Wall clock time and date at job start Sat Mar 6 2021 19:37:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35660 * 117.00331 * 2 1 4 4 C 1.38399 * 120.11938 * 0.25832 * 3 2 1 5 5 C 1.38731 * 120.03082 * 180.24921 * 4 3 2 6 6 O 1.35709 * 119.86454 * 179.76609 * 5 4 3 7 7 C 1.42902 * 117.00039 * 359.97438 * 6 5 4 8 8 C 1.39146 * 120.27420 * 359.74802 * 5 4 3 9 9 C 1.50697 * 119.88143 * 180.02562 * 8 5 4 10 10 O 1.42903 * 109.47160 * 74.97607 * 9 8 5 11 11 Si 1.86293 * 109.47000 * 194.97398 * 9 8 5 12 12 C 1.37591 * 120.23643 * 359.97438 * 8 5 4 13 13 C 1.39815 * 119.96644 * 0.02562 * 12 8 5 14 14 C 1.47306 * 120.13363 * 179.97438 * 13 12 8 15 15 O 1.21619 * 119.99535 * 179.97438 * 14 13 12 16 16 N 1.34777 * 119.99964 * 0.02562 * 14 13 12 17 17 C 1.46496 * 119.99614 * 180.02562 * 16 14 13 18 18 H 1.08999 * 112.85241 * 334.66352 * 17 16 14 19 19 C 1.53781 * 113.61833 * 105.86034 * 17 16 14 20 20 C 1.54051 * 86.98510 * 89.15772 * 19 17 16 21 21 H 1.09005 * 113.61227 * 270.88684 * 20 19 17 22 22 O 1.42902 * 113.69429 * 139.99419 * 20 19 17 23 23 C 1.53775 * 87.07702 * 25.43362 * 20 19 17 24 24 H 1.09003 * 109.46903 * 300.00088 * 1 2 3 25 25 H 1.09000 * 109.47239 * 59.99523 * 1 2 3 26 26 H 1.08995 * 109.47584 * 179.97438 * 1 2 3 27 27 H 1.08001 * 119.98441 * 359.97438 * 4 3 2 28 28 H 1.09000 * 109.47035 * 60.00030 * 7 6 5 29 29 H 1.09003 * 109.47466 * 179.97438 * 7 6 5 30 30 H 1.08997 * 109.47188 * 300.00465 * 7 6 5 31 31 H 1.08997 * 109.47026 * 314.97533 * 9 8 5 32 32 H 0.96699 * 113.99837 * 300.00142 * 10 9 8 33 33 H 1.48500 * 110.00536 * 298.68144 * 11 9 8 34 34 H 1.48500 * 110.00080 * 60.00013 * 11 9 8 35 35 H 1.08000 * 120.01568 * 179.97438 * 12 8 5 36 36 H 0.96996 * 119.99887 * 359.97438 * 16 14 13 37 37 H 1.08998 * 113.62201 * 203.65994 * 19 17 16 38 38 H 1.09008 * 113.61217 * 334.57024 * 19 17 16 39 39 H 0.96705 * 114.00165 * 82.47081 * 22 20 19 40 40 H 1.09002 * 113.61452 * 220.02206 * 23 20 19 41 41 H 1.09000 * 113.69190 * 89.13156 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 0.0054 5 6 1.9254 3.6061 0.0002 6 8 1.1854 4.7437 0.0007 7 6 -0.2357 4.5932 0.0062 8 6 3.3147 3.6834 -0.0052 9 6 3.9918 5.0297 -0.0103 10 8 3.8987 5.6146 1.2902 11 14 5.7849 4.8212 -0.4705 12 6 4.0725 2.5350 -0.0049 13 6 3.4462 1.2850 0.0004 14 6 4.2539 0.0531 0.0002 15 8 3.7065 -1.0329 0.0052 16 7 5.5995 0.1296 -0.0045 17 6 6.4027 -1.0956 -0.0053 18 1 5.8771 -1.9466 0.4277 19 6 7.0579 -1.4019 -1.3624 20 6 8.2529 -0.5551 -0.8847 21 1 8.1611 0.5042 -1.1247 22 8 9.5236 -1.0984 -1.2486 23 6 7.8233 -0.9011 0.5507 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3634 -1.0276 -0.0005 27 1 0.2150 2.3165 0.0092 28 1 -0.5396 4.0457 0.8983 29 1 -0.7053 5.5769 0.0065 30 1 -0.5461 4.0422 -0.8815 31 1 3.5034 5.6792 -0.7366 32 1 2.9916 5.7525 1.5954 33 1 6.4697 3.9634 0.5297 34 1 5.8953 4.2138 -1.8211 35 1 5.1506 2.5991 -0.0095 36 1 6.0360 0.9958 -0.0082 37 1 7.2982 -2.4557 -1.5034 38 1 6.5268 -0.9705 -2.2109 39 1 9.7993 -0.8841 -2.1504 40 1 7.9096 -0.0658 1.2456 41 1 8.2718 -1.8180 0.9331 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_12297780.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:37:31 Heat of formation + Delta-G solvation = -126.944532 kcal Electronic energy + Delta-G solvation = -26600.214595 eV Core-core repulsion = 22642.008479 eV Total energy + Delta-G solvation = -3958.206116 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.29090 -41.23138 -40.25917 -39.44771 -38.44818 -37.05248 -36.44866 -34.02926 -32.34723 -31.68185 -29.06620 -28.28070 -26.88134 -26.18441 -25.78864 -24.47800 -23.01909 -21.82823 -20.71399 -20.09753 -19.10157 -18.60844 -18.41930 -17.82603 -17.39984 -17.26624 -16.78577 -16.68834 -16.50539 -16.35415 -15.99370 -15.84654 -15.53402 -15.35997 -15.07150 -14.44016 -14.29455 -13.98977 -13.75718 -13.62376 -13.51479 -13.40914 -12.88444 -12.70726 -12.61243 -12.61021 -12.49133 -12.22226 -11.79556 -11.60874 -11.41852 -11.21857 -10.94921 -10.84313 -10.30467 -10.06604 -9.33467 -4.81529 -0.45077 -0.07099 1.35158 1.52949 1.66393 1.85338 1.89951 1.95862 2.04996 2.42487 3.20453 3.25549 3.33617 3.39894 3.51138 3.56816 3.62435 3.72971 3.89146 3.93508 3.96688 4.03010 4.13424 4.21258 4.22486 4.27200 4.35491 4.48611 4.55933 4.60930 4.64547 4.64925 4.68038 4.79153 4.81001 4.84557 4.89300 4.95399 5.12379 5.39466 5.89049 6.14220 6.29095 6.63334 6.81004 7.02008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.305 6.305 3 C 0.218 3.782 4 C -0.304 4.304 5 C 0.212 3.788 6 O -0.310 6.310 7 C 0.011 3.989 8 C -0.199 4.199 9 C -0.078 4.078 10 O -0.546 6.546 11 Si 0.792 3.208 12 C -0.012 4.012 13 C -0.230 4.230 14 C 0.565 3.435 15 O -0.557 6.557 16 N -0.707 5.707 17 C 0.117 3.883 18 H 0.093 0.907 19 C -0.177 4.177 20 C 0.081 3.919 21 H 0.096 0.904 22 O -0.575 6.575 23 C -0.132 4.132 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.114 0.886 27 H 0.171 0.829 28 H 0.070 0.930 29 H 0.127 0.873 30 H 0.069 0.931 31 H 0.086 0.914 32 H 0.373 0.627 33 H -0.271 1.271 34 H -0.259 1.259 35 H 0.144 0.856 36 H 0.406 0.594 37 H 0.098 0.902 38 H 0.070 0.930 39 H 0.396 0.604 40 H 0.090 0.910 41 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.823 6.796 -1.999 7.626 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.216 6.216 3 C 0.169 3.831 4 C -0.323 4.323 5 C 0.164 3.836 6 O -0.222 6.222 7 C -0.083 4.083 8 C -0.200 4.200 9 C -0.186 4.186 10 O -0.352 6.352 11 Si 0.692 3.308 12 C -0.031 4.031 13 C -0.234 4.234 14 C 0.354 3.646 15 O -0.436 6.436 16 N -0.359 5.359 17 C 0.011 3.989 18 H 0.111 0.889 19 C -0.216 4.216 20 C 0.022 3.978 21 H 0.114 0.886 22 O -0.383 6.383 23 C -0.170 4.170 24 H 0.092 0.908 25 H 0.093 0.907 26 H 0.132 0.868 27 H 0.188 0.812 28 H 0.089 0.911 29 H 0.145 0.855 30 H 0.087 0.913 31 H 0.104 0.896 32 H 0.222 0.778 33 H -0.197 1.197 34 H -0.184 1.184 35 H 0.161 0.839 36 H 0.243 0.757 37 H 0.116 0.884 38 H 0.089 0.911 39 H 0.247 0.753 40 H 0.108 0.892 41 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -1.877 5.210 -1.647 5.777 hybrid contribution -2.050 -0.376 -0.338 2.111 sum -3.927 4.834 -1.985 6.537 Atomic orbital electron populations 1.23522 0.76152 1.05980 1.02868 1.86368 1.23546 1.25721 1.85929 1.18927 0.90714 0.85104 0.88391 1.21482 1.02256 0.90534 1.18022 1.18811 0.90365 0.85370 0.89024 1.86048 1.21513 1.28024 1.86613 1.23540 0.75588 1.06387 1.02752 1.19693 0.91076 0.97101 1.12123 1.25332 1.14760 0.89815 0.88687 1.86678 1.33049 1.83124 1.32370 0.92283 0.74107 0.87319 0.77112 1.20845 0.99373 0.89932 0.92915 1.19134 0.91307 0.93429 1.19552 1.18083 0.82305 0.88562 0.75639 1.90813 1.72133 1.30073 1.50576 1.45531 1.05247 1.09581 1.75554 1.21638 0.91275 0.87865 0.98111 0.88934 1.24169 0.97655 1.02451 0.97330 1.23487 0.82047 0.96675 0.95579 0.88587 1.86488 1.36236 1.78021 1.37554 1.23433 0.92641 1.04447 0.96435 0.90771 0.90745 0.86773 0.81157 0.91117 0.85460 0.91280 0.89640 0.77798 1.19738 1.18404 0.83946 0.75742 0.88351 0.91106 0.75341 0.89167 0.87645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.89 8.56 -68.79 -0.59 -3.48 16 3 C 0.22 1.69 6.70 22.82 0.15 1.84 16 4 C -0.30 -0.51 8.01 22.43 0.18 -0.33 16 5 C 0.21 0.37 6.62 22.61 0.15 0.52 16 6 O -0.31 0.59 9.35 -90.30 -0.84 -0.26 16 7 C 0.01 -0.09 9.80 113.37 1.11 1.02 16 8 C -0.20 -0.63 5.27 -19.80 -0.10 -0.74 16 9 C -0.08 -0.02 2.32 71.23 0.17 0.14 16 10 O -0.55 -0.95 12.65 -148.98 -1.89 -2.83 16 11 Si 0.79 -1.92 30.39 68.60 2.09 0.16 16 12 C -0.01 -0.06 8.14 22.50 0.18 0.13 16 13 C -0.23 -2.01 5.89 -20.00 -0.12 -2.13 16 14 C 0.56 6.62 7.76 86.63 0.67 7.29 16 15 O -0.56 -10.74 14.77 16.87 0.25 -10.49 16 16 N -0.71 -3.69 5.21 -443.42 -2.31 -6.00 16 17 C 0.12 0.53 4.30 45.52 0.20 0.72 16 18 H 0.09 0.80 7.50 -2.39 -0.02 0.78 16 19 C -0.18 -0.42 7.73 31.21 0.24 -0.18 16 20 C 0.08 -0.01 5.10 31.21 0.16 0.15 16 21 H 0.10 -0.35 8.14 -2.38 -0.02 -0.37 16 22 O -0.57 -0.87 13.67 -148.98 -2.04 -2.90 16 23 C -0.13 -0.13 7.65 31.12 0.24 0.11 16 24 H 0.07 -0.35 7.65 -2.39 -0.02 -0.37 16 25 H 0.07 -0.36 7.67 -2.39 -0.02 -0.38 16 26 H 0.11 -0.33 8.14 -2.39 -0.02 -0.35 16 27 H 0.17 -0.76 4.50 -2.91 -0.01 -0.77 16 28 H 0.07 -0.71 7.65 -2.39 -0.02 -0.73 16 29 H 0.13 -1.54 8.14 -2.39 -0.02 -1.56 16 30 H 0.07 -0.68 7.65 -2.39 -0.02 -0.70 16 31 H 0.09 -0.15 7.82 -2.39 -0.02 -0.17 16 32 H 0.37 -0.78 8.58 -74.06 -0.64 -1.42 16 33 H -0.27 -0.24 6.80 99.48 0.68 0.44 16 34 H -0.26 0.10 7.11 99.48 0.71 0.81 16 35 H 0.14 0.20 3.24 -2.91 -0.01 0.19 16 36 H 0.41 0.18 6.72 -92.71 -0.62 -0.45 16 37 H 0.10 0.28 8.14 -2.39 -0.02 0.27 16 38 H 0.07 0.21 8.14 -2.38 -0.02 0.19 16 39 H 0.40 -2.60 9.12 -74.05 -0.68 -3.27 16 40 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 41 H 0.11 0.16 8.14 -2.39 -0.02 0.14 16 Total: 0.00 -22.17 338.71 -1.81 -23.98 By element: Atomic # 1 Polarization: -7.02 SS G_CDS: -0.82 Total: -7.84 kcal Atomic # 6 Polarization: 5.31 SS G_CDS: 4.34 Total: 9.65 kcal Atomic # 7 Polarization: -3.69 SS G_CDS: -2.31 Total: -6.00 kcal Atomic # 8 Polarization: -14.86 SS G_CDS: -5.11 Total: -19.96 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: 2.09 Total: 0.16 kcal Total: -22.17 -1.81 -23.98 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_12297780.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.962 kcal (2) G-P(sol) polarization free energy of solvation -22.169 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.982 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.945 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds