Wall clock time and date at job start Sat Mar 6 2021 16:05:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34225 * 116.99943 * 2 1 4 4 O 1.20827 * 120.00050 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00142 * 180.02562 * 3 2 1 6 6 H 1.08994 * 112.84987 * 311.19878 * 5 3 2 7 7 C 1.53780 * 113.68670 * 82.46811 * 5 3 2 8 8 C 1.53787 * 87.07936 * 139.99213 * 7 5 3 9 9 H 1.09005 * 113.68766 * 220.00378 * 8 7 5 10 10 N 1.46496 * 113.61428 * 89.11322 * 8 7 5 11 11 C 1.34777 * 120.00078 * 107.50268 * 10 8 7 12 12 O 1.21633 * 120.00182 * 359.97438 * 11 10 8 13 13 C 1.47266 * 120.00100 * 180.02562 * 11 10 8 14 14 C 1.36776 * 126.93945 * 180.02562 * 13 11 10 15 15 C 1.50696 * 125.80304 * 359.97438 * 14 13 11 16 16 N 1.34657 * 108.39353 * 179.70735 * 14 13 11 17 17 C 1.36450 * 110.29864 * 0.44309 * 16 14 13 18 18 C 1.50696 * 125.57371 * 179.81302 * 17 16 14 19 19 O 1.42903 * 109.47131 * 119.69007 * 18 17 16 20 20 Si 1.86305 * 109.47185 * 359.69548 * 18 17 16 21 21 C 1.34488 * 108.85667 * 359.54976 * 17 16 14 22 22 C 1.53774 * 87.08163 * 334.56413 * 8 7 5 23 23 H 1.08997 * 109.46988 * 179.97438 * 1 2 3 24 24 H 1.09008 * 109.47058 * 299.99292 * 1 2 3 25 25 H 1.08996 * 109.47302 * 59.99459 * 1 2 3 26 26 H 1.08994 * 113.61630 * 25.44252 * 7 5 3 27 27 H 1.09000 * 113.61393 * 254.53575 * 7 5 3 28 28 H 0.97000 * 120.00112 * 287.50282 * 10 8 7 29 29 H 1.09007 * 109.46912 * 90.00446 * 15 14 13 30 30 H 1.08999 * 109.47117 * 210.00039 * 15 14 13 31 31 H 1.09000 * 109.47370 * 330.00986 * 15 14 13 32 32 H 0.96997 * 124.85327 * 180.27887 * 16 14 13 33 33 H 1.08999 * 109.47358 * 239.69367 * 18 17 16 34 34 H 0.96700 * 114.00311 * 300.00591 * 19 18 17 35 35 H 1.48499 * 109.99670 * 58.67633 * 20 18 17 36 36 H 1.48497 * 110.00233 * 179.97438 * 20 18 17 37 37 H 1.07996 * 126.83776 * 180.25847 * 21 17 16 38 38 H 1.09004 * 113.61629 * 139.97910 * 22 8 7 39 39 H 1.09003 * 113.62007 * 270.80381 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0239 0.6362 0.7548 7 6 4.1924 1.1232 -1.3970 8 6 5.1819 2.2267 -0.9869 9 1 5.3988 2.9385 -1.7834 10 7 6.3906 1.7180 -0.3339 11 6 7.5676 1.7310 -0.9905 12 8 7.6262 2.1647 -2.1254 13 6 8.7825 1.2191 -0.3344 14 6 10.0424 1.1654 -0.8641 15 6 10.4392 1.6258 -2.2431 16 7 10.8690 0.6367 0.0581 17 6 10.1767 0.3276 1.1926 18 6 10.7634 -0.2851 2.4381 19 8 10.5637 0.5987 3.5432 20 14 12.5882 -0.5677 2.1909 21 6 8.8862 0.6644 1.0196 22 6 4.1077 2.7143 -0.0005 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5139 -0.8899 26 1 3.5255 1.4143 -2.2084 27 1 4.6630 0.1539 -1.5615 28 1 6.3439 1.3717 0.5710 29 1 10.7304 2.6756 -2.2058 30 1 11.2789 1.0282 -2.5980 31 1 9.5954 1.5068 -2.9228 32 1 11.8201 0.4936 -0.0671 33 1 10.2725 -1.2370 2.6407 34 1 10.9744 1.4670 3.4316 35 1 13.2640 0.7181 1.8823 36 1 13.1788 -1.1711 3.4125 37 1 8.0855 0.5493 1.7351 38 1 4.5098 3.0294 0.9624 39 1 3.4184 3.4415 -0.4298 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_9865296.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:59 Heat of formation + Delta-G solvation = -79.575667 kcal Electronic energy + Delta-G solvation = -23478.720597 eV Core-core repulsion = 19775.824830 eV Total energy + Delta-G solvation = -3702.895767 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.54075 -41.86404 -40.45957 -38.85446 -37.96828 -37.25285 -34.28325 -32.84501 -32.04945 -29.41290 -28.97753 -27.09507 -26.84779 -25.55672 -23.68467 -22.31324 -21.60849 -20.76520 -20.24435 -18.86707 -18.72459 -17.93222 -17.61767 -17.31427 -17.02025 -16.76417 -16.61017 -15.88751 -15.69221 -15.32136 -15.05596 -14.84321 -14.57594 -14.43449 -14.12839 -14.02440 -13.86749 -13.62632 -13.43842 -13.39926 -13.08357 -12.83555 -12.77264 -12.65384 -12.21985 -11.83284 -11.74210 -11.72812 -11.24760 -10.97179 -10.62491 -10.07365 -9.85328 -9.18472 -5.27097 0.74041 0.95687 1.20928 1.23254 1.28770 1.67991 1.76083 1.94419 2.34754 2.59955 3.15744 3.24554 3.33991 3.55134 3.70283 3.76919 3.80337 4.02454 4.07697 4.16838 4.19587 4.27273 4.37495 4.45602 4.50064 4.60879 4.64710 4.66983 4.70939 4.75359 4.81457 4.86759 4.96916 5.02678 5.24010 5.43593 5.60494 5.67657 5.82347 6.21121 6.29346 6.64505 6.78575 7.42946 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.505 6.505 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.126 3.874 9 H 0.114 0.886 10 N -0.712 5.712 11 C 0.598 3.402 12 O -0.544 6.544 13 C -0.242 4.242 14 C 0.126 3.874 15 C -0.100 4.100 16 N -0.545 5.545 17 C -0.027 4.027 18 C -0.040 4.040 19 O -0.522 6.522 20 Si 0.668 3.332 21 C -0.128 4.128 22 C -0.126 4.126 23 H 0.103 0.897 24 H 0.063 0.937 25 H 0.064 0.936 26 H 0.097 0.903 27 H 0.087 0.913 28 H 0.401 0.599 29 H 0.081 0.919 30 H 0.068 0.932 31 H 0.105 0.895 32 H 0.414 0.586 33 H 0.130 0.870 34 H 0.378 0.622 35 H -0.255 1.255 36 H -0.246 1.246 37 H 0.147 0.853 38 H 0.085 0.915 39 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.069 -3.655 0.346 4.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.392 6.392 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.171 4.171 8 C 0.020 3.980 9 H 0.132 0.868 10 N -0.363 5.363 11 C 0.387 3.613 12 O -0.423 6.423 13 C -0.252 4.252 14 C 0.008 3.992 15 C -0.158 4.158 16 N -0.144 5.144 17 C -0.135 4.135 18 C -0.151 4.151 19 O -0.328 6.328 20 Si 0.568 3.432 21 C -0.152 4.152 22 C -0.164 4.164 23 H 0.121 0.879 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.116 0.884 27 H 0.106 0.894 28 H 0.236 0.764 29 H 0.099 0.901 30 H 0.087 0.913 31 H 0.123 0.877 32 H 0.253 0.747 33 H 0.147 0.853 34 H 0.226 0.774 35 H -0.180 1.180 36 H -0.170 1.170 37 H 0.165 0.835 38 H 0.104 0.896 39 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 3.502 -3.408 0.085 4.887 hybrid contribution -0.239 0.726 1.142 1.374 sum 3.263 -2.682 1.228 4.399 Atomic orbital electron populations 1.23315 0.76046 1.03954 1.02689 1.86523 1.23656 1.33410 1.83814 1.23606 0.91718 0.81388 0.72038 1.90684 1.66995 1.36438 1.45074 1.22657 0.87473 1.01102 1.01939 0.85746 1.23405 0.97883 1.01379 0.94416 1.21731 0.83598 0.96198 0.96490 0.86801 1.45437 1.07171 1.65112 1.18536 1.17307 0.82082 0.76980 0.84883 1.90764 1.85995 1.47370 1.18167 1.20056 0.92929 1.15663 0.96536 1.20414 0.89243 0.97218 0.92363 1.20667 1.03630 1.01499 0.89964 1.41729 1.10647 1.49859 1.12179 1.20476 0.92987 1.09851 0.90162 1.24368 1.11808 0.95553 0.83375 1.86654 1.77647 1.28263 1.40210 0.95647 0.73854 0.84976 0.88723 1.21788 0.95329 1.02864 0.95250 1.23371 0.97113 0.94720 1.01156 0.87903 0.91775 0.91764 0.88420 0.89401 0.76375 0.90089 0.91332 0.87685 0.74699 0.85279 0.77428 1.17992 1.16954 0.83534 0.89635 0.87025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.61 10.57 -39.25 -0.41 -1.03 16 3 C 0.47 0.96 7.49 36.01 0.27 1.23 16 4 O -0.50 -2.45 15.65 -18.75 -0.29 -2.75 16 5 C -0.11 0.10 4.13 -90.96 -0.38 -0.28 16 6 H 0.12 -0.34 8.14 -51.93 -0.42 -0.76 16 7 C -0.13 0.10 7.43 -25.92 -0.19 -0.09 16 8 C 0.13 -0.04 4.32 -67.12 -0.29 -0.33 16 9 H 0.11 0.13 7.46 -51.93 -0.39 -0.26 16 10 N -0.71 0.22 5.26 -54.14 -0.28 -0.06 16 11 C 0.60 1.43 7.81 -12.59 -0.10 1.33 16 12 O -0.54 -2.90 14.41 5.25 0.08 -2.83 16 13 C -0.24 -0.30 6.29 -103.35 -0.65 -0.95 16 14 C 0.13 0.03 7.17 -81.88 -0.59 -0.56 16 15 C -0.10 0.07 9.88 36.00 0.36 0.43 16 16 N -0.54 0.94 5.41 -5.42 -0.03 0.91 16 17 C -0.03 0.03 6.11 -81.87 -0.50 -0.47 16 18 C -0.04 0.08 2.98 36.00 0.11 0.19 16 19 O -0.52 0.27 12.87 -35.23 -0.45 -0.18 16 20 Si 0.67 -1.99 30.94 -169.99 -5.26 -7.25 16 21 C -0.13 0.03 10.43 -37.50 -0.39 -0.36 16 22 C -0.13 0.12 7.15 -25.92 -0.19 -0.07 16 23 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 24 H 0.06 -0.01 8.13 -51.92 -0.42 -0.43 16 25 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 26 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 27 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.40 -0.97 7.82 -40.82 -0.32 -1.29 16 29 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 30 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 31 H 0.10 0.12 6.46 -51.93 -0.34 -0.21 16 32 H 0.41 -1.71 6.70 -40.82 -0.27 -1.98 16 33 H 0.13 -0.38 7.96 -51.93 -0.41 -0.79 16 34 H 0.38 -1.15 8.70 45.56 0.40 -0.75 16 35 H -0.26 0.29 7.11 56.52 0.40 0.69 16 36 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 37 H 0.15 -0.26 7.69 -52.49 -0.40 -0.66 16 38 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 39 H 0.11 0.01 7.44 -51.93 -0.39 -0.37 16 LS Contribution 334.54 15.07 5.04 5.04 Total: 0.00 -9.15 334.54 -8.21 -17.36 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -5.12 Total: -10.36 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -1.47 Total: 1.14 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.31 Total: 0.85 kcal Atomic # 8 Polarization: -5.70 SS G_CDS: -1.09 Total: -6.78 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.26 Total: -7.25 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -9.15 -8.21 -17.36 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_9865296.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.214 kcal (2) G-P(sol) polarization free energy of solvation -9.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.362 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds