Wall clock time and date at job start Sat Mar 6 2021 19:37:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38236 * 119.99632 * 244.72513 * 4 2 1 6 6 C 1.38238 * 119.99657 * 179.79236 * 5 4 2 7 7 C 1.38229 * 119.99820 * 0.43889 * 6 5 4 8 8 C 1.50700 * 119.99999 * 179.83616 * 7 6 5 9 9 C 1.50702 * 109.46929 * 269.98026 * 8 7 6 10 10 O 1.21282 * 120.00362 * 359.97438 * 9 8 7 11 11 N 1.34780 * 119.99708 * 179.97438 * 9 8 7 12 12 C 1.46504 * 119.99789 * 180.02562 * 11 9 8 13 13 H 1.09005 * 112.85118 * 23.80220 * 12 11 9 14 14 C 1.53780 * 113.61696 * 154.99945 * 12 11 9 15 15 C 1.53773 * 87.08249 * 139.97820 * 14 12 11 16 16 H 1.08999 * 113.61498 * 220.01961 * 15 14 12 17 17 O 1.42900 * 113.61471 * 89.20138 * 15 14 12 18 18 C 1.53777 * 87.08257 * 334.56990 * 15 14 12 19 19 C 1.38233 * 120.00244 * 359.81636 * 7 6 5 20 20 C 1.38234 * 120.00312 * 359.97345 * 19 7 6 21 21 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 22 22 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 23 23 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 24 24 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 25 25 H 1.08000 * 120.00191 * 0.02562 * 5 4 2 26 26 H 1.08000 * 119.99923 * 180.27468 * 6 5 4 27 27 H 1.09000 * 109.47134 * 29.97864 * 8 7 6 28 28 H 1.08996 * 109.47513 * 149.98399 * 8 7 6 29 29 H 0.96998 * 120.00114 * 359.97438 * 11 9 8 30 30 H 1.08998 * 113.61386 * 254.53280 * 14 12 11 31 31 H 1.09006 * 113.61107 * 25.34420 * 14 12 11 32 32 H 0.96696 * 114.00419 * 179.97438 * 17 15 14 33 33 H 1.09003 * 113.61024 * 270.88082 * 18 15 14 34 34 H 1.09005 * 113.61484 * 139.98357 * 18 15 14 35 35 H 1.08010 * 120.00188 * 179.97438 * 19 7 6 36 36 H 1.07999 * 120.00412 * 180.02562 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6435 -0.0134 2.1887 6 6 3.1004 -0.6641 3.3195 7 6 2.8529 -2.0136 3.4879 8 6 3.3542 -2.7238 4.7189 9 6 4.7354 -3.2673 4.4578 10 8 5.2607 -3.0954 3.3782 11 7 5.3868 -3.9445 5.4240 12 6 6.7297 -4.4724 5.1704 13 1 7.2527 -3.9362 4.3785 14 6 7.5687 -4.6603 6.4454 15 6 8.0772 -5.9714 5.8232 16 1 8.1659 -6.7887 6.5389 17 8 9.2476 -5.8076 5.0199 18 6 6.7707 -6.0015 5.0126 19 6 2.1452 -2.7117 2.5273 20 6 1.6845 -2.0602 1.3985 21 1 -0.3934 0.4418 0.7650 22 1 1.7924 -0.5139 -0.8899 23 1 1.5616 2.4678 -1.2086 24 1 1.5878 2.4586 1.2241 25 1 2.8397 1.0402 2.0555 26 1 3.6530 -0.1186 4.0702 27 1 3.3913 -2.0229 5.5529 28 1 2.6810 -3.5451 4.9641 29 1 4.9668 -4.0817 6.2876 30 1 8.3459 -3.9065 6.5716 31 1 6.9700 -4.8055 7.3446 32 1 9.5725 -6.6289 4.6261 33 1 5.9539 -6.5150 5.5199 34 1 6.9038 -6.3308 3.9820 35 1 1.9522 -3.7662 2.6587 36 1 1.1313 -2.6054 0.6482 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_12335836.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:37:36 Heat of formation + Delta-G solvation = -62.323602 kcal Electronic energy + Delta-G solvation = -19303.228396 eV Core-core repulsion = 16140.726457 eV Total energy + Delta-G solvation = -3162.501939 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 264.119 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.36401 -40.55345 -39.48344 -37.67763 -36.24723 -34.19720 -33.60604 -31.89390 -29.78697 -26.87490 -26.23296 -24.83161 -23.77576 -22.19386 -21.41898 -20.85757 -18.63794 -18.42975 -18.04240 -17.35287 -16.91736 -16.61250 -16.27920 -16.14251 -15.97858 -15.42180 -15.18713 -14.73943 -14.47165 -14.42943 -13.92609 -13.75031 -13.58658 -13.37783 -13.18984 -12.98692 -12.82590 -12.30263 -12.20643 -11.94108 -11.53396 -11.51736 -10.98774 -10.75729 -10.52085 -10.03106 -9.81139 -9.58301 -4.89348 0.28844 0.51890 1.34352 1.63652 1.66009 1.99973 2.15307 2.81979 2.94422 3.37239 3.43208 3.58835 3.60807 3.72037 3.79250 3.88091 3.96017 4.03100 4.06697 4.25188 4.39050 4.46930 4.49916 4.50969 4.61489 4.70825 4.73287 4.86911 4.92132 5.01729 5.10013 5.11918 5.42529 5.49948 5.59435 5.62874 6.04899 6.45278 6.47739 6.58674 7.25357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.075 4.075 3 Si 0.686 3.314 4 C -0.117 4.117 5 C -0.116 4.116 6 C -0.100 4.100 7 C -0.063 4.063 8 C -0.104 4.104 9 C 0.514 3.486 10 O -0.525 6.525 11 N -0.725 5.725 12 C 0.130 3.870 13 H 0.119 0.881 14 C -0.141 4.141 15 C 0.081 3.919 16 H 0.075 0.925 17 O -0.550 6.550 18 C -0.185 4.185 19 C -0.104 4.104 20 C -0.090 4.090 21 H 0.375 0.625 22 H 0.118 0.882 23 H -0.257 1.257 24 H -0.261 1.261 25 H 0.127 0.873 26 H 0.124 0.876 27 H 0.105 0.895 28 H 0.104 0.896 29 H 0.401 0.599 30 H 0.085 0.915 31 H 0.099 0.901 32 H 0.385 0.615 33 H 0.091 0.909 34 H 0.078 0.922 35 H 0.122 0.878 36 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.707 -2.614 5.549 6.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.185 4.185 3 Si 0.588 3.412 4 C -0.117 4.117 5 C -0.134 4.134 6 C -0.118 4.118 7 C -0.063 4.063 8 C -0.144 4.144 9 C 0.300 3.700 10 O -0.400 6.400 11 N -0.377 5.377 12 C 0.025 3.975 13 H 0.137 0.863 14 C -0.179 4.179 15 C 0.021 3.979 16 H 0.093 0.907 17 O -0.356 6.356 18 C -0.224 4.224 19 C -0.122 4.122 20 C -0.108 4.108 21 H 0.223 0.777 22 H 0.135 0.865 23 H -0.183 1.183 24 H -0.185 1.185 25 H 0.144 0.856 26 H 0.142 0.858 27 H 0.123 0.877 28 H 0.122 0.878 29 H 0.235 0.765 30 H 0.103 0.897 31 H 0.117 0.883 32 H 0.233 0.767 33 H 0.110 0.890 34 H 0.097 0.903 35 H 0.140 0.860 36 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.888 -1.320 4.368 4.648 hybrid contribution -1.196 -0.983 0.890 1.786 sum -0.308 -2.302 5.258 5.748 Atomic orbital electron populations 1.86601 1.17757 1.80000 1.49261 1.25027 0.83888 1.11048 0.98568 0.94823 0.91823 0.74507 0.80040 1.20252 0.99816 0.94996 0.96654 1.20982 0.98607 0.99571 0.94201 1.20906 0.99205 0.93943 0.97761 1.19271 0.97927 0.93758 0.95364 1.20706 0.94234 1.01611 0.97852 1.20612 0.87405 0.77623 0.84322 1.90762 1.68165 1.57007 1.24047 1.46046 1.17837 1.57184 1.16630 1.22491 0.82517 0.93728 0.98752 0.86267 1.23459 0.99419 0.97678 0.97388 1.22476 0.84693 0.97918 0.92790 0.90711 1.86474 1.43475 1.37484 1.68199 1.24168 0.98693 0.97340 1.02202 1.21011 0.97853 0.99586 0.93756 1.20962 0.98720 0.93734 0.97418 0.77746 0.86458 1.18260 1.18550 0.85606 0.85811 0.87692 0.87761 0.76499 0.89651 0.88284 0.76688 0.89008 0.90328 0.86030 0.85665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.13 12.83 -35.23 -0.45 -1.59 16 2 C -0.08 -0.08 2.80 36.01 0.10 0.02 16 3 Si 0.69 0.11 29.88 -169.99 -5.08 -4.97 16 4 C -0.12 -0.19 5.35 -104.62 -0.56 -0.75 16 5 C -0.12 -0.14 8.67 -39.58 -0.34 -0.48 16 6 C -0.10 -0.12 9.70 -39.58 -0.38 -0.50 16 7 C -0.06 -0.07 4.37 -104.63 -0.46 -0.53 16 8 C -0.10 0.16 5.83 -29.03 -0.17 -0.01 16 9 C 0.51 0.59 7.82 -10.98 -0.09 0.51 16 10 O -0.52 -3.09 15.63 5.56 0.09 -3.00 16 11 N -0.73 0.97 5.36 -53.01 -0.28 0.68 16 12 C 0.13 0.00 4.18 -67.12 -0.28 -0.29 16 13 H 0.12 0.36 7.46 -51.93 -0.39 -0.03 16 14 C -0.14 0.24 7.66 -25.92 -0.20 0.04 16 15 C 0.08 -0.11 5.27 -25.92 -0.14 -0.25 16 16 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 17 O -0.55 -0.10 13.59 -35.23 -0.48 -0.58 16 18 C -0.18 0.21 7.71 -25.92 -0.20 0.01 16 19 C -0.10 -0.16 9.70 -39.58 -0.38 -0.55 16 20 C -0.09 -0.18 9.69 -39.58 -0.38 -0.56 16 21 H 0.38 -0.29 8.70 45.56 0.40 0.10 16 22 H 0.12 0.06 7.96 -51.93 -0.41 -0.35 16 23 H -0.26 -0.84 7.11 56.52 0.40 -0.44 16 24 H -0.26 -0.46 7.01 56.52 0.40 -0.06 16 25 H 0.13 -0.05 4.85 -52.49 -0.25 -0.31 16 26 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 27 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 28 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 29 H 0.40 -1.79 8.73 -40.82 -0.36 -2.15 16 30 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.10 -0.38 8.12 -51.93 -0.42 -0.80 16 32 H 0.39 -1.48 9.12 45.56 0.42 -1.06 16 33 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 35 H 0.12 0.01 8.06 -52.48 -0.42 -0.42 16 36 H 0.13 0.17 8.06 -52.49 -0.42 -0.26 16 LS Contribution 308.02 15.07 4.64 4.64 Total: 0.00 -9.11 308.02 -9.07 -18.18 By element: Atomic # 1 Polarization: -6.01 SS G_CDS: -4.02 Total: -10.03 kcal Atomic # 6 Polarization: 0.14 SS G_CDS: -3.48 Total: -3.34 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.28 Total: 0.68 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.84 Total: -5.16 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: -5.08 Total: -4.97 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -9.11 -9.07 -18.18 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_12335836.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.143 kcal (2) G-P(sol) polarization free energy of solvation -9.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.254 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.181 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.324 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds