Wall clock time and date at job start Sat Mar 6 2021 19:38:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35654 * 117.00017 * 2 1 4 4 C 1.40136 * 120.15385 * 179.97438 * 3 2 1 5 5 C 1.47540 * 120.19032 * 359.95538 * 4 3 2 6 6 O 1.21589 * 119.99616 * 359.97438 * 5 4 3 7 7 N 1.34774 * 120.00238 * 180.02562 * 5 4 3 8 8 C 1.46499 * 119.99884 * 180.02562 * 7 5 4 9 9 H 1.08994 * 112.90841 * 336.24152 * 8 7 5 10 10 C 1.53777 * 113.61486 * 107.49951 * 8 7 5 11 11 C 1.53785 * 87.08241 * 139.97730 * 10 8 7 12 12 H 1.09002 * 113.61570 * 220.01842 * 11 10 8 13 13 O 1.42901 * 113.69063 * 89.12535 * 11 10 8 14 14 C 1.53781 * 87.08241 * 334.56547 * 11 10 8 15 15 C 1.39700 * 119.62181 * 180.23210 * 4 3 2 16 16 C 1.37796 * 119.90686 * 359.50996 * 15 4 3 17 17 C 1.50696 * 119.85286 * 180.23236 * 16 15 4 18 18 O 1.42902 * 109.47252 * 65.23831 * 17 16 15 19 19 Si 1.86295 * 109.47295 * 185.23623 * 17 16 15 20 20 C 1.38547 * 120.29637 * 0.47317 * 16 15 4 21 21 C 1.38049 * 120.39161 * 359.78037 * 20 16 15 22 22 H 1.09000 * 109.47139 * 300.00163 * 1 2 3 23 23 H 1.09004 * 109.47113 * 60.00130 * 1 2 3 24 24 H 1.08999 * 109.46864 * 180.02562 * 1 2 3 25 25 H 0.97004 * 120.00019 * 359.97438 * 7 5 4 26 26 H 1.08999 * 113.61947 * 25.43156 * 10 8 7 27 27 H 1.08997 * 113.61348 * 254.52371 * 10 8 7 28 28 H 0.96698 * 114.00171 * 80.93851 * 13 11 10 29 29 H 1.09000 * 113.61578 * 139.97748 * 14 11 10 30 30 H 1.09001 * 113.61682 * 270.80327 * 14 11 10 31 31 H 1.07994 * 120.05158 * 179.72769 * 15 4 3 32 32 H 1.09000 * 109.47287 * 305.23688 * 17 16 15 33 33 H 0.96693 * 114.00296 * 59.99556 * 18 17 16 34 34 H 1.48500 * 110.00094 * 58.68496 * 19 17 16 35 35 H 1.48503 * 109.99987 * 180.02562 * 19 17 16 36 36 H 1.08004 * 119.79986 * 179.76301 * 20 16 15 37 37 H 1.08003 * 119.95938 * 179.97438 * 21 20 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2858 0.0005 5 6 4.2550 0.0533 0.0021 6 8 3.7095 -1.0334 0.0034 7 7 5.6005 0.1318 0.0031 8 6 6.4057 -1.0921 0.0041 9 1 5.8709 -1.9514 0.4084 10 6 7.0992 -1.3742 -1.3390 11 6 8.3242 -1.8201 -0.5232 12 1 9.2740 -1.4972 -0.9497 13 8 8.3125 -3.2076 -0.1815 14 6 7.8107 -0.9045 0.6006 15 6 4.0667 2.5363 0.0055 16 6 3.3037 3.6837 -0.0005 17 6 3.9767 5.0321 -0.0005 18 8 4.6997 5.2036 -1.2211 19 14 2.6883 6.3692 0.1511 20 6 1.9206 3.6033 -0.0014 21 6 1.2925 2.3740 -0.0010 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 6.0357 0.9987 0.0025 26 1 7.2747 -0.4795 -1.9364 27 1 6.6368 -2.1805 -1.9083 28 1 8.6124 -3.7903 -0.8925 29 1 7.9226 -1.3317 1.5972 30 1 8.1817 0.1183 0.5344 31 1 5.1445 2.6038 0.0103 32 1 4.6657 5.0943 0.8418 33 1 4.1485 5.1599 -2.0143 34 1 1.9082 6.1835 1.4010 35 1 3.3392 7.7040 0.1517 36 1 1.3303 4.5078 -0.0022 37 1 0.2138 2.3195 -0.0014 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_12496546.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:03 Heat of formation + Delta-G solvation = -92.450428 kcal Electronic energy + Delta-G solvation = -22007.268640 eV Core-core repulsion = 18524.778112 eV Total energy + Delta-G solvation = -3482.490528 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.85537 -40.81566 -39.42007 -39.18623 -37.10494 -36.27230 -34.15101 -32.36254 -31.80428 -28.55538 -26.80056 -26.23218 -26.15233 -24.44907 -22.54438 -21.60333 -20.91280 -19.49582 -18.51497 -18.29136 -18.09389 -17.26494 -16.91806 -16.79513 -16.34614 -16.15866 -15.87886 -15.81033 -15.60347 -15.03828 -14.60389 -14.51998 -14.34295 -13.74056 -13.66015 -13.51004 -13.40050 -13.16374 -13.08963 -12.44222 -12.29223 -12.14171 -12.03271 -11.80585 -11.47337 -11.10333 -10.76886 -10.38207 -10.29503 -10.02700 -9.30849 -4.97416 -0.28658 0.20062 1.34289 1.66320 1.73616 2.00691 2.08854 2.25846 2.65447 3.09866 3.41898 3.48451 3.56744 3.66901 3.67536 3.75522 3.79686 3.96602 4.11330 4.14348 4.28961 4.34788 4.37771 4.51293 4.55805 4.64787 4.66621 4.72296 4.79283 4.90329 4.93958 4.96556 5.05756 5.12008 5.26247 5.47857 5.55474 6.28703 6.49435 6.81470 6.83614 7.18255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.315 6.315 3 C 0.170 3.830 4 C -0.198 4.198 5 C 0.554 3.446 6 O -0.568 6.568 7 N -0.706 5.706 8 C 0.119 3.881 9 H 0.082 0.918 10 C -0.177 4.177 11 C 0.084 3.916 12 H 0.101 0.899 13 O -0.576 6.576 14 C -0.133 4.133 15 C -0.016 4.016 16 C -0.168 4.168 17 C -0.063 4.063 18 O -0.554 6.554 19 Si 0.770 3.230 20 C -0.040 4.040 21 C -0.212 4.212 22 H 0.072 0.928 23 H 0.077 0.923 24 H 0.106 0.894 25 H 0.413 0.587 26 H 0.110 0.890 27 H 0.064 0.936 28 H 0.400 0.600 29 H 0.072 0.928 30 H 0.127 0.873 31 H 0.151 0.849 32 H 0.113 0.887 33 H 0.396 0.604 34 H -0.285 1.285 35 H -0.301 1.301 36 H 0.160 0.840 37 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.668 5.321 -3.410 6.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.227 6.227 3 C 0.121 3.879 4 C -0.202 4.202 5 C 0.343 3.657 6 O -0.448 6.448 7 N -0.359 5.359 8 C 0.014 3.986 9 H 0.101 0.899 10 C -0.217 4.217 11 C 0.024 3.976 12 H 0.119 0.881 13 O -0.384 6.384 14 C -0.171 4.171 15 C -0.035 4.035 16 C -0.168 4.168 17 C -0.174 4.174 18 O -0.362 6.362 19 Si 0.676 3.324 20 C -0.058 4.058 21 C -0.230 4.230 22 H 0.091 0.909 23 H 0.095 0.905 24 H 0.124 0.876 25 H 0.251 0.749 26 H 0.128 0.872 27 H 0.082 0.918 28 H 0.250 0.750 29 H 0.091 0.909 30 H 0.145 0.855 31 H 0.168 0.832 32 H 0.130 0.870 33 H 0.246 0.754 34 H -0.212 1.212 35 H -0.229 1.229 36 H 0.177 0.823 37 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -0.998 5.272 -1.969 5.715 hybrid contribution 0.418 -0.486 -0.074 0.645 sum -0.580 4.786 -2.044 5.237 Atomic orbital electron populations 1.23457 0.76462 1.05463 1.02948 1.86342 1.23291 1.26513 1.86559 1.19443 0.91344 0.85610 0.91453 1.19420 0.91209 0.93926 1.15680 1.18430 0.82862 0.88713 0.75674 1.90807 1.72574 1.30549 1.50884 1.45811 1.05082 1.10156 1.74836 1.22462 0.90476 0.87626 0.98042 0.89944 1.24158 0.97629 1.02910 0.96956 1.22584 0.97359 0.81849 0.95800 0.88136 1.86437 1.90161 1.16970 1.44868 1.23511 0.93160 1.01259 0.99212 1.21112 1.00758 0.89128 0.92497 1.20266 0.93883 0.95994 1.06692 1.25048 1.03301 0.98661 0.90364 1.86472 1.38879 1.95022 1.15788 0.93866 0.78941 0.74026 0.85542 1.21287 0.93661 0.97837 0.92969 1.21488 1.01826 0.90846 1.08865 0.90935 0.90493 0.87559 0.74860 0.87173 0.91766 0.74980 0.90877 0.85472 0.83169 0.86997 0.75433 1.21186 1.22946 0.82254 0.81871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 2 O -0.32 -3.07 8.57 -68.77 -0.59 -3.66 16 3 C 0.17 1.04 6.70 22.84 0.15 1.20 16 4 C -0.20 -1.23 5.89 -20.01 -0.12 -1.34 16 5 C 0.55 6.02 7.76 86.70 0.67 6.70 16 6 O -0.57 -11.55 14.76 16.92 0.25 -11.30 16 7 N -0.71 -2.45 5.30 -443.20 -2.35 -4.80 16 8 C 0.12 0.55 4.18 45.52 0.19 0.74 16 9 H 0.08 1.03 7.46 -2.39 -0.02 1.01 16 10 C -0.18 -0.10 7.71 31.12 0.24 0.14 16 11 C 0.08 -0.10 5.27 31.12 0.16 0.06 16 12 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 13 O -0.58 -1.50 13.59 -148.98 -2.03 -3.53 16 14 C -0.13 0.11 7.66 31.12 0.24 0.35 16 15 C -0.02 0.01 9.16 22.52 0.21 0.21 16 16 C -0.17 0.49 5.35 -19.90 -0.11 0.38 16 17 C -0.06 0.28 2.79 71.23 0.20 0.48 16 18 O -0.55 2.21 12.83 -148.98 -1.91 0.30 16 19 Si 0.77 -4.15 29.78 68.60 2.04 -2.10 16 20 C -0.04 0.17 8.65 22.30 0.19 0.36 16 21 C -0.21 0.27 9.03 22.34 0.20 0.47 16 22 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 23 H 0.08 -0.37 7.66 -2.38 -0.02 -0.38 16 24 H 0.11 -0.18 8.14 -2.39 -0.02 -0.20 16 25 H 0.41 -1.39 6.76 -92.71 -0.63 -2.02 16 26 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 27 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 28 H 0.40 -2.29 9.12 -74.06 -0.68 -2.97 16 29 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 30 H 0.13 -0.86 8.12 -2.39 -0.02 -0.88 16 31 H 0.15 -0.71 6.40 -2.91 -0.02 -0.73 16 32 H 0.11 -0.44 7.96 -2.39 -0.02 -0.46 16 33 H 0.40 -4.55 8.70 -74.06 -0.64 -5.19 16 34 H -0.28 0.15 7.11 99.48 0.71 0.86 16 35 H -0.30 -0.86 7.11 99.48 0.71 -0.15 16 36 H 0.16 -1.59 4.88 -2.91 -0.01 -1.61 16 37 H 0.16 -1.07 6.30 -2.91 -0.02 -1.09 16 Total: 0.00 -26.97 310.76 -2.01 -28.98 By element: Atomic # 1 Polarization: -13.97 SS G_CDS: -0.77 Total: -14.75 kcal Atomic # 6 Polarization: 7.51 SS G_CDS: 3.35 Total: 10.85 kcal Atomic # 7 Polarization: -2.45 SS G_CDS: -2.35 Total: -4.80 kcal Atomic # 8 Polarization: -13.91 SS G_CDS: -4.28 Total: -18.18 kcal Atomic # 14 Polarization: -4.15 SS G_CDS: 2.04 Total: -2.10 kcal Total: -26.97 -2.01 -28.98 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_12496546.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.467 kcal (2) G-P(sol) polarization free energy of solvation -26.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.440 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.984 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.450 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds