.48212 -14.32805 -14.17876 -14.03522 -13.92300 -13.70856 -13.64894 -13.45175 -13.14382 -12.86595 -12.51059 -12.30115 -12.11620 -11.90612 -11.87606 -11.82638 -11.76043 -11.74694 -11.39217 -11.19669 -11.02233 -10.48824 -10.21492 -9.97567 -9.28805 -4.95592 -0.00508 0.10249 0.64889 1.06573 1.27743 1.38089 1.44627 1.55334 1.73320 1.92532 2.39047 2.48393 3.22528 3.32345 3.33885 3.47688 3.66354 3.70662 3.76850 3.81574 3.86523 4.06836 4.08177 4.09769 4.12206 4.25983 4.28227 4.34626 4.42019 4.48898 4.63436 4.67627 4.68496 4.70952 4.81029 4.82193 4.89302 4.99286 5.05754 5.33396 5.34915 5.43613 5.49248 6.08094 6.44544 6.60736 6.65260 7.13986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.466 3.534 4 O -0.540 6.540 5 C -0.103 4.103 6 H 0.159 0.841 7 C -0.117 4.117 8 C 0.124 3.876 9 H 0.092 0.908 10 N -0.691 5.691 11 C 0.517 3.483 12 O -0.565 6.565 13 C 0.032 3.968 14 O -0.304 6.304 15 C 0.151 3.849 16 C -0.141 4.141 17 Br -0.050 7.050 18 C -0.059 4.059 19 C -0.114 4.114 20 C -0.064 4.064 21 O -0.555 6.555 22 Si 0.730 3.270 23 C -0.034 4.034 24 C -0.193 4.193 25 C -0.129 4.129 26 H 0.062 0.938 27 H 0.128 0.872 28 H 0.058 0.942 29 H 0.095 0.905 30 H 0.106 0.894 31 H 0.424 0.576 32 H 0.136 0.864 33 H 0.130 0.870 34 H 0.141 0.859 35 H 0.110 0.890 36 H 0.397 0.603 37 H -0.279 1.279 38 H -0.304 1.304 39 H 0.159 0.841 40 H 0.178 0.822 41 H 0.095 0.905 42 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.658 -8.004 -7.791 11.189 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.279 6.279 3 C 0.311 3.689 4 O -0.430 6.430 5 C -0.122 4.122 6 H 0.176 0.824 7 C -0.155 4.155 8 C 0.018 3.982 9 H 0.110 0.890 10 N -0.346 5.346 11 C 0.303 3.697 12 O -0.442 6.442 13 C -0.045 4.045 14 O -0.217 6.217 15 C 0.103 3.897 16 C -0.221 4.221 17 Br 0.035 6.965 18 C -0.078 4.078 19 C -0.115 4.115 20 C -0.175 4.175 21 O -0.365 6.365 22 Si 0.637 3.363 23 C -0.052 4.052 24 C -0.212 4.212 25 C -0.168 4.168 26 H 0.080 0.920 27 H 0.146 0.854 28 H 0.077 0.923 29 H 0.114 0.886 30 H 0.125 0.875 31 H 0.263 0.737 32 H 0.154 0.846 33 H 0.148 0.852 34 H 0.158 0.842 35 H 0.127 0.873 36 H 0.247 0.753 37 H -0.205 1.205 38 H -0.232 1.232 39 H 0.177 0.823 40 H 0.195 0.805 41 H 0.114 0.886 42 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -0.764 -6.432 -5.741 8.655 hybrid contribution 0.099 0.328 -1.498 1.537 sum -0.665 -6.103 -7.239 9.492 Atomic orbital electron populations 1.23514 0.75200 1.05575 1.02364 1.86520 1.24637 1.33269 1.83486 1.24210 0.92849 0.80941 0.70909 1.90680 1.68014 1.37524 1.46752 1.22811 0.85527 1.01517 1.02314 0.82382 1.23287 0.96084 0.94622 1.01534 1.21674 0.83633 0.96314 0.96567 0.89034 1.45272 1.05855 1.64155 1.19284 1.20502 0.85151 0.78027 0.85994 1.90805 1.86230 1.46708 1.20460 1.22863 0.82765 1.05716 0.93174 1.86237 1.14572 1.78584 1.42259 1.18761 0.84316 0.93773 0.92861 1.21089 0.94994 1.11909 0.94093 1.96761 1.98713 1.84121 1.16878 1.20888 0.95260 0.95478 0.96204 1.19331 0.95585 1.03000 0.93617 1.24637 0.98457 0.97443 0.96935 1.86536 1.42652 1.59056 1.48266 0.94435 0.77301 0.81806 0.82801 1.21250 0.90331 0.93852 0.99764 1.21629 1.01098 1.04358 0.94140 1.23370 0.97469 1.01284 0.94681 0.91970 0.85370 0.92305 0.88610 0.87520 0.73688 0.84642 0.85219 0.84180 0.87257 0.75253 1.20530 1.23205 0.82335 0.80481 0.88623 0.89274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.38 10.57 -51.44 -0.54 -0.92 16 3 C 0.47 0.82 7.49 71.24 0.53 1.35 16 4 O -0.54 -4.69 15.65 21.96 0.34 -4.34 16 5 C -0.10 0.62 4.13 -11.02 -0.05 0.58 16 6 H 0.16 -2.00 8.14 -2.38 -0.02 -2.02 16 7 C -0.12 0.66 7.15 31.12 0.22 0.88 16 8 C 0.12 -0.49 4.33 45.53 0.20 -0.30 16 9 H 0.09 0.16 7.47 -2.39 -0.02 0.14 16 10 N -0.69 5.36 5.26 -439.98 -2.31 3.04 16 11 C 0.52 -0.20 7.91 87.66 0.69 0.49 16 12 O -0.56 -6.85 16.10 16.00 0.26 -6.59 16 13 C 0.03 -0.21 5.22 71.24 0.37 0.16 16 14 O -0.30 -1.18 9.00 -73.52 -0.66 -1.84 16 15 C 0.15 0.34 6.68 22.52 0.15 0.50 16 16 C -0.14 -0.80 6.24 22.40 0.14 -0.66 16 17 Br -0.05 -0.45 33.16 -20.37 -0.68 -1.13 16 18 C -0.06 -0.18 8.40 22.27 0.19 0.01 16 19 C -0.11 0.04 5.39 -19.85 -0.11 -0.07 16 20 C -0.06 0.22 2.79 71.24 0.20 0.41 16 21 O -0.55 0.58 12.81 -148.98 -1.91 -1.32 16 22 Si 0.73 -1.17 29.85 68.60 2.05 0.88 16 23 C -0.03 0.13 9.68 22.26 0.22 0.34 16 24 C -0.19 0.90 9.04 22.36 0.20 1.10 16 25 C -0.13 0.59 7.43 31.13 0.23 0.82 16 26 H 0.06 -0.10 8.13 -2.39 -0.02 -0.12 16 27 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16 28 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 29 H 0.10 -0.12 7.44 -2.39 -0.02 -0.14 16 30 H 0.11 -1.00 8.14 -2.39 -0.02 -1.02 16 31 H 0.42 -6.86 8.70 -92.71 -0.81 -7.67 16 32 H 0.14 -1.91 7.66 -2.38 -0.02 -1.92 16 33 H 0.13 -1.69 7.66 -2.38 -0.02 -1.70 16 34 H 0.14 0.27 4.86 -2.91 -0.01 0.26 16 35 H 0.11 -0.97 7.96 -2.38 -0.02 -0.99 16 36 H 0.40 -3.44 8.74 -74.06 -0.65 -4.09 16 37 H -0.28 -0.51 7.11 99.48 0.71 0.19 16 38 H -0.30 -2.15 7.05 99.48 0.70 -1.45 16 39 H 0.16 -1.32 8.06 -2.91 -0.02 -1.35 16 40 H 0.18 -2.32 6.30 -2.91 -0.02 -2.34 16 41 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 42 H 0.09 -0.19 8.10 -2.39 -0.02 -0.21 16 Total: 0.00 -32.14 380.75 0.60 -31.53 By element: Atomic # 1 Polarization: -25.73 SS G_CDS: -0.33 Total: -26.06 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: 4.39 Total: 6.75 kcal Atomic # 7 Polarization: 5.36 SS G_CDS: -2.31 Total: 3.04 kcal Atomic # 8 Polarization: -12.50 SS G_CDS: -2.51 Total: -15.02 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: 2.05 Total: 0.88 kcal Atomic # 35 Polarization: -0.45 SS G_CDS: -0.68 Total: -1.13 kcal Total: -32.14 0.60 -31.53 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_6201210.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.120 kcal (2) G-P(sol) polarization free energy of solvation -32.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.533 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds