Wall clock time and date at job start Sat Mar 6 2021 16:05:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34225 * 116.99943 * 2 1 4 4 O 1.20827 * 120.00050 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00142 * 180.02562 * 3 2 1 6 6 H 1.08994 * 112.84987 * 311.19878 * 5 3 2 7 7 C 1.53780 * 113.68670 * 82.46811 * 5 3 2 8 8 C 1.53787 * 87.07936 * 139.99213 * 7 5 3 9 9 H 1.09005 * 113.68766 * 220.00378 * 8 7 5 10 10 N 1.46496 * 113.61428 * 89.11322 * 8 7 5 11 11 C 1.34777 * 120.00078 * 107.50268 * 10 8 7 12 12 O 1.21633 * 120.00182 * 359.97438 * 11 10 8 13 13 C 1.47266 * 120.00100 * 180.02562 * 11 10 8 14 14 C 1.36776 * 126.93945 * 180.02562 * 13 11 10 15 15 C 1.50696 * 125.80304 * 359.97438 * 14 13 11 16 16 N 1.34657 * 108.39353 * 179.70735 * 14 13 11 17 17 C 1.36450 * 110.29864 * 0.44309 * 16 14 13 18 18 C 1.50696 * 125.57371 * 179.81302 * 17 16 14 19 19 O 1.42903 * 109.47131 * 119.69007 * 18 17 16 20 20 Si 1.86305 * 109.47185 * 359.69548 * 18 17 16 21 21 C 1.34488 * 108.85667 * 359.54976 * 17 16 14 22 22 C 1.53774 * 87.08163 * 334.56413 * 8 7 5 23 23 H 1.08997 * 109.46988 * 179.97438 * 1 2 3 24 24 H 1.09008 * 109.47058 * 299.99292 * 1 2 3 25 25 H 1.08996 * 109.47302 * 59.99459 * 1 2 3 26 26 H 1.08994 * 113.61630 * 25.44252 * 7 5 3 27 27 H 1.09000 * 113.61393 * 254.53575 * 7 5 3 28 28 H 0.97000 * 120.00112 * 287.50282 * 10 8 7 29 29 H 1.09007 * 109.46912 * 90.00446 * 15 14 13 30 30 H 1.08999 * 109.47117 * 210.00039 * 15 14 13 31 31 H 1.09000 * 109.47370 * 330.00986 * 15 14 13 32 32 H 0.96997 * 124.85327 * 180.27887 * 16 14 13 33 33 H 1.08999 * 109.47358 * 239.69367 * 18 17 16 34 34 H 0.96700 * 114.00311 * 300.00591 * 19 18 17 35 35 H 1.48499 * 109.99670 * 58.67633 * 20 18 17 36 36 H 1.48497 * 110.00233 * 179.97438 * 20 18 17 37 37 H 1.07996 * 126.83776 * 180.25847 * 21 17 16 38 38 H 1.09004 * 113.61629 * 139.97910 * 22 8 7 39 39 H 1.09003 * 113.62007 * 270.80381 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0239 0.6362 0.7548 7 6 4.1924 1.1232 -1.3970 8 6 5.1819 2.2267 -0.9869 9 1 5.3988 2.9385 -1.7834 10 7 6.3906 1.7180 -0.3339 11 6 7.5676 1.7310 -0.9905 12 8 7.6262 2.1647 -2.1254 13 6 8.7825 1.2191 -0.3344 14 6 10.0424 1.1654 -0.8641 15 6 10.4392 1.6258 -2.2431 16 7 10.8690 0.6367 0.0581 17 6 10.1767 0.3276 1.1926 18 6 10.7634 -0.2851 2.4381 19 8 10.5637 0.5987 3.5432 20 14 12.5882 -0.5677 2.1909 21 6 8.8862 0.6644 1.0196 22 6 4.1077 2.7143 -0.0005 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5139 -0.8899 26 1 3.5255 1.4143 -2.2084 27 1 4.6630 0.1539 -1.5615 28 1 6.3439 1.3717 0.5710 29 1 10.7304 2.6756 -2.2058 30 1 11.2789 1.0282 -2.5980 31 1 9.5954 1.5068 -2.9228 32 1 11.8201 0.4936 -0.0671 33 1 10.2725 -1.2370 2.6407 34 1 10.9744 1.4670 3.4316 35 1 13.2640 0.7181 1.8823 36 1 13.1788 -1.1711 3.4125 37 1 8.0855 0.5493 1.7351 38 1 4.5098 3.0294 0.9624 39 1 3.4184 3.4415 -0.4298 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_9865296.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:58 Heat of formation + Delta-G solvation = -80.587194 kcal Electronic energy + Delta-G solvation = -23478.764460 eV Core-core repulsion = 19775.824830 eV Total energy + Delta-G solvation = -3702.939630 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.48779 -41.95302 -40.55573 -38.94388 -37.87004 -37.43063 -34.36783 -32.78491 -32.00202 -29.43157 -28.88412 -27.09961 -26.81714 -25.51080 -23.68251 -22.38914 -21.53089 -20.80935 -20.25482 -18.90160 -18.69714 -18.01055 -17.63192 -17.39566 -17.00800 -16.72364 -16.58060 -15.91332 -15.66918 -15.28129 -15.02698 -14.87623 -14.53651 -14.45746 -14.21583 -13.94647 -13.82183 -13.63930 -13.43051 -13.34532 -13.09601 -12.83535 -12.73482 -12.58823 -12.13214 -11.86647 -11.80285 -11.73710 -11.36539 -11.01555 -10.62098 -10.15078 -9.80088 -9.13596 -5.04888 0.71117 1.06909 1.13013 1.32054 1.47410 1.73113 1.83289 2.03706 2.37278 2.51933 3.25632 3.34944 3.35775 3.67578 3.72096 3.78544 3.90163 4.06999 4.10414 4.26148 4.26306 4.28648 4.51314 4.54784 4.57831 4.65125 4.68869 4.74089 4.74384 4.81092 4.84341 4.91285 5.02089 5.07494 5.29223 5.34434 5.59438 5.71832 5.88040 6.41844 6.46839 6.64507 6.66034 7.34910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.469 3.531 4 O -0.539 6.539 5 C -0.105 4.105 6 H 0.150 0.850 7 C -0.127 4.127 8 C 0.126 3.874 9 H 0.096 0.904 10 N -0.699 5.699 11 C 0.592 3.408 12 O -0.583 6.583 13 C -0.264 4.264 14 C 0.120 3.880 15 C -0.098 4.098 16 N -0.535 5.535 17 C -0.022 4.022 18 C -0.046 4.046 19 O -0.540 6.540 20 Si 0.754 3.246 21 C -0.135 4.135 22 C -0.119 4.119 23 H 0.128 0.872 24 H 0.061 0.939 25 H 0.060 0.940 26 H 0.093 0.907 27 H 0.091 0.909 28 H 0.413 0.587 29 H 0.080 0.920 30 H 0.092 0.908 31 H 0.083 0.917 32 H 0.426 0.574 33 H 0.141 0.859 34 H 0.387 0.613 35 H -0.277 1.277 36 H -0.296 1.296 37 H 0.159 0.841 38 H 0.098 0.902 39 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.705 -4.646 1.039 6.032 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.279 6.279 3 C 0.313 3.687 4 O -0.428 6.428 5 C -0.123 4.123 6 H 0.167 0.833 7 C -0.166 4.166 8 C 0.020 3.980 9 H 0.114 0.886 10 N -0.350 5.350 11 C 0.383 3.617 12 O -0.464 6.464 13 C -0.274 4.274 14 C 0.000 4.000 15 C -0.155 4.155 16 N -0.135 5.135 17 C -0.130 4.130 18 C -0.156 4.156 19 O -0.347 6.347 20 Si 0.658 3.342 21 C -0.159 4.159 22 C -0.157 4.157 23 H 0.146 0.854 24 H 0.080 0.920 25 H 0.078 0.922 26 H 0.112 0.888 27 H 0.109 0.891 28 H 0.251 0.749 29 H 0.099 0.901 30 H 0.111 0.889 31 H 0.102 0.898 32 H 0.267 0.733 33 H 0.158 0.842 34 H 0.236 0.764 35 H -0.203 1.203 36 H -0.223 1.223 37 H 0.177 0.823 38 H 0.117 0.883 39 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 4.122 -4.418 0.793 6.094 hybrid contribution -0.438 1.016 0.969 1.471 sum 3.684 -3.403 1.762 5.316 Atomic orbital electron populations 1.23521 0.75147 1.05572 1.02410 1.86524 1.24694 1.33209 1.83479 1.24125 0.92658 0.80979 0.70900 1.90669 1.67929 1.37458 1.46777 1.22763 0.85702 1.01471 1.02412 0.83278 1.23355 0.97494 1.01235 0.94480 1.21651 0.83732 0.96227 0.96414 0.88582 1.45317 1.06465 1.64324 1.18864 1.17593 0.83000 0.76596 0.84553 1.90742 1.86616 1.49274 1.19808 1.20136 0.92933 1.16844 0.97505 1.20558 0.89404 0.97161 0.92881 1.20625 1.03615 1.01988 0.89275 1.41702 1.11156 1.49020 1.11619 1.20612 0.92823 1.09249 0.90363 1.24597 1.12727 0.95651 0.82584 1.86630 1.78122 1.29127 1.40854 0.94649 0.71399 0.82231 0.85952 1.21973 0.96210 1.02930 0.94811 1.23289 0.96381 0.94579 1.01418 0.85380 0.92006 0.92152 0.88831 0.89059 0.74946 0.90097 0.88894 0.89832 0.73273 0.84193 0.76353 1.20291 1.22255 0.82297 0.88324 0.88237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.18 16 2 O -0.36 -1.20 10.57 -51.37 -0.54 -1.74 16 3 C 0.47 2.05 7.49 71.24 0.53 2.59 16 4 O -0.54 -5.77 15.65 21.96 0.34 -5.42 16 5 C -0.10 0.21 4.13 -11.01 -0.05 0.16 16 6 H 0.15 -1.04 8.14 -2.39 -0.02 -1.06 16 7 C -0.13 0.15 7.43 31.12 0.23 0.38 16 8 C 0.13 0.01 4.32 45.52 0.20 0.21 16 9 H 0.10 0.40 7.46 -2.38 -0.02 0.38 16 10 N -0.70 0.27 5.26 -443.44 -2.33 -2.06 16 11 C 0.59 3.38 7.81 86.62 0.68 4.05 16 12 O -0.58 -7.29 14.41 -4.14 -0.06 -7.35 16 13 C -0.26 -0.71 6.29 -19.04 -0.12 -0.83 16 14 C 0.12 0.04 7.17 41.78 0.30 0.34 16 15 C -0.10 0.11 9.88 71.23 0.70 0.82 16 16 N -0.53 2.37 5.41 -171.07 -0.93 1.44 16 17 C -0.02 0.08 6.11 40.98 0.25 0.33 16 18 C -0.05 0.25 2.98 71.23 0.21 0.46 16 19 O -0.54 1.03 12.87 -148.98 -1.92 -0.88 16 20 Si 0.75 -5.10 30.94 68.60 2.12 -2.98 16 21 C -0.14 0.17 10.43 23.62 0.25 0.42 16 22 C -0.12 0.19 7.15 31.12 0.22 0.41 16 23 H 0.13 -0.78 8.14 -2.39 -0.02 -0.80 16 24 H 0.06 0.00 8.13 -2.38 -0.02 -0.02 16 25 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 26 H 0.09 -0.02 8.10 -2.39 -0.02 -0.04 16 27 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 28 H 0.41 -2.27 7.82 -92.71 -0.73 -2.99 16 29 H 0.08 -0.11 8.14 -2.38 -0.02 -0.12 16 30 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 31 H 0.08 0.32 6.46 -2.39 -0.02 0.31 16 32 H 0.43 -4.12 6.70 -92.71 -0.62 -4.74 16 33 H 0.14 -1.04 7.96 -2.39 -0.02 -1.06 16 34 H 0.39 -2.64 8.70 -74.06 -0.64 -3.28 16 35 H -0.28 0.89 7.11 99.48 0.71 1.59 16 36 H -0.30 -0.51 7.11 99.48 0.71 0.20 16 37 H 0.16 -0.74 7.69 -2.91 -0.02 -0.76 16 38 H 0.10 -0.41 8.14 -2.38 -0.02 -0.43 16 39 H 0.10 0.14 7.44 -2.39 -0.02 0.12 16 Total: 0.00 -22.44 334.54 0.45 -21.99 By element: Atomic # 1 Polarization: -12.67 SS G_CDS: -0.84 Total: -13.51 kcal Atomic # 6 Polarization: 5.92 SS G_CDS: 4.60 Total: 10.53 kcal Atomic # 7 Polarization: 2.64 SS G_CDS: -3.26 Total: -0.62 kcal Atomic # 8 Polarization: -13.23 SS G_CDS: -2.18 Total: -15.40 kcal Atomic # 14 Polarization: -5.10 SS G_CDS: 2.12 Total: -2.98 kcal Total: -22.44 0.45 -21.99 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_9865296.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.600 kcal (2) G-P(sol) polarization free energy of solvation -22.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.038 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.450 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.987 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.587 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds