Wall clock time and date at job start Sat Mar 6 2021 16:05:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34228 * 116.99519 * 2 1 4 4 O 1.20824 * 120.00465 * 359.97438 * 3 2 1 5 5 C 1.50707 * 120.00121 * 180.02562 * 3 2 1 6 6 H 1.09003 * 112.84873 * 48.79971 * 5 3 2 7 7 C 1.53779 * 113.61537 * 180.02562 * 5 3 2 8 8 C 1.53782 * 87.08038 * 140.06402 * 7 5 3 9 9 H 1.09002 * 113.61052 * 219.93461 * 8 7 5 10 10 N 1.46498 * 113.61542 * 89.11161 * 8 7 5 11 11 C 1.34777 * 119.99828 * 154.72141 * 10 8 7 12 12 O 1.21283 * 120.00222 * 0.28168 * 11 10 8 13 13 C 1.50703 * 120.00290 * 180.27728 * 11 10 8 14 14 N 1.46492 * 109.47441 * 180.02562 * 13 11 10 15 15 C 1.36833 * 125.06064 * 265.02531 * 14 13 11 16 16 C 1.34243 * 109.93554 * 179.97438 * 15 14 13 17 17 C 1.50702 * 126.49799 * 180.02562 * 16 15 14 18 18 O 1.42899 * 109.47377 * 104.97358 * 17 16 15 19 19 Si 1.86300 * 109.47160 * 344.97034 * 17 16 15 20 20 C 1.46489 * 107.00198 * 0.02562 * 16 15 14 21 21 C 1.39588 * 134.04086 * 180.02562 * 20 16 15 22 22 C 1.36658 * 119.76390 * 179.97438 * 21 20 16 23 23 C 1.38793 * 120.53316 * 359.97438 * 22 21 20 24 24 C 1.37786 * 120.66009 * 0.02562 * 23 22 21 25 25 C 1.37690 * 125.06175 * 84.71985 * 14 13 11 26 26 C 1.53778 * 87.08166 * 334.56503 * 8 7 5 27 27 H 1.08995 * 109.47708 * 300.00017 * 1 2 3 28 28 H 1.08999 * 109.47431 * 60.00564 * 1 2 3 29 29 H 1.09008 * 109.47089 * 180.02562 * 1 2 3 30 30 H 1.08999 * 113.61533 * 25.51109 * 7 5 3 31 31 H 1.08997 * 113.61163 * 254.61221 * 7 5 3 32 32 H 0.97001 * 120.00384 * 335.00588 * 10 8 7 33 33 H 1.08998 * 109.46954 * 300.00581 * 13 11 10 34 34 H 1.09002 * 109.46946 * 59.99717 * 13 11 10 35 35 H 1.07995 * 125.03767 * 359.96318 * 15 14 13 36 36 H 1.09002 * 109.46546 * 224.97760 * 17 16 15 37 37 H 0.96696 * 113.99951 * 179.97438 * 18 17 16 38 38 H 1.48499 * 109.99705 * 60.00474 * 19 17 16 39 39 H 1.48499 * 110.00003 * 181.32031 * 19 17 16 40 40 H 1.08002 * 120.11794 * 359.97438 * 21 20 16 41 41 H 1.08003 * 119.73485 * 179.97438 * 22 21 20 42 42 H 1.07995 * 119.66823 * 179.97438 * 23 22 21 43 43 H 1.08006 * 120.10995 * 179.97438 * 24 23 22 44 44 H 1.08998 * 113.61637 * 139.97959 * 26 8 7 45 45 H 1.08999 * 113.61924 * 270.88614 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0612 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2751 -0.0006 6 1 4.0233 0.6367 -0.7567 7 6 4.1075 2.7144 0.0001 8 6 5.1826 2.2260 0.9852 9 1 5.4000 2.9372 1.7821 10 7 6.3908 1.7178 0.3309 11 6 7.5693 1.7355 0.9845 12 8 7.6287 2.1674 2.1163 13 6 8.8134 1.2185 0.3091 14 7 9.9527 1.3449 1.2213 15 6 10.8294 2.3953 1.2432 16 6 11.7539 2.2001 2.1967 17 6 12.8940 3.1232 2.5422 18 8 12.5994 3.8086 3.7610 19 14 13.1254 4.3642 1.1721 20 6 11.4445 0.9198 2.8377 21 6 12.0267 0.1874 3.8736 22 6 11.4822 -1.0088 4.2481 23 6 10.3542 -1.5016 3.6070 24 6 9.7636 -0.7951 2.5821 25 6 10.2973 0.4273 2.1883 26 6 4.1935 1.1222 1.3952 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5137 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 3.4178 3.4401 0.4310 31 1 4.5088 3.0304 -0.9628 32 1 6.3434 1.3724 -0.5743 33 1 8.6745 0.1702 0.0449 34 1 9.0044 1.7985 -0.5938 35 1 10.7844 3.2541 0.5899 36 1 13.8079 2.5418 2.6640 37 1 13.2917 4.4210 4.0451 38 1 11.8861 5.1632 0.9961 39 1 14.2671 5.2603 1.4860 40 1 12.9043 0.5648 4.3774 41 1 11.9333 -1.5752 5.0495 42 1 9.9358 -2.4487 3.9140 43 1 8.8862 -1.1872 2.0890 44 1 4.6642 0.1527 1.5585 45 1 3.5272 1.4125 2.2075 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_9818708.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:56 Heat of formation + Delta-G solvation = -44.682906 kcal Electronic energy + Delta-G solvation = -29582.693201 eV Core-core repulsion = 25341.094458 eV Total energy + Delta-G solvation = -4241.598743 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.145 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.48953 -42.02291 -40.83191 -39.25609 -37.95424 -37.58930 -37.35959 -34.63417 -34.00228 -31.37459 -30.15216 -29.66220 -28.89630 -27.05466 -26.99825 -25.58576 -23.68607 -22.93156 -22.41860 -21.83007 -20.57126 -20.40308 -19.14818 -18.44057 -18.32958 -18.11036 -17.79694 -17.61853 -17.41045 -16.93972 -16.39678 -16.30272 -15.84641 -15.70945 -15.29318 -15.13590 -14.81643 -14.70635 -14.60867 -14.36401 -14.30858 -14.00447 -13.90243 -13.63062 -13.43339 -13.35390 -13.20818 -12.92347 -12.64043 -12.43179 -12.38006 -12.02324 -11.97533 -11.91218 -11.83485 -11.58273 -11.39104 -11.12837 -10.39619 -10.32662 -10.25565 -8.99479 -8.50610 -4.92587 0.29986 0.81184 1.09118 1.33909 1.34785 1.39960 1.62579 1.64738 1.75713 1.99910 2.04944 3.06054 3.10672 3.14761 3.37944 3.46192 3.54844 3.60939 3.69510 3.73903 3.82586 3.88213 3.89897 4.09310 4.11538 4.19467 4.30392 4.33667 4.37481 4.45789 4.46668 4.52439 4.56882 4.61344 4.68729 4.72057 4.80533 4.81774 4.92825 5.01718 5.27485 5.29501 5.33190 5.66917 5.82718 5.87814 5.92053 6.11436 6.30937 6.38695 6.64134 6.67165 6.96417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.112 4.112 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.122 3.878 9 H 0.114 0.886 10 N -0.713 5.713 11 C 0.493 3.507 12 O -0.507 6.507 13 C 0.093 3.907 14 N -0.467 5.467 15 C 0.072 3.928 16 C -0.151 4.151 17 C -0.037 4.037 18 O -0.535 6.535 19 Si 0.679 3.321 20 C -0.086 4.086 21 C -0.065 4.065 22 C -0.146 4.146 23 C -0.097 4.097 24 C -0.127 4.127 25 C 0.109 3.891 26 C -0.131 4.131 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.113 0.887 31 H 0.086 0.914 32 H 0.403 0.597 33 H 0.120 0.880 34 H 0.125 0.875 35 H 0.169 0.831 36 H 0.072 0.928 37 H 0.375 0.625 38 H -0.255 1.255 39 H -0.261 1.261 40 H 0.121 0.879 41 H 0.122 0.878 42 H 0.125 0.875 43 H 0.115 0.885 44 H 0.087 0.913 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.772 -3.741 -6.543 7.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.131 4.131 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.017 3.983 9 H 0.132 0.868 10 N -0.367 5.367 11 C 0.277 3.723 12 O -0.380 6.380 13 C -0.033 4.033 14 N -0.150 5.150 15 C -0.053 4.053 16 C -0.158 4.158 17 C -0.148 4.148 18 O -0.341 6.341 19 Si 0.580 3.420 20 C -0.090 4.090 21 C -0.084 4.084 22 C -0.165 4.165 23 C -0.116 4.116 24 C -0.147 4.147 25 C 0.005 3.995 26 C -0.170 4.170 27 H 0.083 0.917 28 H 0.083 0.917 29 H 0.122 0.878 30 H 0.131 0.869 31 H 0.105 0.895 32 H 0.238 0.762 33 H 0.138 0.862 34 H 0.143 0.857 35 H 0.186 0.814 36 H 0.090 0.910 37 H 0.222 0.778 38 H -0.180 1.180 39 H -0.185 1.185 40 H 0.139 0.861 41 H 0.140 0.860 42 H 0.143 0.857 43 H 0.133 0.867 44 H 0.106 0.894 45 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.187 -2.639 -6.190 6.731 hybrid contribution -0.320 0.271 0.600 0.732 sum -0.508 -2.367 -5.590 6.091 Atomic orbital electron populations 1.23330 0.75882 1.04048 1.02749 1.86515 1.23786 1.33314 1.83784 1.23550 0.91661 0.81459 0.72163 1.90693 1.66966 1.36432 1.44951 1.22652 0.87727 1.00978 1.01767 0.85677 1.23363 0.96938 0.94862 1.01010 1.21799 0.83454 0.96438 0.96653 0.86823 1.45631 1.07254 1.65120 1.18660 1.21094 0.84839 0.79198 0.87196 1.90843 1.85401 1.44051 1.17701 1.21577 0.83812 1.05099 0.92848 1.43162 1.23345 1.18184 1.30311 1.21504 0.90619 0.91871 1.01298 1.19417 1.00280 0.95880 1.00214 1.24021 0.97172 0.99229 0.94331 1.86676 1.48038 1.59926 1.39487 0.95414 0.80345 0.80620 0.85626 1.18945 0.96436 0.95188 0.98422 1.20269 0.99313 0.93834 0.94940 1.20661 0.97561 0.96780 1.01477 1.20818 0.95942 0.99505 0.95361 1.19946 1.01278 0.93175 1.00348 1.18152 0.96602 0.92570 0.92166 1.23388 0.97795 1.01132 0.94670 0.91723 0.91712 0.87816 0.86892 0.89493 0.76184 0.86204 0.85705 0.81367 0.91039 0.77778 1.18009 1.18538 0.86103 0.85952 0.85721 0.86693 0.89409 0.88271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.55 101.05 1.07 1.04 16 2 O -0.36 -0.30 10.57 -39.25 -0.41 -0.72 16 3 C 0.47 0.50 7.49 36.01 0.27 0.76 16 4 O -0.50 -2.04 15.65 -18.75 -0.29 -2.33 16 5 C -0.11 0.26 4.13 -90.96 -0.38 -0.12 16 6 H 0.13 -0.58 8.14 -51.93 -0.42 -1.00 16 7 C -0.12 0.30 7.15 -25.92 -0.19 0.11 16 8 C 0.12 -0.22 4.33 -67.12 -0.29 -0.51 16 9 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 10 N -0.71 2.31 5.26 -53.02 -0.28 2.03 16 11 C 0.49 -0.08 7.90 -10.98 -0.09 -0.17 16 12 O -0.51 -2.78 16.02 5.55 0.09 -2.69 16 13 C 0.09 -0.26 6.48 -5.20 -0.03 -0.29 16 14 N -0.47 -0.69 2.27 -115.71 -0.26 -0.95 16 15 C 0.07 0.13 9.89 -16.73 -0.17 -0.04 16 16 C -0.15 -0.50 5.61 -102.71 -0.58 -1.08 16 17 C -0.04 -0.06 3.05 36.01 0.11 0.05 16 18 O -0.53 -1.76 12.86 -35.23 -0.45 -2.21 16 19 Si 0.68 -0.28 30.79 -169.99 -5.23 -5.52 16 20 C -0.09 -0.39 6.35 -105.14 -0.67 -1.06 16 21 C -0.07 -0.24 10.05 -39.65 -0.40 -0.64 16 22 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 23 C -0.10 -0.21 10.01 -39.54 -0.40 -0.61 16 24 C -0.13 -0.31 9.99 -39.43 -0.39 -0.71 16 25 C 0.11 0.40 6.80 -83.99 -0.57 -0.18 16 26 C -0.13 0.25 7.43 -25.92 -0.19 0.06 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 29 H 0.10 -0.33 8.14 -51.92 -0.42 -0.76 16 30 H 0.11 -0.10 7.44 -51.93 -0.39 -0.48 16 31 H 0.09 -0.32 8.14 -51.93 -0.42 -0.75 16 32 H 0.40 -2.67 8.70 -40.82 -0.36 -3.03 16 33 H 0.12 -0.63 8.14 -51.93 -0.42 -1.06 16 34 H 0.13 -0.78 8.12 -51.93 -0.42 -1.20 16 35 H 0.17 -0.15 6.30 -52.49 -0.33 -0.48 16 36 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 37 H 0.37 -0.41 8.74 45.56 0.40 -0.01 16 38 H -0.26 -0.60 7.04 56.52 0.40 -0.20 16 39 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 40 H 0.12 0.30 8.06 -52.49 -0.42 -0.12 16 41 H 0.12 0.07 8.06 -52.48 -0.42 -0.35 16 42 H 0.12 -0.01 8.06 -52.49 -0.42 -0.44 16 43 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 44 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 LS Contribution 386.77 15.07 5.83 5.83 Total: 0.00 -13.36 386.77 -10.47 -23.83 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -6.17 Total: -13.11 kcal Atomic # 6 Polarization: -0.87 SS G_CDS: -3.29 Total: -4.15 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: -0.54 Total: 1.07 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -1.07 Total: -7.96 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: -5.23 Total: -5.52 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -13.36 -10.47 -23.83 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_9818708.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.849 kcal (2) G-P(sol) polarization free energy of solvation -13.361 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.473 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.833 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds