Wall clock time and date at job start Sat Mar 6 2021 19:37:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35536 * 125.67731 * 2 1 4 4 C 1.35454 * 108.87234 * 180.26347 * 3 2 1 5 5 C 1.50701 * 126.06867 * 179.74390 * 4 3 2 6 6 O 1.42897 * 109.46852 * 120.02709 * 5 4 3 7 7 Si 1.86295 * 109.46949 * 0.02998 * 5 4 3 8 8 C 1.39836 * 107.86353 * 359.77143 * 4 3 2 9 9 C 1.37648 * 125.67858 * 179.86848 * 2 1 3 10 10 C 1.46675 * 126.23396 * 0.02562 * 9 2 1 11 11 O 1.21690 * 119.99822 * 3.99244 * 10 9 2 12 12 N 1.34774 * 120.00093 * 183.98510 * 10 9 2 13 13 C 1.46502 * 119.99880 * 174.29258 * 12 10 9 14 14 H 1.08999 * 112.91032 * 23.74833 * 13 12 10 15 15 C 1.53788 * 113.61318 * 155.00268 * 13 12 10 16 16 C 1.53773 * 87.08110 * 139.97808 * 15 13 12 17 17 H 1.08999 * 113.61499 * 220.01760 * 16 15 13 18 18 O 1.42905 * 113.61667 * 89.20017 * 16 15 13 19 19 C 1.53780 * 87.08568 * 334.56572 * 16 15 13 20 20 H 1.08998 * 109.47191 * 264.43150 * 1 2 3 21 21 H 1.09002 * 109.47028 * 24.42861 * 1 2 3 22 22 H 1.08997 * 109.46802 * 144.43157 * 1 2 3 23 23 H 1.08001 * 125.56489 * 0.07456 * 3 2 1 24 24 H 1.08998 * 109.47374 * 240.02572 * 5 4 3 25 25 H 0.96702 * 114.00161 * 180.02562 * 6 5 4 26 26 H 1.48500 * 110.00456 * 59.99900 * 7 5 4 27 27 H 1.48501 * 109.99969 * 181.31320 * 7 5 4 28 28 H 1.08002 * 126.45739 * 179.97438 * 8 4 3 29 29 H 0.97005 * 119.99877 * 354.28706 * 12 10 9 30 30 H 1.09000 * 113.60806 * 254.52579 * 15 13 12 31 31 H 1.08998 * 113.61578 * 25.42891 * 15 13 12 32 32 H 0.96698 * 113.99910 * 180.02562 * 18 16 15 33 33 H 1.08997 * 113.61569 * 270.89050 * 19 16 15 34 34 H 1.09001 * 113.62050 * 139.97836 * 19 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5522 0.7094 -0.0059 5 6 4.7537 1.6190 -0.0134 6 8 5.5462 1.3708 1.1495 7 14 4.1886 3.3942 -0.0125 8 6 3.5780 -0.6888 -0.0044 9 6 2.2678 -1.1181 0.0026 10 6 1.8124 -2.5124 0.0052 11 8 0.6242 -2.7645 -0.0681 12 7 2.7100 -3.5143 0.0887 13 6 2.2514 -4.8997 0.2175 14 1 1.2426 -5.0502 -0.1670 15 6 3.2668 -5.9348 -0.2949 16 6 2.8772 -6.7997 0.9154 17 1 3.7235 -7.3029 1.3831 18 8 1.7801 -7.6795 0.6609 19 6 2.4716 -5.4938 1.6188 20 1 -0.3633 -0.0997 1.0228 21 1 -0.3633 0.9357 -0.4250 22 1 -0.3633 -0.8359 -0.5978 23 1 1.9082 2.1236 0.0011 24 1 5.3488 1.4275 -0.9063 25 1 6.3380 1.9225 1.2110 26 1 3.3761 3.6680 1.2000 27 1 5.3637 4.3012 -0.0518 28 1 4.4584 -1.3144 -0.0084 29 1 3.6596 -3.3181 0.0635 30 1 2.9940 -6.3767 -1.2532 31 1 4.2987 -5.5849 -0.2674 32 1 1.5302 -8.2258 1.4186 33 1 3.2861 -5.0232 2.1694 34 1 1.5568 -5.5795 2.2053 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_10803934.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:37:22 Heat of formation + Delta-G solvation = -35.772023 kcal Electronic energy + Delta-G solvation = -18636.457492 eV Core-core repulsion = 15537.907145 eV Total energy + Delta-G solvation = -3098.550347 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.56586 -40.98286 -39.44660 -37.78281 -36.32497 -34.44145 -33.64098 -30.88072 -28.38916 -26.79968 -26.08870 -25.36494 -23.32767 -21.32500 -21.02824 -20.22563 -18.73770 -18.39240 -18.33808 -17.27961 -17.00664 -16.71409 -16.06881 -15.94707 -15.41451 -15.27353 -14.94614 -14.65541 -14.34917 -14.00989 -13.70640 -13.58279 -13.51196 -13.26276 -13.21461 -13.04871 -12.52889 -12.31237 -11.94300 -11.47507 -11.20866 -10.79612 -10.38702 -10.18465 -9.68687 -9.27224 -4.86927 0.36606 1.34420 1.53161 1.59122 1.68979 2.03190 2.23082 2.31061 3.10081 3.42066 3.53612 3.65650 3.67551 3.79512 3.93066 3.99894 4.10975 4.16151 4.33693 4.40213 4.50652 4.63595 4.65851 4.69083 4.77321 4.79555 4.92555 4.96805 5.06056 5.18103 5.43277 5.65330 5.87190 6.14022 6.43134 6.71659 6.83827 7.07651 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.413 5.413 3 C 0.033 3.967 4 C -0.182 4.182 5 C -0.047 4.047 6 O -0.560 6.560 7 Si 0.763 3.237 8 C -0.110 4.110 9 C -0.082 4.082 10 C 0.586 3.414 11 O -0.587 6.587 12 N -0.697 5.697 13 C 0.121 3.879 14 H 0.088 0.912 15 C -0.133 4.133 16 C 0.084 3.916 17 H 0.100 0.900 18 O -0.575 6.575 19 C -0.179 4.179 20 H 0.075 0.925 21 H 0.120 0.880 22 H 0.083 0.917 23 H 0.200 0.800 24 H 0.090 0.910 25 H 0.392 0.608 26 H -0.298 1.298 27 H -0.290 1.290 28 H 0.160 0.840 29 H 0.416 0.584 30 H 0.075 0.925 31 H 0.127 0.873 32 H 0.400 0.600 33 H 0.108 0.892 34 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.742 1.442 -0.991 4.131 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.086 5.086 3 C -0.103 4.103 4 C -0.188 4.188 5 C -0.156 4.156 6 O -0.370 6.370 7 Si 0.669 3.331 8 C -0.136 4.136 9 C -0.194 4.194 10 C 0.375 3.625 11 O -0.469 6.469 12 N -0.347 5.347 13 C 0.016 3.984 14 H 0.106 0.894 15 C -0.171 4.171 16 C 0.024 3.976 17 H 0.118 0.882 18 O -0.383 6.383 19 C -0.218 4.218 20 H 0.094 0.906 21 H 0.138 0.862 22 H 0.102 0.898 23 H 0.217 0.783 24 H 0.108 0.892 25 H 0.242 0.758 26 H -0.225 1.225 27 H -0.217 1.217 28 H 0.177 0.823 29 H 0.254 0.746 30 H 0.094 0.906 31 H 0.145 0.855 32 H 0.250 0.750 33 H 0.126 0.874 34 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 2.071 1.802 -1.098 2.957 hybrid contribution 1.162 -0.350 1.313 1.788 sum 3.233 1.452 0.214 3.551 Atomic orbital electron populations 1.22397 0.74774 1.06122 1.04285 1.44004 1.07676 1.04768 1.52103 1.22262 0.89820 0.92492 1.05764 1.18914 0.92999 0.94084 1.12820 1.24241 0.92477 1.08826 0.90090 1.86553 1.40812 1.64930 1.44672 0.94419 0.81377 0.71781 0.85560 1.21429 0.94286 0.95191 1.02730 1.20077 0.91016 0.87528 1.20805 1.17272 0.85446 0.84424 0.75311 1.90774 1.17853 1.85462 1.52808 1.45563 1.10031 1.05544 1.73602 1.22526 0.99361 0.78851 0.97636 0.89357 1.23509 1.00429 0.94272 0.98853 1.22570 0.89614 0.88903 0.96520 0.88197 1.86438 1.52268 1.56442 1.43201 1.24176 1.03014 0.97897 0.96721 0.90598 0.86182 0.89812 0.78332 0.89176 0.75811 1.22530 1.21659 0.82267 0.74563 0.90631 0.85487 0.74976 0.87389 0.91659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.07 10.47 127.77 1.34 1.40 16 2 N -0.41 -1.87 3.16 -534.31 -1.69 -3.55 16 3 C 0.03 0.04 9.92 83.48 0.83 0.87 16 4 C -0.18 -0.47 5.47 -20.12 -0.11 -0.58 16 5 C -0.05 0.05 3.01 71.24 0.21 0.26 16 6 O -0.56 -1.02 12.86 -148.98 -1.92 -2.94 16 7 Si 0.76 -2.34 30.59 68.60 2.10 -0.24 16 8 C -0.11 -0.39 10.29 22.57 0.23 -0.16 16 9 C -0.08 -0.54 6.89 40.35 0.28 -0.26 16 10 C 0.59 5.25 7.77 86.45 0.67 5.92 16 11 O -0.59 -9.28 14.36 -4.32 -0.06 -9.34 16 12 N -0.70 -1.68 5.34 -443.98 -2.37 -4.05 16 13 C 0.12 0.36 4.21 45.52 0.19 0.55 16 14 H 0.09 0.88 7.41 -2.39 -0.02 0.86 16 15 C -0.13 0.27 7.66 31.12 0.24 0.51 16 16 C 0.08 -0.18 5.27 31.12 0.16 -0.02 16 17 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 18 O -0.57 -0.82 13.59 -148.98 -2.03 -2.84 16 19 C -0.18 0.08 7.71 31.12 0.24 0.32 16 20 H 0.08 0.09 8.14 -2.39 -0.02 0.07 16 21 H 0.12 -0.74 8.12 -2.39 -0.02 -0.76 16 22 H 0.08 0.44 6.57 -2.39 -0.02 0.42 16 23 H 0.20 -1.08 6.19 -2.91 -0.02 -1.10 16 24 H 0.09 -0.42 7.96 -2.39 -0.02 -0.44 16 25 H 0.39 -2.42 8.74 -74.06 -0.65 -3.07 16 26 H -0.30 -1.23 7.11 99.48 0.71 -0.52 16 27 H -0.29 -0.43 7.11 99.48 0.71 0.28 16 28 H 0.16 -0.16 7.45 -2.91 -0.02 -0.18 16 29 H 0.42 -1.46 7.63 -92.70 -0.71 -2.17 16 30 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 31 H 0.13 -0.97 8.12 -2.39 -0.02 -0.99 16 32 H 0.40 -2.71 9.12 -74.06 -0.68 -3.39 16 33 H 0.11 -0.36 8.14 -2.39 -0.02 -0.38 16 34 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 Total: 0.00 -23.52 290.80 -2.52 -26.04 By element: Atomic # 1 Polarization: -11.05 SS G_CDS: -0.84 Total: -11.89 kcal Atomic # 6 Polarization: 4.53 SS G_CDS: 4.29 Total: 8.81 kcal Atomic # 7 Polarization: -3.54 SS G_CDS: -4.06 Total: -7.60 kcal Atomic # 8 Polarization: -11.12 SS G_CDS: -4.00 Total: -15.12 kcal Atomic # 14 Polarization: -2.34 SS G_CDS: 2.10 Total: -0.24 kcal Total: -23.52 -2.52 -26.04 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_10803934.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.731 kcal (2) G-P(sol) polarization free energy of solvation -23.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.252 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.042 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds