Wall clock time and date at job start Sat Mar 6 2021 19:38:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47221 * 2 1 4 4 C 1.50699 * 109.47312 * 120.00468 * 2 1 3 5 5 C 1.38613 * 119.84711 * 74.99620 * 4 2 1 6 6 F 1.35091 * 119.91724 * 359.97438 * 5 4 2 7 7 C 1.38109 * 120.16183 * 180.02562 * 5 4 2 8 8 C 1.39611 * 119.85536 * 359.97438 * 7 5 4 9 9 C 1.47703 * 120.15592 * 179.97438 * 8 7 5 10 10 O 1.21564 * 120.00106 * 180.02562 * 9 8 7 11 11 N 1.34783 * 119.99667 * 359.97438 * 9 8 7 12 12 C 1.46499 * 119.99531 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.85385 * 23.80181 * 12 11 9 14 14 C 1.53781 * 113.61225 * 155.00207 * 12 11 9 15 15 C 1.53786 * 87.17350 * 139.93836 * 14 12 11 16 16 H 1.09000 * 113.61138 * 220.06261 * 15 14 12 17 17 O 1.42894 * 113.61403 * 89.15805 * 15 14 12 18 18 C 1.53782 * 113.61191 * 252.49880 * 12 11 9 19 19 C 1.39841 * 119.69157 * 0.25329 * 8 7 5 20 20 F 1.35102 * 120.08693 * 179.75098 * 19 8 7 21 21 C 1.38243 * 119.83781 * 255.02185 * 4 2 1 22 22 H 0.96701 * 113.99962 * 299.99957 * 1 2 3 23 23 H 1.09002 * 109.46975 * 240.00031 * 2 1 3 24 24 H 1.48501 * 109.99967 * 178.68327 * 3 2 1 25 25 H 1.48505 * 109.99659 * 299.99986 * 3 2 1 26 26 H 1.08002 * 120.07039 * 179.97438 * 7 5 4 27 27 H 0.96997 * 119.99692 * 0.02562 * 11 9 8 28 28 H 1.09002 * 113.61445 * 254.52836 * 14 12 11 29 29 H 1.09002 * 113.61408 * 25.34566 * 14 12 11 30 30 H 0.96703 * 113.99734 * 180.02562 * 17 15 14 31 31 H 1.08997 * 113.61668 * 334.56642 * 18 12 11 32 32 H 1.08998 * 113.61674 * 105.39151 * 18 12 11 33 33 H 1.07992 * 119.92582 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.8679 -2.0933 1.3027 6 9 1.3558 -2.7992 0.2710 7 6 2.3260 -2.7510 2.4274 8 6 2.8545 -2.0202 3.4931 9 6 3.3457 -2.7168 4.6993 10 8 3.8049 -2.0775 5.6258 11 7 3.2839 -4.0612 4.7732 12 6 3.7706 -4.7520 5.9699 13 1 3.7670 -4.1174 6.8560 14 6 3.1203 -6.1274 6.1945 15 6 4.5099 -6.6300 6.6206 16 1 4.7436 -7.6298 6.2547 17 8 4.7721 -6.4730 8.0164 18 6 5.0957 -5.5016 5.7522 19 6 2.9112 -0.6250 3.4156 20 9 3.4164 0.0905 4.4442 21 6 2.4529 0.0201 2.2818 22 1 -0.3933 0.4417 0.7651 23 1 1.7923 -0.5138 -0.8900 24 1 3.5346 1.7702 0.0321 25 1 1.5614 2.4678 -1.2086 26 1 2.2754 -3.8285 2.4824 27 1 2.9171 -4.5711 4.0341 28 1 2.3865 -6.1370 7.0004 29 1 2.7503 -6.5900 5.2795 30 1 5.6447 -6.7870 8.2904 31 1 5.2669 -5.7939 4.7163 32 1 5.9567 -5.0054 6.2000 33 1 2.4985 1.0972 2.2191 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_12360598.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:01 Heat of formation + Delta-G solvation = -143.956846 kcal Electronic energy + Delta-G solvation = -22421.291953 eV Core-core repulsion = 18471.879799 eV Total energy + Delta-G solvation = -3949.412154 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 286.085 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -50.13254 -50.11495 -41.59618 -40.40943 -39.49207 -37.64824 -36.35385 -34.39151 -32.88605 -31.39556 -28.05250 -26.79102 -25.58995 -24.41466 -23.52395 -21.93884 -21.09332 -19.62088 -18.91040 -18.74099 -18.19082 -17.92626 -17.40984 -17.07340 -16.91539 -16.61988 -16.27220 -16.12350 -15.91290 -15.71474 -15.56804 -15.29898 -14.89885 -14.43624 -14.19832 -13.85906 -13.69459 -13.52338 -13.24978 -13.10633 -13.02441 -12.37327 -12.30999 -12.18241 -11.48612 -11.30811 -10.79192 -10.62801 -10.60377 -10.19513 -9.84410 -5.05765 -0.83871 -0.32940 1.15253 1.35249 1.61301 1.84224 1.92817 2.20558 2.76896 2.82284 3.10033 3.10609 3.27123 3.41114 3.50719 3.53658 3.66212 3.77743 3.78895 4.08147 4.17212 4.29649 4.31412 4.45724 4.56598 4.65670 4.67039 4.70266 4.80667 4.90711 4.98069 5.03239 5.34915 5.40432 6.28558 6.67356 6.84241 6.96238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.077 4.077 3 Si 0.778 3.222 4 C -0.097 4.097 5 C 0.100 3.900 6 F -0.129 7.129 7 C -0.077 4.077 8 C -0.149 4.149 9 C 0.556 3.444 10 O -0.564 6.564 11 N -0.696 5.696 12 C 0.118 3.882 13 H 0.087 0.913 14 C -0.132 4.132 15 C 0.081 3.919 16 H 0.101 0.899 17 O -0.576 6.576 18 C -0.179 4.179 19 C 0.140 3.860 20 F -0.123 7.123 21 C -0.120 4.120 22 H 0.399 0.601 23 H 0.115 0.885 24 H -0.280 1.280 25 H -0.290 1.290 26 H 0.181 0.819 27 H 0.417 0.583 28 H 0.074 0.926 29 H 0.130 0.870 30 H 0.400 0.600 31 H 0.112 0.888 32 H 0.064 0.936 33 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.859 -3.401 -2.049 4.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.186 4.186 3 Si 0.681 3.319 4 C -0.098 4.098 5 C 0.081 3.919 6 F -0.107 7.107 7 C -0.096 4.096 8 C -0.154 4.154 9 C 0.343 3.657 10 O -0.443 6.443 11 N -0.349 5.349 12 C 0.013 3.987 13 H 0.105 0.895 14 C -0.170 4.170 15 C 0.022 3.978 16 H 0.119 0.881 17 O -0.385 6.385 18 C -0.217 4.217 19 C 0.119 3.881 20 F -0.101 7.101 21 C -0.138 4.138 22 H 0.250 0.750 23 H 0.132 0.868 24 H -0.207 1.207 25 H -0.217 1.217 26 H 0.198 0.802 27 H 0.257 0.743 28 H 0.093 0.907 29 H 0.148 0.852 30 H 0.250 0.750 31 H 0.130 0.870 32 H 0.083 0.917 33 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -0.575 -2.455 -2.346 3.444 hybrid contribution 0.626 -0.899 -0.378 1.159 sum 0.051 -3.354 -2.724 4.321 Atomic orbital electron populations 1.86555 1.16166 1.82133 1.50584 1.25261 0.86053 1.11423 0.95903 0.93787 0.78297 0.74057 0.85716 1.20588 0.98945 0.92678 0.97611 1.17379 0.99350 0.89174 0.86035 1.91566 1.84426 1.78234 1.56499 1.21331 0.95943 1.02387 0.89924 1.19833 1.06493 0.92550 0.96494 1.18184 0.78262 0.83215 0.86038 1.90868 1.46713 1.66932 1.39818 1.45783 1.63051 1.05328 1.20690 1.22551 0.95762 0.92483 0.87866 0.89454 1.23521 0.96649 0.93489 1.03378 1.22635 0.96258 0.97836 0.81105 0.88150 1.86438 1.41303 1.87217 1.23524 1.24204 0.97232 0.97895 1.02417 1.17827 0.96192 0.88391 0.85680 1.91612 1.84041 1.77489 1.56975 1.20996 0.99989 1.02066 0.90710 0.75010 0.86779 1.20673 1.21710 0.80168 0.74348 0.90684 0.85192 0.74972 0.87001 0.91720 0.80156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.31 12.88 -148.98 -1.92 -0.61 16 2 C -0.08 0.25 2.44 71.24 0.17 0.42 16 3 Si 0.78 -3.84 29.90 68.60 2.05 -1.79 16 4 C -0.10 0.28 5.27 -19.77 -0.10 0.18 16 5 C 0.10 -0.18 7.23 22.33 0.16 -0.02 16 6 F -0.13 -0.14 16.73 44.97 0.75 0.61 16 7 C -0.08 0.33 9.51 22.57 0.21 0.55 16 8 C -0.15 -0.16 5.88 -20.06 -0.12 -0.28 16 9 C 0.56 3.00 7.77 86.74 0.67 3.67 16 10 O -0.56 -8.58 14.94 -3.92 -0.06 -8.64 16 11 N -0.70 1.25 5.31 -443.04 -2.35 -1.10 16 12 C 0.12 0.05 4.18 45.52 0.19 0.24 16 13 H 0.09 0.70 7.46 -2.39 -0.02 0.68 16 14 C -0.13 0.60 7.66 31.12 0.24 0.84 16 15 C 0.08 -0.33 5.29 31.18 0.16 -0.16 16 16 H 0.10 -0.86 8.14 -2.39 -0.02 -0.88 16 17 O -0.58 -0.15 13.59 -148.98 -2.02 -2.18 16 18 C -0.18 0.50 7.71 31.18 0.24 0.74 16 19 C 0.14 0.34 7.28 22.66 0.17 0.50 16 20 F -0.12 -1.04 15.55 44.97 0.70 -0.34 16 21 C -0.12 0.40 8.62 22.28 0.19 0.59 16 22 H 0.40 -4.47 8.70 -74.06 -0.64 -5.11 16 23 H 0.11 -0.19 7.89 -2.39 -0.02 -0.21 16 24 H -0.28 -0.04 7.11 99.48 0.71 0.67 16 25 H -0.29 -0.73 7.11 99.48 0.71 -0.02 16 26 H 0.18 -2.03 6.40 -2.91 -0.02 -2.05 16 27 H 0.42 -3.95 6.76 -92.71 -0.63 -4.57 16 28 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 29 H 0.13 -1.40 8.12 -2.39 -0.02 -1.42 16 30 H 0.40 -3.10 9.12 -74.06 -0.68 -3.77 16 31 H 0.11 -0.75 8.14 -2.39 -0.02 -0.77 16 32 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 33 H 0.18 -1.59 5.10 -2.91 -0.01 -1.61 16 Total: 0.00 -24.60 294.08 -1.36 -25.95 By element: Atomic # 1 Polarization: -18.47 SS G_CDS: -0.70 Total: -19.17 kcal Atomic # 6 Polarization: 5.07 SS G_CDS: 2.19 Total: 7.26 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -2.35 Total: -1.10 kcal Atomic # 8 Polarization: -7.43 SS G_CDS: -4.00 Total: -11.43 kcal Atomic # 9 Polarization: -1.18 SS G_CDS: 1.45 Total: 0.27 kcal Atomic # 14 Polarization: -3.84 SS G_CDS: 2.05 Total: -1.79 kcal Total: -24.60 -1.36 -25.95 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_12360598.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.005 kcal (2) G-P(sol) polarization free energy of solvation -24.595 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.600 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.357 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds