Wall clock time and date at job start Sat Mar 6 2021 19:38:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86297 * 109.47416 * 2 1 4 4 C 1.50699 * 109.46953 * 120.00230 * 2 1 3 5 5 C 1.35083 * 126.07593 * 255.19950 * 4 2 1 6 6 N 1.35041 * 107.98163 * 180.25835 * 5 4 2 7 7 C 1.46493 * 125.93405 * 179.70705 * 6 5 4 8 8 C 1.50694 * 109.47372 * 124.99920 * 7 6 5 9 9 O 1.21283 * 120.00286 * 0.02562 * 8 7 6 10 10 N 1.34781 * 120.00467 * 180.02562 * 8 7 6 11 11 C 1.46499 * 120.00462 * 180.02562 * 10 8 7 12 12 H 1.09006 * 112.84668 * 336.19219 * 11 10 8 13 13 C 1.53778 * 113.61556 * 107.50181 * 11 10 8 14 14 C 1.53777 * 87.08322 * 89.11756 * 13 11 10 15 15 H 1.09005 * 113.60974 * 270.88361 * 14 13 11 16 16 O 1.42898 * 113.69168 * 139.98955 * 14 13 11 17 17 C 1.53778 * 113.61427 * 205.00176 * 11 10 8 18 18 N 1.40072 * 108.13533 * 359.72564 * 6 5 4 19 19 C 1.31617 * 108.10985 * 0.02562 * 18 6 5 20 20 C 1.48426 * 126.04119 * 179.97438 * 19 18 6 21 21 C 1.39312 * 120.12084 * 144.74203 * 20 19 18 22 22 C 1.38031 * 119.87715 * 179.81323 * 21 20 19 23 23 C 1.38316 * 120.11906 * 0.44536 * 22 21 20 24 24 C 1.38318 * 120.24023 * 359.78690 * 23 22 21 25 25 C 1.38024 * 120.12053 * 0.02562 * 24 23 22 26 26 H 0.96705 * 113.99670 * 300.00129 * 1 2 3 27 27 H 1.09003 * 109.46812 * 239.99727 * 2 1 3 28 28 H 1.48501 * 109.99990 * 300.00376 * 3 2 1 29 29 H 1.48507 * 109.99747 * 61.31888 * 3 2 1 30 30 H 1.08007 * 126.01061 * 359.97438 * 5 4 2 31 31 H 1.08997 * 109.47464 * 245.00210 * 7 6 5 32 32 H 1.09005 * 109.47143 * 4.99670 * 7 6 5 33 33 H 0.96997 * 119.99240 * 359.97438 * 10 8 7 34 34 H 1.09005 * 113.61022 * 203.66528 * 13 11 10 35 35 H 1.09001 * 113.61507 * 334.56402 * 13 11 10 36 36 H 0.96704 * 113.99556 * 82.46640 * 16 14 13 37 37 H 1.09003 * 113.61666 * 25.42645 * 17 11 10 38 38 H 1.08999 * 113.61696 * 156.33581 * 17 11 10 39 39 H 1.08005 * 120.06569 * 0.02562 * 21 20 19 40 40 H 1.08005 * 119.93952 * 180.19013 * 22 21 20 41 41 H 1.08001 * 119.87665 * 179.76460 * 23 22 21 42 42 H 1.07999 * 119.93837 * 179.97438 * 24 23 22 43 43 H 1.08002 * 120.05656 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4594 -0.1249 2.3272 6 7 2.7915 -1.0994 3.2011 7 6 3.4013 -0.9017 4.5183 8 6 2.5539 -1.5705 5.5697 9 8 1.5405 -2.1553 5.2502 10 7 2.9220 -1.5190 6.8652 11 6 2.0985 -2.1697 7.8873 12 1 1.0599 -2.2918 7.5794 13 6 2.7273 -3.4501 8.4618 14 6 3.4094 -2.5520 9.5072 15 1 4.3806 -2.1724 9.1896 16 8 3.4365 -3.1170 10.8195 17 6 2.2575 -1.5568 9.2886 18 7 2.4521 -2.3321 2.6291 19 6 1.9304 -2.1029 1.4427 20 6 1.4344 -3.1304 0.4934 21 6 0.3250 -2.8657 -0.3066 22 6 -0.1297 -3.8235 -1.1904 23 6 0.5084 -5.0477 -1.2759 24 6 1.6073 -5.3175 -0.4805 25 6 2.0727 -4.3656 0.4039 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 1.5616 2.4679 -1.2085 29 1 1.5880 2.4585 1.2243 30 1 2.5966 0.9360 2.4769 31 1 4.4003 -1.3376 4.5254 32 1 3.4691 0.1653 4.7309 33 1 3.7326 -1.0517 7.1207 34 1 1.9994 -4.1407 8.8877 35 1 3.4262 -3.9366 7.7813 36 1 4.1588 -3.7437 10.9630 37 1 2.5773 -0.5148 9.2758 38 1 1.4014 -1.7299 9.9407 39 1 -0.1763 -1.9115 -0.2379 40 1 -0.9878 -3.6181 -1.8133 41 1 0.1470 -5.7957 -1.9661 42 1 2.1016 -6.2752 -0.5510 43 1 2.9306 -4.5775 1.0248 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_12622748.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:09 Heat of formation + Delta-G solvation = 32.667017 kcal Electronic energy + Delta-G solvation = -27606.195586 eV Core-core repulsion = 23621.207268 eV Total energy + Delta-G solvation = -3984.988318 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.46840 -41.36315 -39.80191 -39.44064 -37.85592 -36.49559 -34.80940 -33.87559 -32.22244 -31.68208 -31.28036 -28.84681 -26.93982 -26.13217 -25.32393 -23.97957 -23.29547 -22.18439 -21.47278 -20.89638 -20.69213 -19.02671 -18.70708 -18.23114 -17.68987 -17.31323 -16.87877 -16.69524 -16.40782 -16.17725 -15.88634 -15.75682 -15.51449 -15.37870 -15.11550 -14.79929 -14.44017 -14.15939 -14.11288 -13.87384 -13.67627 -13.56845 -13.48942 -13.31422 -12.90307 -12.56295 -12.50563 -12.28673 -11.97891 -11.67220 -11.64653 -11.50699 -11.25294 -10.91962 -10.58710 -10.39558 -10.27363 -9.68014 -9.62646 -9.15284 -4.96646 0.27583 0.71237 0.80610 1.18764 1.33865 1.36260 1.56212 1.85009 1.89460 1.99215 3.05893 3.10470 3.23975 3.28528 3.41346 3.44710 3.48331 3.61165 3.67122 3.72242 3.78198 3.80524 4.13744 4.24409 4.28161 4.41659 4.45319 4.51236 4.58252 4.63081 4.64668 4.73641 4.77969 4.78677 4.88725 4.89403 4.95215 5.17414 5.34102 5.37665 5.46065 5.77481 5.80030 5.84193 5.86032 6.20329 6.25812 6.49539 6.55173 6.70396 6.98222 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.036 4.036 3 Si 0.686 3.314 4 C -0.247 4.247 5 C 0.061 3.939 6 N -0.359 5.359 7 C 0.117 3.883 8 C 0.500 3.500 9 O -0.499 6.499 10 N -0.715 5.715 11 C 0.122 3.878 12 H 0.111 0.889 13 C -0.180 4.180 14 C 0.076 3.924 15 H 0.081 0.919 16 O -0.558 6.558 17 C -0.134 4.134 18 N -0.250 5.250 19 C 0.135 3.865 20 C -0.021 4.021 21 C -0.099 4.099 22 C -0.125 4.125 23 C -0.112 4.112 24 C -0.127 4.127 25 C -0.091 4.091 26 H 0.375 0.625 27 H 0.116 0.884 28 H -0.255 1.255 29 H -0.260 1.260 30 H 0.178 0.822 31 H 0.120 0.880 32 H 0.129 0.871 33 H 0.402 0.598 34 H 0.100 0.900 35 H 0.074 0.926 36 H 0.381 0.619 37 H 0.080 0.920 38 H 0.106 0.894 39 H 0.153 0.847 40 H 0.124 0.876 41 H 0.122 0.878 42 H 0.124 0.876 43 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.437 3.739 2.089 7.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.147 4.147 3 Si 0.587 3.413 4 C -0.259 4.259 5 C -0.083 4.083 6 N -0.140 5.140 7 C -0.009 4.009 8 C 0.284 3.716 9 O -0.371 6.371 10 N -0.368 5.368 11 C 0.017 3.983 12 H 0.128 0.872 13 C -0.219 4.219 14 C 0.017 3.983 15 H 0.098 0.902 16 O -0.364 6.364 17 C -0.172 4.172 18 N -0.070 5.070 19 C -0.031 4.031 20 C -0.023 4.023 21 C -0.118 4.118 22 C -0.143 4.143 23 C -0.130 4.130 24 C -0.145 4.145 25 C -0.111 4.111 26 H 0.223 0.777 27 H 0.134 0.866 28 H -0.180 1.180 29 H -0.185 1.185 30 H 0.195 0.805 31 H 0.137 0.863 32 H 0.147 0.853 33 H 0.237 0.763 34 H 0.119 0.881 35 H 0.093 0.907 36 H 0.229 0.771 37 H 0.099 0.901 38 H 0.124 0.876 39 H 0.170 0.830 40 H 0.142 0.858 41 H 0.140 0.860 42 H 0.142 0.858 43 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 5.446 3.399 2.397 6.852 hybrid contribution -0.241 0.255 0.241 0.426 sum 5.205 3.654 2.638 6.885 Atomic orbital electron populations 1.86498 1.18352 1.79171 1.49464 1.24252 0.83173 1.10093 0.97149 0.95170 0.91407 0.74227 0.80451 1.20377 1.13197 0.93235 0.99094 1.22285 1.00265 0.95379 0.90418 1.47827 1.48568 1.04420 1.13233 1.21490 0.97105 1.03450 0.78807 1.20585 0.86596 0.81195 0.83215 1.90851 1.24814 1.40949 1.80527 1.45603 1.28221 1.57002 1.05989 1.21636 0.96556 0.93287 0.86822 0.87151 1.24157 1.01455 0.97686 0.98631 1.23434 0.97545 0.94615 0.82728 0.90152 1.86536 1.55583 1.63181 1.31098 1.23459 0.99577 0.98981 0.95232 1.77795 1.19149 1.01677 1.08374 1.20640 0.97968 0.92373 0.92143 1.17777 0.96682 0.92068 0.95793 1.21888 0.94975 1.00904 0.94014 1.21137 1.00326 0.93683 0.99150 1.21294 0.95710 0.97106 0.98925 1.21079 0.97307 0.99345 0.96770 1.21207 0.99669 0.92331 0.97844 0.77710 0.86589 1.17992 1.18538 0.80497 0.86252 0.85304 0.76347 0.88115 0.90708 0.77119 0.90092 0.87570 0.82951 0.85766 0.86000 0.85834 0.85908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.61 10.11 -35.23 -0.36 -0.96 16 2 C -0.04 -0.01 2.01 36.01 0.07 0.06 16 3 Si 0.69 -1.07 30.81 -169.99 -5.24 -6.31 16 4 C -0.25 -0.40 5.34 -104.76 -0.56 -0.96 16 5 C 0.06 -0.01 9.96 -17.26 -0.17 -0.18 16 6 N -0.36 -0.48 3.40 -62.59 -0.21 -0.69 16 7 C 0.12 -0.33 6.98 -5.20 -0.04 -0.36 16 8 C 0.50 0.18 7.86 -10.99 -0.09 0.10 16 9 O -0.50 -3.01 15.30 5.55 0.09 -2.92 16 10 N -0.71 1.82 5.26 -53.02 -0.28 1.54 16 11 C 0.12 -0.12 4.32 -67.12 -0.29 -0.41 16 12 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 13 C -0.18 0.19 7.71 -25.92 -0.20 -0.01 16 14 C 0.08 -0.15 5.09 -25.92 -0.13 -0.28 16 15 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 16 O -0.56 0.18 13.67 -35.23 -0.48 -0.30 16 17 C -0.13 0.26 7.66 -25.92 -0.20 0.06 16 18 N -0.25 -1.25 11.63 33.43 0.39 -0.87 16 19 C 0.13 0.59 6.74 -82.78 -0.56 0.03 16 20 C -0.02 -0.10 5.80 -104.90 -0.61 -0.70 16 21 C -0.10 -0.38 8.95 -39.26 -0.35 -0.73 16 22 C -0.12 -0.35 10.03 -39.63 -0.40 -0.75 16 23 C -0.11 -0.26 10.04 -39.52 -0.40 -0.66 16 24 C -0.13 -0.34 10.03 -39.63 -0.40 -0.74 16 25 C -0.09 -0.36 9.75 -39.26 -0.38 -0.74 16 26 H 0.37 -0.49 8.70 45.56 0.40 -0.10 16 27 H 0.12 0.05 7.85 -51.93 -0.41 -0.36 16 28 H -0.26 -0.49 7.11 56.52 0.40 -0.08 16 29 H -0.26 0.11 6.99 56.52 0.40 0.50 16 30 H 0.18 -0.65 6.33 -52.48 -0.33 -0.98 16 31 H 0.12 -0.60 8.14 -51.93 -0.42 -1.03 16 32 H 0.13 -0.90 8.07 -51.93 -0.42 -1.31 16 33 H 0.40 -2.41 8.70 -40.82 -0.36 -2.77 16 34 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.38 -1.59 9.12 45.56 0.42 -1.17 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.15 0.54 4.55 -52.48 -0.24 0.30 16 40 H 0.12 0.13 8.06 -52.48 -0.42 -0.29 16 41 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 42 H 0.12 0.08 8.06 -52.49 -0.42 -0.34 16 43 H 0.12 0.42 8.06 -52.49 -0.42 0.00 16 LS Contribution 364.42 15.07 5.49 5.49 Total: 0.00 -12.36 364.42 -10.06 -22.42 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -4.76 Total: -11.12 kcal Atomic # 6 Polarization: -1.59 SS G_CDS: -4.69 Total: -6.28 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.10 Total: -0.02 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -0.75 Total: -4.18 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.24 Total: -6.31 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -12.36 -10.06 -22.42 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_12622748.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.087 kcal (2) G-P(sol) polarization free energy of solvation -12.364 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.723 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.056 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.420 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds