Wall clock time and date at job start Sat Mar 6 2021 16:05:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34228 * 117.00238 * 2 1 4 4 O 1.20832 * 119.99775 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00202 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.84709 * 48.80879 * 5 3 2 7 7 C 1.53781 * 113.61440 * 180.02562 * 5 3 2 8 8 C 1.53783 * 87.08093 * 140.06860 * 7 5 3 9 9 H 1.09001 * 113.61470 * 219.93717 * 8 7 5 10 10 N 1.46493 * 113.61377 * 89.11529 * 8 7 5 11 11 C 1.34780 * 120.00103 * 154.99780 * 10 8 7 12 12 O 1.21559 * 119.99516 * 0.02562 * 11 10 8 13 13 C 1.47839 * 120.00344 * 180.02562 * 11 10 8 14 14 C 1.39560 * 120.14483 * 353.75287 * 13 11 10 15 15 C 1.37972 * 119.85344 * 180.02562 * 14 13 11 16 16 C 1.50701 * 119.92945 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.46998 * 255.02131 * 16 15 14 18 18 Si 1.86299 * 109.46937 * 15.01682 * 16 15 14 19 19 C 1.38339 * 120.14492 * 359.97438 * 15 14 13 20 20 C 1.50701 * 119.85408 * 179.97438 * 19 15 14 21 21 C 1.38379 * 120.29645 * 0.25490 * 19 15 14 22 22 C 1.37937 * 120.13915 * 359.49010 * 21 19 15 23 23 C 1.50704 * 120.07229 * 180.27119 * 22 21 19 24 24 C 1.53777 * 113.69455 * 277.53969 * 5 3 2 25 25 H 1.09000 * 109.46858 * 299.99512 * 1 2 3 26 26 H 1.08993 * 109.47023 * 59.99970 * 1 2 3 27 27 H 1.08994 * 109.46594 * 179.97438 * 1 2 3 28 28 H 1.09003 * 113.61621 * 25.51928 * 7 5 3 29 29 H 1.09004 * 113.61599 * 254.61475 * 7 5 3 30 30 H 0.96997 * 120.00199 * 334.99982 * 10 8 7 31 31 H 1.07997 * 120.07043 * 359.97438 * 14 13 11 32 32 H 1.09000 * 109.47470 * 135.01544 * 16 15 14 33 33 H 0.96700 * 113.99959 * 299.99118 * 17 16 15 34 34 H 1.48496 * 110.00369 * 298.68332 * 18 16 15 35 35 H 1.48502 * 110.00090 * 60.00105 * 18 16 15 36 36 H 1.08998 * 109.47838 * 89.99521 * 20 19 15 37 37 H 1.08998 * 109.47207 * 210.00067 * 20 19 15 38 38 H 1.09009 * 109.46862 * 329.99640 * 20 19 15 39 39 H 1.07999 * 119.93178 * 179.72000 * 21 19 15 40 40 H 1.09003 * 109.47306 * 263.64592 * 23 22 21 41 41 H 1.08996 * 109.47341 * 23.64783 * 23 22 21 42 42 H 1.09001 * 109.47070 * 143.64855 * 23 22 21 43 43 H 1.08995 * 113.61817 * 105.45762 * 24 5 3 44 44 H 1.09003 * 113.61509 * 334.55595 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0239 0.6362 -0.7550 7 6 4.1078 2.7142 0.0011 8 6 5.1822 2.2260 0.9872 9 1 5.3991 2.9374 1.7840 10 7 6.3908 1.7175 0.3339 11 6 7.5678 1.7302 0.9904 12 8 7.6264 2.1632 2.1247 13 6 8.7877 1.2177 0.3309 14 6 8.7027 0.6015 -0.9184 15 6 9.8449 0.1248 -1.5282 16 6 9.7551 -0.5414 -2.8770 17 8 9.9004 -1.9544 -2.7209 18 14 8.0991 -0.1685 -3.6447 19 6 11.0725 0.2571 -0.9042 20 6 12.3158 -0.2664 -1.5759 21 6 11.1631 0.8628 0.3367 22 6 10.0296 1.3484 0.9548 23 6 10.1309 2.0133 2.3035 24 6 4.1926 1.1229 1.3968 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3632 -1.0276 -0.0005 28 1 3.4178 3.4401 0.4313 29 1 4.5099 3.0298 -0.9616 30 1 6.3440 1.3718 -0.5711 31 1 7.7449 0.4972 -1.4064 32 1 10.5481 -0.1637 -3.5224 33 1 10.7415 -2.2221 -2.3260 34 1 7.0103 -0.7065 -2.7901 35 1 7.9356 1.2979 -3.8123 36 1 12.7507 0.5169 -2.1967 37 1 13.0371 -0.5718 -0.8180 38 1 12.0587 -1.1231 -2.1990 39 1 12.1238 0.9590 0.8205 40 1 9.9045 1.2873 3.0844 41 1 11.1417 2.3958 2.4450 42 1 9.4197 2.8376 2.3565 43 1 4.6631 0.1536 1.5613 44 1 3.5258 1.4140 2.2085 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_9599494.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:53 Heat of formation + Delta-G solvation = -98.584947 kcal Electronic energy + Delta-G solvation = -27168.557328 eV Core-core repulsion = 23246.499408 eV Total energy + Delta-G solvation = -3922.057919 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.150 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.15859 -41.56057 -40.42471 -39.16337 -37.66598 -37.32371 -34.91364 -34.36744 -33.20470 -29.77953 -29.18501 -28.68005 -26.99362 -26.93567 -25.57515 -23.92233 -23.16954 -22.24650 -21.16777 -20.43074 -19.20143 -18.66411 -18.34327 -17.81595 -17.38530 -17.26163 -16.71449 -16.51201 -16.31918 -16.19209 -15.59915 -15.39633 -15.05369 -14.94315 -14.67378 -14.62786 -14.31547 -14.05098 -13.90339 -13.72470 -13.54252 -13.48986 -13.22229 -12.98523 -12.87592 -12.84504 -12.76832 -12.66679 -12.23479 -11.95254 -11.86157 -11.79503 -11.36674 -11.34159 -11.22607 -10.68708 -10.26009 -10.00542 -9.68906 -4.94835 -0.34076 0.08521 1.13229 1.22689 1.51436 1.67660 1.70212 1.79914 1.89712 2.57149 3.10767 3.19786 3.35678 3.41480 3.45418 3.56209 3.64579 3.67576 3.70229 3.92736 3.99519 4.03843 4.15074 4.22886 4.23595 4.35403 4.35834 4.40850 4.42073 4.50261 4.56616 4.60033 4.61049 4.65559 4.74368 4.77450 4.83411 4.85722 4.90211 4.99109 5.18597 5.30671 5.36703 5.39602 5.49445 5.71055 6.28910 6.40822 6.71155 7.07278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.471 3.529 4 O -0.503 6.503 5 C -0.115 4.115 6 H 0.123 0.877 7 C -0.125 4.125 8 C 0.122 3.878 9 H 0.118 0.882 10 N -0.714 5.714 11 C 0.565 3.435 12 O -0.520 6.520 13 C -0.143 4.143 14 C -0.077 4.077 15 C -0.129 4.129 16 C -0.083 4.083 17 O -0.533 6.533 18 Si 0.741 3.259 19 C -0.040 4.040 20 C -0.126 4.126 21 C -0.127 4.127 22 C -0.009 4.009 23 C -0.124 4.124 24 C -0.131 4.131 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.115 0.885 29 H 0.085 0.915 30 H 0.398 0.602 31 H 0.122 0.878 32 H 0.077 0.923 33 H 0.363 0.637 34 H -0.251 1.251 35 H -0.246 1.246 36 H 0.081 0.919 37 H 0.077 0.923 38 H 0.069 0.931 39 H 0.135 0.865 40 H 0.079 0.921 41 H 0.061 0.939 42 H 0.097 0.903 43 H 0.088 0.912 44 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.699 -2.367 -4.008 5.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.390 6.390 5 C -0.134 4.134 6 H 0.141 0.859 7 C -0.163 4.163 8 C 0.017 3.983 9 H 0.136 0.864 10 N -0.366 5.366 11 C 0.353 3.647 12 O -0.397 6.397 13 C -0.146 4.146 14 C -0.095 4.095 15 C -0.129 4.129 16 C -0.191 4.191 17 O -0.340 6.340 18 Si 0.639 3.361 19 C -0.040 4.040 20 C -0.182 4.182 21 C -0.145 4.145 22 C -0.010 4.010 23 C -0.180 4.180 24 C -0.170 4.170 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.134 0.866 29 H 0.104 0.896 30 H 0.233 0.767 31 H 0.140 0.860 32 H 0.095 0.905 33 H 0.212 0.788 34 H -0.176 1.176 35 H -0.170 1.170 36 H 0.100 0.900 37 H 0.096 0.904 38 H 0.088 0.912 39 H 0.153 0.847 40 H 0.098 0.902 41 H 0.080 0.920 42 H 0.115 0.885 43 H 0.106 0.894 44 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 1.149 -1.349 -3.341 3.782 hybrid contribution 0.850 -0.089 0.634 1.064 sum 1.999 -1.438 -2.708 3.660 Atomic orbital electron populations 1.23329 0.75892 1.04037 1.02736 1.86523 1.23774 1.33290 1.83765 1.23507 0.91561 0.81466 0.72130 1.90689 1.66928 1.36402 1.45010 1.22658 0.87850 1.01021 1.01877 0.85918 1.23383 0.97001 0.94856 1.01054 1.21808 0.83348 0.96471 0.96673 0.86411 1.45644 1.07587 1.64895 1.18465 1.18215 0.82820 0.77942 0.85676 1.90760 1.85258 1.46024 1.17673 1.19619 0.93699 1.05329 0.95993 1.21052 0.97696 0.96787 0.94012 1.20035 0.92970 1.02154 0.97762 1.25298 1.14924 0.83614 0.95300 1.86810 1.42594 1.19397 1.85218 0.92908 0.73225 0.80534 0.89383 1.20010 0.94542 0.95387 0.94105 1.20989 0.94741 1.01412 1.01067 1.21031 0.98588 0.99839 0.95015 1.20108 0.91117 0.93529 0.96242 1.21133 1.02800 1.01913 0.92149 1.23395 0.97785 1.01237 0.94593 0.91714 0.91716 0.87828 0.86649 0.89629 0.76672 0.86040 0.90481 0.78807 1.17580 1.17039 0.90011 0.90417 0.91215 0.84678 0.90235 0.91979 0.88503 0.89377 0.88059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.64 10.57 -39.25 -0.41 -1.05 16 3 C 0.47 0.98 7.49 36.00 0.27 1.25 16 4 O -0.50 -2.38 15.65 -18.76 -0.29 -2.68 16 5 C -0.11 0.06 4.13 -90.96 -0.38 -0.31 16 6 H 0.12 -0.26 8.14 -51.93 -0.42 -0.68 16 7 C -0.12 0.11 7.15 -25.92 -0.19 -0.07 16 8 C 0.12 -0.02 4.32 -67.14 -0.29 -0.31 16 9 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 10 N -0.71 -0.22 5.21 -53.98 -0.28 -0.50 16 11 C 0.56 1.57 7.70 -12.33 -0.09 1.47 16 12 O -0.52 -2.69 12.95 5.31 0.07 -2.62 16 13 C -0.14 -0.33 5.87 -104.97 -0.62 -0.94 16 14 C -0.08 -0.10 8.13 -39.19 -0.32 -0.42 16 15 C -0.13 -0.08 5.26 -104.68 -0.55 -0.63 16 16 C -0.08 0.07 1.96 36.01 0.07 0.14 16 17 O -0.53 0.05 12.64 -35.23 -0.45 -0.40 16 18 Si 0.74 -1.09 30.40 -169.99 -5.17 -6.26 16 19 C -0.04 0.00 5.87 -104.53 -0.61 -0.61 16 20 C -0.13 0.35 9.27 36.01 0.33 0.68 16 21 C -0.13 -0.05 9.31 -39.64 -0.37 -0.42 16 22 C -0.01 -0.02 5.91 -104.22 -0.62 -0.63 16 23 C -0.12 -0.21 8.73 36.01 0.31 0.11 16 24 C -0.13 0.08 7.43 -25.94 -0.19 -0.12 16 25 H 0.06 -0.01 8.13 -51.93 -0.42 -0.44 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.12 -0.01 7.44 -51.93 -0.39 -0.40 16 29 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.40 -0.54 6.77 -40.82 -0.28 -0.82 16 31 H 0.12 0.00 3.32 -52.49 -0.17 -0.17 16 32 H 0.08 -0.19 7.38 -51.93 -0.38 -0.57 16 33 H 0.36 -0.94 6.84 45.56 0.31 -0.62 16 34 H -0.25 -0.07 6.80 56.52 0.38 0.31 16 35 H -0.25 0.06 7.11 56.52 0.40 0.47 16 36 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 37 H 0.08 -0.27 8.08 -51.93 -0.42 -0.69 16 38 H 0.07 -0.27 4.96 -51.92 -0.26 -0.52 16 39 H 0.14 -0.20 8.06 -52.49 -0.42 -0.63 16 40 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 41 H 0.06 0.00 8.04 -51.93 -0.42 -0.42 16 42 H 0.10 0.32 5.86 -51.93 -0.30 0.01 16 43 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 44 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 LS Contribution 357.86 15.07 5.39 5.39 Total: 0.00 -7.49 357.86 -9.44 -16.94 By element: Atomic # 1 Polarization: -2.93 SS G_CDS: -6.13 Total: -9.06 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -2.17 Total: 0.23 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -0.28 Total: -0.50 kcal Atomic # 8 Polarization: -5.66 SS G_CDS: -1.08 Total: -6.75 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.17 Total: -6.26 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -7.49 -9.44 -16.94 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_9599494.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.648 kcal (2) G-P(sol) polarization free energy of solvation -7.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.937 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds