Wall clock time and date at job start Sat Mar 6 2021 19:37:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.34851 * 125.89614 * 2 1 4 4 C 1.40950 * 107.46748 * 180.15517 * 3 2 1 5 5 C 1.50699 * 126.26639 * 179.82857 * 4 3 2 6 6 O 1.42892 * 109.47249 * 104.69148 * 5 4 3 7 7 Si 1.86298 * 109.47032 * 344.68534 * 5 4 3 8 8 C 1.34847 * 107.46260 * 359.56799 * 4 3 2 9 9 C 1.50704 * 125.89799 * 180.24019 * 8 4 3 10 10 N 1.36568 * 108.20758 * 0.26056 * 8 4 3 11 11 C 1.40199 * 125.67276 * 179.97438 * 10 8 4 12 12 C 1.38824 * 120.06444 * 294.71996 * 11 10 8 13 13 C 1.38120 * 119.93235 * 179.76444 * 12 11 10 14 14 C 1.38273 * 120.06775 * 0.49731 * 13 12 11 15 15 C 1.50704 * 119.93913 * 179.76477 * 14 13 12 16 16 C 1.50701 * 109.46535 * 270.01842 * 15 14 13 17 17 O 1.21282 * 120.00456 * 359.97438 * 16 15 14 18 18 N 1.34782 * 119.99625 * 179.97438 * 16 15 14 19 19 C 1.46498 * 120.00120 * 180.02562 * 18 16 15 20 20 H 1.09002 * 112.84724 * 334.66224 * 19 18 16 21 21 C 1.53778 * 113.61871 * 105.86108 * 19 18 16 22 22 C 1.54048 * 86.98399 * 89.15969 * 21 19 18 23 23 H 1.08999 * 113.61869 * 270.88900 * 22 21 19 24 24 O 1.42909 * 113.69362 * 139.98894 * 22 21 19 25 25 C 1.53779 * 113.61567 * 203.47349 * 19 18 16 26 26 C 1.38278 * 120.13158 * 359.77967 * 14 13 12 27 27 C 1.38126 * 120.06462 * 359.96043 * 26 14 13 28 28 H 1.09004 * 109.46944 * 270.32620 * 1 2 3 29 29 H 1.08998 * 109.47378 * 30.32444 * 1 2 3 30 30 H 1.08995 * 109.46980 * 150.32607 * 1 2 3 31 31 H 1.08003 * 126.26959 * 359.97438 * 3 2 1 32 32 H 1.09004 * 109.46453 * 224.69217 * 5 4 3 33 33 H 0.96703 * 114.00176 * 299.99748 * 6 5 4 34 34 H 1.48506 * 109.99834 * 58.68765 * 7 5 4 35 35 H 1.48502 * 110.00011 * 180.02562 * 7 5 4 36 36 H 1.09007 * 109.46900 * 90.02198 * 9 8 4 37 37 H 1.08993 * 109.47282 * 210.01776 * 9 8 4 38 38 H 1.09000 * 109.47211 * 330.03045 * 9 8 4 39 39 H 1.07996 * 120.03103 * 0.02562 * 12 11 10 40 40 H 1.08005 * 119.97016 * 180.23205 * 13 12 11 41 41 H 1.08992 * 109.46641 * 30.01451 * 15 14 13 42 42 H 1.08996 * 109.47080 * 150.01920 * 15 14 13 43 43 H 0.96998 * 119.99793 * 359.97438 * 18 16 15 44 44 H 1.08996 * 113.61917 * 203.66574 * 21 19 18 45 45 H 1.09007 * 113.61000 * 334.56693 * 21 19 18 46 46 H 0.96703 * 113.99492 * 82.46668 * 24 22 21 47 47 H 1.08997 * 113.61723 * 25.42599 * 25 19 18 48 48 H 1.08994 * 113.61730 * 156.24839 * 25 19 18 49 49 H 1.07997 * 119.97200 * 179.97438 * 26 14 13 50 50 H 1.07997 * 120.03542 * 179.97438 * 27 26 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6349 0.6468 -0.0036 5 6 4.8647 1.5178 -0.0086 6 8 5.4550 1.5159 1.2927 7 14 4.3910 3.2586 -0.4732 8 6 3.6122 -0.7014 0.0040 9 6 4.8179 -1.6055 0.0086 10 7 2.3079 -1.1062 0.0063 11 6 1.8647 -2.4363 0.0133 12 6 2.1213 -3.2606 -1.0738 13 6 1.6876 -4.5719 -1.0620 14 6 0.9895 -5.0609 0.0268 15 6 0.5131 -6.4907 0.0344 16 6 -0.8675 -6.5631 -0.5654 17 8 -1.4112 -5.5533 -0.9598 18 7 -1.4980 -7.7503 -0.6637 19 6 -2.8398 -7.8210 -1.2473 20 1 -3.3896 -6.8839 -1.1591 21 6 -2.8649 -8.4188 -2.6639 22 6 -3.0266 -9.7956 -1.9920 23 1 -2.0793 -10.2829 -1.7613 24 8 -3.9453 -10.6588 -2.6652 25 6 -3.6439 -9.0517 -0.7960 26 6 0.7274 -4.2406 1.1087 27 6 1.1632 -2.9299 1.1049 28 1 -0.3633 0.0059 1.0277 29 1 -0.3634 0.8870 -0.5188 30 1 -0.3633 -0.8929 -0.5087 31 1 1.9669 2.1205 -0.0004 32 1 5.5811 1.1305 -0.7332 33 1 4.8726 1.8486 1.9893 34 1 3.3905 3.7866 0.4889 35 1 5.5952 4.1274 -0.4823 36 1 5.1088 -1.8180 1.0374 37 1 4.5747 -2.5382 -0.5001 38 1 5.6425 -1.1141 -0.5079 39 1 2.6631 -2.8781 -1.9261 40 1 1.8902 -5.2149 -1.9058 41 1 1.1967 -7.1044 -0.5519 42 1 0.4834 -6.8583 1.0601 43 1 -1.0630 -8.5580 -0.3486 44 1 -3.7315 -8.1149 -3.2509 45 1 -1.9249 -8.3024 -3.2035 46 1 -3.5628 -11.1295 -3.4184 47 1 -3.3326 -9.4459 0.1713 48 1 -4.7232 -8.9199 -0.8718 49 1 0.1816 -4.6251 1.9576 50 1 0.9579 -2.2895 1.9500 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_12335864.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:37:52 Heat of formation + Delta-G solvation = -13.670361 kcal Electronic energy + Delta-G solvation = -31095.743555 eV Core-core repulsion = 26863.096571 eV Total energy + Delta-G solvation = -4232.646984 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.73692 -41.50824 -40.35509 -39.31427 -37.66941 -36.47133 -34.88282 -33.87226 -33.60361 -32.10130 -31.95878 -30.06259 -28.61212 -26.93200 -26.83378 -25.35949 -24.41746 -23.97588 -23.17831 -21.80414 -20.88866 -20.65290 -20.22149 -18.93130 -18.06920 -17.94995 -17.43230 -17.32806 -17.16629 -16.48614 -16.41677 -16.08112 -15.78698 -15.60283 -15.42753 -15.26362 -14.92266 -14.83208 -14.60550 -14.50523 -14.21940 -14.03179 -13.83721 -13.79909 -13.60206 -13.43244 -13.31633 -13.29801 -13.12864 -12.92060 -12.84930 -12.75146 -12.53671 -12.51605 -12.10193 -11.94752 -11.66373 -11.50601 -11.04050 -10.90734 -10.32226 -10.21121 -10.09022 -10.07570 -9.30698 -8.67757 -4.73364 -0.05417 0.26208 1.27279 1.49972 1.55484 1.81220 1.90056 1.93057 1.95805 2.18842 2.58297 3.08201 3.29237 3.42644 3.49285 3.62402 3.66289 3.68472 3.76743 3.78191 3.81887 3.86594 4.03974 4.09834 4.17624 4.24944 4.30748 4.43149 4.43340 4.46053 4.52104 4.59513 4.62514 4.67011 4.68046 4.72005 4.77272 4.79036 4.79975 4.84817 4.88414 4.91249 5.04580 5.08718 5.15460 5.20442 5.34048 5.39393 5.40204 5.50377 5.69705 6.13200 6.30109 6.31706 6.55439 6.61905 6.67239 7.08840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.028 3.972 3 C -0.190 4.190 4 C -0.195 4.195 5 C -0.038 4.038 6 O -0.535 6.535 7 Si 0.694 3.306 8 C 0.054 3.946 9 C -0.084 4.084 10 N -0.400 5.400 11 C 0.119 3.881 12 C -0.107 4.107 13 C -0.091 4.091 14 C -0.060 4.060 15 C -0.104 4.104 16 C 0.517 3.483 17 O -0.524 6.524 18 N -0.717 5.717 19 C 0.121 3.879 20 H 0.110 0.890 21 C -0.180 4.180 22 C 0.075 3.925 23 H 0.081 0.919 24 O -0.558 6.558 25 C -0.135 4.135 26 C -0.091 4.091 27 C -0.106 4.106 28 H 0.070 0.930 29 H 0.082 0.918 30 H 0.065 0.935 31 H 0.142 0.858 32 H 0.107 0.893 33 H 0.373 0.627 34 H -0.262 1.262 35 H -0.263 1.263 36 H 0.072 0.928 37 H 0.062 0.938 38 H 0.082 0.918 39 H 0.130 0.870 40 H 0.130 0.870 41 H 0.108 0.892 42 H 0.108 0.892 43 H 0.402 0.598 44 H 0.100 0.900 45 H 0.073 0.927 46 H 0.381 0.619 47 H 0.080 0.920 48 H 0.105 0.895 49 H 0.130 0.870 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.301 -6.359 -0.939 6.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.080 4.080 3 C -0.214 4.214 4 C -0.201 4.201 5 C -0.148 4.148 6 O -0.341 6.341 7 Si 0.596 3.404 8 C -0.056 4.056 9 C -0.142 4.142 10 N -0.075 5.075 11 C 0.029 3.971 12 C -0.126 4.126 13 C -0.110 4.110 14 C -0.060 4.060 15 C -0.144 4.144 16 C 0.303 3.697 17 O -0.398 6.398 18 N -0.370 5.370 19 C 0.015 3.985 20 H 0.128 0.872 21 C -0.219 4.219 22 C 0.016 3.984 23 H 0.098 0.902 24 O -0.364 6.364 25 C -0.173 4.173 26 C -0.110 4.110 27 C -0.125 4.125 28 H 0.088 0.912 29 H 0.101 0.899 30 H 0.084 0.916 31 H 0.159 0.841 32 H 0.125 0.875 33 H 0.221 0.779 34 H -0.187 1.187 35 H -0.189 1.189 36 H 0.091 0.909 37 H 0.081 0.919 38 H 0.100 0.900 39 H 0.148 0.852 40 H 0.148 0.852 41 H 0.126 0.874 42 H 0.126 0.874 43 H 0.236 0.764 44 H 0.118 0.882 45 H 0.092 0.908 46 H 0.228 0.772 47 H 0.099 0.901 48 H 0.124 0.876 49 H 0.148 0.852 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.730 -5.078 -0.848 5.199 hybrid contribution 0.481 -0.940 0.888 1.380 sum -0.248 -6.018 0.040 6.023 Atomic orbital electron populations 1.20341 0.87903 1.03487 1.02649 1.20397 0.93473 0.84876 1.09246 1.20603 0.91959 0.97638 1.11203 1.19546 0.94728 0.92582 1.13283 1.24246 0.94519 1.08642 0.87416 1.86559 1.43781 1.86842 1.16949 0.94780 0.80331 0.74540 0.90758 1.20242 0.83906 0.93902 1.07545 1.20336 0.93432 0.97512 1.02907 1.41435 1.05575 1.03060 1.57457 1.17654 1.00764 0.83297 0.95354 1.21135 1.00583 0.93817 0.97064 1.20876 0.97473 0.94956 0.97672 1.19327 0.97614 0.94501 0.94596 1.20704 0.94261 0.95497 1.03930 1.20563 0.87453 0.83128 0.78525 1.90772 1.67075 1.34506 1.47467 1.45728 1.17580 1.09837 1.63812 1.21633 0.83503 0.99759 0.93584 0.87229 1.24198 1.03531 0.96911 0.97304 1.23492 0.92523 0.88685 0.93676 0.90167 1.86539 1.39820 1.61635 1.48416 1.23446 1.01831 0.94300 0.97727 1.20877 0.98834 0.92841 0.98408 1.21121 0.98402 0.95883 0.97116 0.91152 0.89919 0.91585 0.84067 0.87464 0.77940 1.18707 1.18880 0.90947 0.91885 0.89952 0.85164 0.85209 0.87414 0.87372 0.76387 0.88189 0.90812 0.77168 0.90124 0.87621 0.85213 0.85334 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.08 9.94 36.01 0.36 0.28 16 2 C 0.03 0.08 6.81 -81.68 -0.56 -0.48 16 3 C -0.19 -0.50 9.27 -39.76 -0.37 -0.87 16 4 C -0.19 -0.54 5.35 -104.80 -0.56 -1.10 16 5 C -0.04 -0.07 2.60 36.01 0.09 0.02 16 6 O -0.54 -1.67 12.88 -35.23 -0.45 -2.12 16 7 Si 0.69 0.73 30.87 -169.99 -5.25 -4.52 16 8 C 0.05 0.16 6.81 -81.68 -0.56 -0.40 16 9 C -0.08 -0.10 9.87 36.01 0.36 0.25 16 10 N -0.40 -1.15 2.79 -52.58 -0.15 -1.29 16 11 C 0.12 0.24 4.83 -83.59 -0.40 -0.16 16 12 C -0.11 -0.12 8.80 -39.41 -0.35 -0.46 16 13 C -0.09 0.00 9.69 -39.61 -0.38 -0.38 16 14 C -0.06 0.02 4.37 -104.59 -0.46 -0.43 16 15 C -0.10 0.32 5.83 -29.03 -0.17 0.15 16 16 C 0.52 -0.16 7.82 -10.98 -0.09 -0.25 16 17 O -0.52 -2.28 15.65 5.56 0.09 -2.20 16 18 N -0.72 1.82 5.26 -53.02 -0.28 1.54 16 19 C 0.12 -0.15 4.29 -67.12 -0.29 -0.43 16 20 H 0.11 0.08 7.50 -51.93 -0.39 -0.31 16 21 C -0.18 0.25 7.73 -25.78 -0.20 0.05 16 22 C 0.08 -0.15 5.10 -25.78 -0.13 -0.29 16 23 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 24 O -0.56 0.23 13.68 -35.23 -0.48 -0.25 16 25 C -0.14 0.26 7.65 -25.92 -0.20 0.06 16 26 C -0.09 -0.01 9.69 -39.61 -0.38 -0.39 16 27 C -0.11 -0.13 9.73 -39.40 -0.38 -0.52 16 28 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 29 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 30 H 0.07 0.11 7.83 -51.93 -0.41 -0.30 16 31 H 0.14 0.20 6.53 -52.48 -0.34 -0.14 16 32 H 0.11 0.12 7.50 -51.93 -0.39 -0.27 16 33 H 0.37 0.26 8.70 45.56 0.40 0.66 16 34 H -0.26 -0.80 7.01 56.52 0.40 -0.40 16 35 H -0.26 -1.05 7.11 56.52 0.40 -0.65 16 36 H 0.07 0.11 8.14 -51.92 -0.42 -0.32 16 37 H 0.06 0.03 6.86 -51.93 -0.36 -0.33 16 38 H 0.08 0.04 7.50 -51.93 -0.39 -0.35 16 39 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 40 H 0.13 -0.24 8.06 -52.48 -0.42 -0.66 16 41 H 0.11 -0.57 8.08 -51.93 -0.42 -0.99 16 42 H 0.11 -0.56 8.08 -51.93 -0.42 -0.98 16 43 H 0.40 -2.17 8.70 -40.82 -0.36 -2.53 16 44 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 46 H 0.38 -1.62 9.12 45.56 0.42 -1.21 16 47 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 48 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 49 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 50 H 0.13 0.11 8.06 -52.49 -0.42 -0.32 16 LS Contribution 415.24 15.07 6.26 6.26 Total: 0.00 -9.94 415.24 -11.87 -21.80 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -6.93 Total: -13.87 kcal Atomic # 6 Polarization: -0.68 SS G_CDS: -4.67 Total: -5.34 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.43 Total: 0.25 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -0.85 Total: -4.57 kcal Atomic # 14 Polarization: 0.73 SS G_CDS: -5.25 Total: -4.52 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -9.94 -11.87 -21.80 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_12335864.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.131 kcal (2) G-P(sol) polarization free energy of solvation -9.936 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.802 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds