Wall clock time and date at job start Sat Mar 6 2021 16:05:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34231 * 116.99859 * 2 1 4 4 O 1.20825 * 119.99808 * 359.97438 * 3 2 1 5 5 C 1.50698 * 119.99917 * 180.02562 * 3 2 1 6 6 H 1.08997 * 112.85417 * 48.80142 * 5 3 2 7 7 C 1.53781 * 113.61342 * 179.97438 * 5 3 2 8 8 C 1.53786 * 87.17350 * 140.02323 * 7 5 3 9 9 H 1.09000 * 113.61138 * 220.06261 * 8 7 5 10 10 N 1.46496 * 113.61518 * 89.15486 * 8 7 5 11 11 C 1.34779 * 119.99390 * 154.99856 * 10 8 7 12 12 O 1.21631 * 120.00390 * 0.02562 * 11 10 8 13 13 C 1.47197 * 119.99353 * 180.02562 * 11 10 8 14 14 C 1.36009 * 123.46308 * 359.70789 * 13 11 10 15 15 S 1.70451 * 110.81595 * 179.89109 * 14 13 11 16 16 C 1.75507 * 92.44396 * 0.31710 * 15 14 13 17 17 C 1.50701 * 124.71096 * 179.85376 * 16 15 14 18 18 O 1.42904 * 109.47211 * 244.96271 * 17 16 15 19 19 Si 1.86299 * 109.47123 * 4.95822 * 17 16 15 20 20 C 1.32769 * 110.57444 * 359.81977 * 16 15 14 21 21 C 1.53782 * 113.68885 * 277.53363 * 5 3 2 22 22 H 1.08993 * 109.47104 * 60.00411 * 1 2 3 23 23 H 1.09003 * 109.47013 * 180.02562 * 1 2 3 24 24 H 1.08996 * 109.47162 * 300.00144 * 1 2 3 25 25 H 1.09002 * 113.61445 * 254.61323 * 7 5 3 26 26 H 1.09002 * 113.61408 * 25.43053 * 7 5 3 27 27 H 0.97001 * 120.00117 * 335.00621 * 10 8 7 28 28 H 1.07998 * 124.58792 * 359.97438 * 14 13 11 29 29 H 1.08998 * 109.47074 * 124.96176 * 17 16 15 30 30 H 0.96690 * 114.00149 * 180.02562 * 18 17 16 31 31 H 1.48498 * 110.00253 * 300.00228 * 19 17 16 32 32 H 1.48502 * 109.99688 * 61.31846 * 19 17 16 33 33 H 1.07999 * 123.45323 * 179.97438 * 20 16 15 34 34 H 1.08997 * 113.61668 * 334.55405 * 21 5 3 35 35 H 1.08998 * 113.61674 * 105.37914 * 21 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0234 0.6366 -0.7566 7 6 4.1077 2.7143 -0.0011 8 6 5.1830 2.2292 0.9854 9 1 5.3978 2.9414 1.7821 10 7 6.3924 1.7220 0.3326 11 6 7.5695 1.7376 0.9890 12 8 7.6275 2.1722 2.1235 13 6 8.7848 1.2285 0.3328 14 6 8.7995 0.7221 -0.9295 15 16 10.3720 0.2309 -1.3668 16 6 11.0340 0.7067 0.1874 17 6 12.4811 0.5648 0.5836 18 8 12.5912 -0.3704 1.6585 19 14 13.4669 -0.0462 -0.8743 20 6 10.0829 1.2097 0.9654 21 6 4.1935 1.1226 1.3952 22 1 -0.3633 0.5137 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8899 25 1 4.5091 3.0294 -0.9643 26 1 3.4173 3.4406 0.4278 27 1 6.3461 1.3751 -0.5721 28 1 7.9324 0.6434 -1.5686 29 1 12.8669 1.5328 0.9031 30 1 13.4970 -0.5113 1.9660 31 1 12.9507 -1.3655 -1.3196 32 1 13.3865 0.9328 -1.9880 33 1 10.2617 1.5677 1.9685 34 1 3.5273 1.4134 2.2074 35 1 4.6630 0.1527 1.5595 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_6894386.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:46 Heat of formation + Delta-G solvation = -85.154353 kcal Electronic energy + Delta-G solvation = -21100.945757 eV Core-core repulsion = 17579.697716 eV Total energy + Delta-G solvation = -3521.248041 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.075 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.04265 -40.99197 -39.48017 -38.51215 -37.35747 -37.13072 -34.48527 -31.89319 -29.45694 -27.30067 -26.97717 -26.95676 -25.46296 -22.59541 -22.06170 -20.57271 -20.51815 -18.95070 -18.65804 -18.43026 -18.15598 -17.73281 -17.36988 -16.89737 -16.27980 -16.08064 -15.75597 -15.45501 -15.07009 -14.73608 -14.35314 -14.28978 -13.98965 -13.92255 -13.76788 -13.63690 -13.45413 -13.18549 -12.87435 -12.68504 -12.33671 -12.09238 -11.94603 -11.84783 -11.79947 -11.34108 -10.97445 -10.51484 -10.23296 -10.01747 -9.55773 -5.32977 -0.41821 0.32324 0.67492 0.86012 1.10430 1.13630 1.49229 1.68422 1.79718 1.95445 2.28995 3.12405 3.21476 3.23882 3.55360 3.60223 3.65939 3.78326 3.91814 3.93464 4.14449 4.21436 4.22330 4.30671 4.37403 4.52141 4.57579 4.62269 4.65960 4.69541 4.76324 4.87621 5.00644 5.17624 5.36746 5.41143 6.34613 6.49646 6.71130 7.13309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.124 0.876 7 C -0.124 4.124 8 C 0.123 3.877 9 H 0.117 0.883 10 N -0.711 5.711 11 C 0.584 3.416 12 O -0.526 6.526 13 C -0.155 4.155 14 C -0.203 4.203 15 S 0.178 5.822 16 C -0.197 4.197 17 C -0.035 4.035 18 O -0.542 6.542 19 Si 0.671 3.329 20 C -0.049 4.049 21 C -0.132 4.132 22 H 0.064 0.936 23 H 0.103 0.897 24 H 0.064 0.936 25 H 0.086 0.914 26 H 0.114 0.886 27 H 0.400 0.600 28 H 0.172 0.828 29 H 0.085 0.915 30 H 0.385 0.615 31 H -0.234 1.234 32 H -0.239 1.239 33 H 0.159 0.841 34 H 0.100 0.900 35 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.745 -2.266 -3.190 5.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.142 0.858 7 C -0.162 4.162 8 C 0.018 3.982 9 H 0.135 0.865 10 N -0.363 5.363 11 C 0.370 3.630 12 O -0.402 6.402 13 C -0.173 4.173 14 C -0.341 4.341 15 S 0.444 5.556 16 C -0.313 4.313 17 C -0.148 4.148 18 O -0.349 6.349 19 Si 0.569 3.431 20 C -0.078 4.078 21 C -0.171 4.171 22 H 0.083 0.917 23 H 0.121 0.879 24 H 0.083 0.917 25 H 0.104 0.896 26 H 0.132 0.868 27 H 0.235 0.765 28 H 0.190 0.810 29 H 0.103 0.897 30 H 0.233 0.767 31 H -0.157 1.157 32 H -0.162 1.162 33 H 0.176 0.824 34 H 0.118 0.882 35 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 3.502 -2.562 -4.611 6.331 hybrid contribution -1.520 0.632 0.910 1.881 sum 1.981 -1.930 -3.701 4.620 Atomic orbital electron populations 1.23325 0.75926 1.04016 1.02734 1.86521 1.23751 1.33342 1.83791 1.23547 0.91639 0.81440 0.72122 1.90689 1.66953 1.36424 1.44996 1.22648 0.87692 1.01030 1.01869 0.85828 1.23370 0.96986 0.94818 1.01052 1.21841 0.83302 0.96421 0.96651 0.86516 1.45506 1.07304 1.64976 1.18488 1.17563 0.82243 0.77790 0.85394 1.90831 1.85777 1.45843 1.17749 1.20190 0.94942 1.07658 0.94543 1.25808 1.03820 1.04494 0.99934 1.83215 0.98353 1.59398 1.14625 1.23426 0.98983 1.10183 0.98751 1.23996 0.94308 0.96718 0.99761 1.86522 1.33398 1.62957 1.52047 0.94677 0.89094 0.82225 0.77056 1.21039 0.88918 0.97292 1.00510 1.23443 0.97807 1.01246 0.94571 0.91738 0.87852 0.91711 0.89585 0.86791 0.76492 0.81033 0.89696 0.76664 1.15704 1.16234 0.82357 0.88181 0.89349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.53 10.57 -39.26 -0.41 -0.94 16 3 C 0.47 0.81 7.49 36.00 0.27 1.08 16 4 O -0.50 -2.29 15.65 -18.75 -0.29 -2.58 16 5 C -0.11 0.14 4.14 -90.96 -0.38 -0.23 16 6 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 7 C -0.12 0.18 7.15 -25.92 -0.19 -0.01 16 8 C 0.12 -0.07 4.33 -67.00 -0.29 -0.36 16 9 H 0.12 0.11 7.47 -51.93 -0.39 -0.28 16 10 N -0.71 0.50 5.23 -54.05 -0.28 0.21 16 11 C 0.58 1.56 7.79 -12.62 -0.10 1.46 16 12 O -0.53 -3.40 16.40 5.25 0.09 -3.31 16 13 C -0.15 -0.28 5.98 -104.63 -0.63 -0.90 16 14 C -0.20 0.10 10.38 29.93 0.31 0.41 16 15 S 0.18 0.08 20.20 -107.50 -2.17 -2.09 16 16 C -0.20 -0.31 5.69 -36.18 -0.21 -0.52 16 17 C -0.03 0.02 2.93 36.01 0.11 0.13 16 18 O -0.54 0.13 12.86 -35.23 -0.45 -0.32 16 19 Si 0.67 -1.32 30.92 -169.99 -5.26 -6.58 16 20 C -0.05 -0.13 9.95 -39.02 -0.39 -0.52 16 21 C -0.13 0.13 7.44 -25.80 -0.19 -0.06 16 22 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 23 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 24 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 25 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 26 H 0.11 -0.04 7.44 -51.93 -0.39 -0.42 16 27 H 0.40 -1.39 7.20 -40.82 -0.29 -1.69 16 28 H 0.17 -0.67 7.01 -52.49 -0.37 -1.04 16 29 H 0.09 -0.20 7.96 -51.93 -0.41 -0.61 16 30 H 0.39 -2.09 8.74 45.56 0.40 -1.69 16 31 H -0.23 -0.18 7.11 56.52 0.40 0.22 16 32 H -0.24 -0.01 7.11 56.52 0.40 0.39 16 33 H 0.16 0.47 8.06 -52.49 -0.42 0.04 16 34 H 0.10 -0.08 8.10 -51.93 -0.42 -0.50 16 35 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 320.66 15.07 4.83 4.83 Total: 0.00 -9.82 320.66 -8.59 -18.41 By element: Atomic # 1 Polarization: -5.13 SS G_CDS: -4.03 Total: -9.15 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -0.61 Total: 1.53 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.28 Total: 0.21 kcal Atomic # 8 Polarization: -6.08 SS G_CDS: -1.08 Total: -7.16 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.26 Total: -6.58 kcal Atomic # 16 Polarization: 0.08 SS G_CDS: -2.17 Total: -2.09 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -9.82 -8.59 -18.41 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_6894386.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.743 kcal (2) G-P(sol) polarization free energy of solvation -9.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.565 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds