Wall clock time and date at job start Sat Mar 6 2021 16:05:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34224 * 117.00022 * 2 1 4 4 O 1.20828 * 120.00012 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00126 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.85303 * 48.79637 * 5 3 2 7 7 C 1.53786 * 113.61702 * 179.97438 * 5 3 2 8 8 C 1.53775 * 87.07988 * 140.05979 * 7 5 3 9 9 H 1.09006 * 113.61405 * 219.93236 * 8 7 5 10 10 N 1.46502 * 113.61442 * 89.11874 * 8 7 5 11 11 C 1.34771 * 120.00430 * 156.52343 * 10 8 7 12 12 O 1.21652 * 119.99911 * 0.02562 * 11 10 8 13 13 C 1.46992 * 120.00301 * 179.97438 * 11 10 8 14 14 C 1.35809 * 125.14148 * 179.97438 * 13 11 10 15 15 C 1.46258 * 106.09024 * 180.02562 * 14 13 11 16 16 C 1.39769 * 134.15315 * 180.02562 * 15 14 13 17 17 C 1.50702 * 120.09591 * 359.97438 * 16 15 14 18 18 O 1.42904 * 109.46785 * 74.99972 * 17 16 15 19 19 Si 1.86300 * 109.47500 * 195.00079 * 17 16 15 20 20 C 1.36630 * 119.81380 * 180.02562 * 16 15 14 21 21 C 1.38768 * 120.49577 * 359.77735 * 20 16 15 22 22 C 1.38260 * 120.67326 * 0.46145 * 21 20 16 23 23 O 1.35965 * 120.12167 * 179.80099 * 22 21 20 24 24 C 1.42901 * 116.99638 * 359.72551 * 23 22 21 25 25 C 1.39453 * 119.76216 * 359.52829 * 22 21 20 26 26 O 1.34766 * 133.24576 * 180.22572 * 25 22 21 27 27 C 1.53777 * 87.17882 * 334.52466 * 8 7 5 28 28 H 1.08998 * 109.47245 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47291 * 300.00157 * 1 2 3 30 30 H 1.08998 * 109.47290 * 60.00100 * 1 2 3 31 31 H 1.08997 * 113.60809 * 25.51249 * 7 5 3 32 32 H 1.08994 * 113.68963 * 254.62351 * 7 5 3 33 33 H 0.97006 * 119.99589 * 336.52826 * 10 8 7 34 34 H 1.08003 * 126.95518 * 0.02562 * 14 13 11 35 35 H 1.09004 * 109.46962 * 315.00523 * 17 16 15 36 36 H 0.96707 * 113.99754 * 180.02562 * 18 17 16 37 37 H 1.48493 * 109.99871 * 300.00247 * 19 17 16 38 38 H 1.48497 * 109.99848 * 61.32208 * 19 17 16 39 39 H 1.07999 * 119.75426 * 180.02562 * 20 16 15 40 40 H 1.07999 * 119.66234 * 180.24257 * 21 20 16 41 41 H 1.08996 * 109.47352 * 299.99786 * 24 23 22 42 42 H 1.08996 * 109.47452 * 60.00239 * 24 23 22 43 43 H 1.09005 * 109.47329 * 179.97438 * 24 23 22 44 44 H 1.08997 * 113.61631 * 140.01758 * 27 8 7 45 45 H 1.08998 * 113.61823 * 270.92713 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0234 0.6364 -0.7566 7 6 4.1078 2.7142 -0.0011 8 6 5.1827 2.2265 0.9845 9 1 5.4001 2.9385 1.7808 10 7 6.3909 1.7178 0.3307 11 6 7.5622 1.7023 0.9972 12 8 7.6160 2.1103 2.1420 13 6 8.7744 1.1913 0.3414 14 6 10.0048 1.1282 0.9127 15 6 10.8932 0.5584 -0.0998 16 6 12.2544 0.2429 -0.1344 17 6 13.1195 0.4951 1.0736 18 8 12.8504 -0.4961 2.0673 19 14 14.9141 0.4095 0.5812 20 6 12.7988 -0.2937 -1.2668 21 6 12.0094 -0.5326 -2.3827 22 6 10.6617 -0.2238 -2.3726 23 8 9.8995 -0.4589 -3.4737 24 6 10.5579 -1.0220 -4.6102 25 6 10.0858 0.3244 -1.2269 26 8 8.8333 0.7157 -0.9200 27 6 4.1947 1.1230 1.3978 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 3.4180 3.4402 0.4291 32 1 4.5093 3.0307 -0.9637 33 1 6.3479 1.3921 -0.5820 34 1 10.2730 1.4363 1.9125 35 1 12.9002 1.4835 1.4776 36 1 13.3727 -0.3953 2.8749 37 1 15.2257 -0.9332 0.0288 38 1 15.2142 1.4562 -0.4285 39 1 13.8506 -0.5375 -1.2923 40 1 12.4529 -0.9609 -3.2694 41 1 11.3505 -0.3507 -4.9405 42 1 10.9877 -1.9866 -4.3402 43 1 9.8374 -1.1587 -5.4167 44 1 4.6662 0.1543 1.5632 45 1 3.5287 1.4148 2.2098 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_6672420.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:41 Heat of formation + Delta-G solvation = -112.261206 kcal Electronic energy + Delta-G solvation = -31940.303884 eV Core-core repulsion = 27279.373872 eV Total energy + Delta-G solvation = -4660.930012 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.134 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -43.69729 -42.01047 -40.98320 -40.52314 -39.15422 -38.98368 -37.32511 -37.10725 -34.53504 -33.60452 -32.02220 -31.06651 -29.48373 -28.73920 -27.20116 -26.96579 -26.27101 -24.99670 -24.00657 -22.53857 -22.04927 -21.63413 -20.49040 -19.90848 -19.00766 -18.67422 -18.45469 -18.42526 -17.84644 -17.64321 -17.37106 -17.17109 -16.98375 -16.67530 -16.36877 -16.01319 -15.78747 -15.47533 -15.21715 -15.04308 -14.69595 -14.47837 -14.27541 -14.24509 -14.03017 -13.99893 -13.77988 -13.52412 -13.41647 -13.24037 -13.12641 -12.87254 -12.65072 -12.45743 -12.10883 -11.98727 -11.91330 -11.85164 -11.77941 -11.47685 -11.33203 -10.96600 -10.35402 -10.34002 -9.80503 -9.01902 -5.03474 -0.62158 0.08204 0.67433 1.15479 1.18842 1.25345 1.58309 1.70463 1.84405 1.89100 1.99739 2.01388 2.35120 3.12324 3.14587 3.20797 3.33570 3.51254 3.53906 3.65704 3.68287 3.79772 3.93970 3.96679 3.96975 4.05526 4.07072 4.12264 4.16487 4.24285 4.31327 4.37066 4.41963 4.43247 4.51708 4.57780 4.61165 4.65191 4.76182 4.79608 4.83985 4.85377 5.03245 5.19882 5.24598 5.32155 5.38922 5.59396 6.10893 6.26402 6.59856 6.73302 6.86488 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.471 3.529 4 O -0.504 6.504 5 C -0.115 4.115 6 H 0.126 0.874 7 C -0.123 4.123 8 C 0.121 3.879 9 H 0.119 0.881 10 N -0.702 5.702 11 C 0.608 3.392 12 O -0.505 6.505 13 C -0.025 4.025 14 C -0.099 4.099 15 C -0.082 4.082 16 C -0.051 4.051 17 C -0.071 4.071 18 O -0.542 6.542 19 Si 0.686 3.314 20 C -0.097 4.097 21 C -0.177 4.177 22 C 0.151 3.849 23 O -0.309 6.309 24 C 0.024 3.976 25 C 0.049 3.951 26 O -0.173 6.173 27 C -0.131 4.131 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.115 0.885 32 H 0.088 0.912 33 H 0.410 0.590 34 H 0.175 0.825 35 H 0.075 0.925 36 H 0.383 0.617 37 H -0.249 1.249 38 H -0.253 1.253 39 H 0.134 0.866 40 H 0.148 0.852 41 H 0.060 0.940 42 H 0.060 0.940 43 H 0.107 0.893 44 H 0.089 0.911 45 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.634 -1.702 -1.640 4.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.391 6.391 5 C -0.134 4.134 6 H 0.144 0.856 7 C -0.161 4.161 8 C 0.015 3.985 9 H 0.137 0.863 10 N -0.353 5.353 11 C 0.394 3.606 12 O -0.380 6.380 13 C -0.076 4.076 14 C -0.119 4.119 15 C -0.083 4.083 16 C -0.052 4.052 17 C -0.181 4.181 18 O -0.349 6.349 19 Si 0.587 3.413 20 C -0.114 4.114 21 C -0.195 4.195 22 C 0.105 3.895 23 O -0.222 6.222 24 C -0.071 4.071 25 C 0.000 4.000 26 O -0.075 6.075 27 C -0.170 4.170 28 H 0.121 0.879 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.134 0.866 32 H 0.106 0.894 33 H 0.246 0.754 34 H 0.193 0.807 35 H 0.093 0.907 36 H 0.231 0.769 37 H -0.174 1.174 38 H -0.178 1.178 39 H 0.151 0.849 40 H 0.166 0.834 41 H 0.079 0.921 42 H 0.079 0.921 43 H 0.125 0.875 44 H 0.108 0.892 45 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 3.124 -1.414 -2.156 4.050 hybrid contribution -0.590 -0.296 -0.866 1.088 sum 2.534 -1.710 -3.021 4.298 Atomic orbital electron populations 1.23325 0.75934 1.04015 1.02726 1.86522 1.23740 1.33335 1.83772 1.23527 0.91612 0.81438 0.72106 1.90688 1.66956 1.36410 1.45029 1.22721 0.87764 1.01021 1.01854 0.85619 1.23357 0.96764 0.94917 1.01078 1.21881 0.83180 0.96622 0.96775 0.86339 1.45577 1.07471 1.64375 1.17892 1.16559 0.80897 0.78059 0.85116 1.90927 1.84482 1.46648 1.15989 1.21903 0.96486 1.05320 0.83850 1.22716 0.89691 0.99432 1.00106 1.19391 0.93661 1.02568 0.92706 1.18440 0.91357 1.00654 0.94703 1.24660 1.08921 0.94281 0.90231 1.86524 1.68020 1.51668 1.28676 0.95121 0.78228 0.80822 0.87158 1.20420 0.99751 0.98674 0.92575 1.20930 0.91165 1.06507 1.00941 1.17694 0.89440 0.97453 0.84898 1.86170 1.36916 1.78148 1.21009 1.23197 0.99519 0.98008 0.86372 1.18722 0.82934 1.03917 0.94407 1.84042 1.28430 1.66285 1.28697 1.23451 0.97676 1.01157 0.94673 0.87857 0.91716 0.91736 0.86624 0.89374 0.75432 0.80711 0.90680 0.76937 1.17374 1.17757 0.84920 0.83444 0.92124 0.92098 0.87514 0.89228 0.87978 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.59 10.57 -39.24 -0.41 -1.00 16 3 C 0.47 0.87 7.49 36.00 0.27 1.14 16 4 O -0.50 -2.29 15.65 -18.75 -0.29 -2.59 16 5 C -0.11 0.12 4.15 -90.81 -0.38 -0.26 16 6 H 0.13 -0.33 8.14 -51.93 -0.42 -0.75 16 7 C -0.12 0.18 7.15 -25.92 -0.19 -0.01 16 8 C 0.12 -0.10 4.29 -67.12 -0.29 -0.39 16 9 H 0.12 0.00 7.50 -51.93 -0.39 -0.39 16 10 N -0.70 0.17 5.26 -54.23 -0.29 -0.11 16 11 C 0.61 1.53 7.80 -12.72 -0.10 1.43 16 12 O -0.50 -2.60 16.44 5.23 0.09 -2.51 16 13 C -0.03 -0.07 7.07 -36.91 -0.26 -0.33 16 14 C -0.10 -0.29 10.68 -37.23 -0.40 -0.69 16 15 C -0.08 -0.29 6.16 -105.21 -0.65 -0.94 16 16 C -0.05 -0.13 5.30 -104.63 -0.55 -0.69 16 17 C -0.07 0.00 2.70 36.01 0.10 0.09 16 18 O -0.54 -0.15 12.86 -35.23 -0.45 -0.60 16 19 Si 0.69 -1.06 30.20 -169.99 -5.13 -6.19 16 20 C -0.10 -0.18 8.62 -39.97 -0.34 -0.52 16 21 C -0.18 -0.20 9.03 -39.38 -0.36 -0.56 16 22 C 0.15 0.41 6.70 -39.12 -0.26 0.15 16 23 O -0.31 -0.62 10.50 -19.63 -0.21 -0.83 16 24 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 25 C 0.05 0.19 7.35 -38.24 -0.28 -0.09 16 26 O -0.17 -0.58 10.28 2.68 0.03 -0.55 16 27 C -0.13 0.15 7.45 -25.77 -0.19 -0.04 16 28 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 30 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 31 H 0.12 -0.07 7.44 -51.93 -0.39 -0.45 16 32 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.41 -0.75 8.42 -40.82 -0.34 -1.10 16 34 H 0.18 0.28 8.06 -52.48 -0.42 -0.14 16 35 H 0.08 -0.10 7.96 -51.93 -0.41 -0.52 16 36 H 0.38 -1.85 8.74 45.56 0.40 -1.45 16 37 H -0.25 -0.24 6.75 56.52 0.38 0.14 16 38 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 39 H 0.13 0.09 4.85 -52.49 -0.25 -0.16 16 40 H 0.15 -0.25 6.26 -52.49 -0.33 -0.58 16 41 H 0.06 -0.19 7.67 -51.93 -0.40 -0.59 16 42 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 43 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 44 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.10 -0.13 8.10 -51.93 -0.42 -0.55 16 LS Contribution 387.53 15.07 5.84 5.84 Total: 0.00 -10.54 387.53 -8.19 -18.73 By element: Atomic # 1 Polarization: -4.93 SS G_CDS: -5.53 Total: -10.46 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -1.82 Total: 0.28 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.29 Total: -0.11 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -1.25 Total: -8.08 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.13 Total: -6.19 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -10.54 -8.19 -18.73 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_6672420.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.535 kcal (2) G-P(sol) polarization free energy of solvation -10.541 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.076 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.726 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds