Wall clock time and date at job start Sat Mar 6 2021 19:38:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86300 * 109.47427 * 2 1 4 4 C 1.50704 * 109.47116 * 120.00195 * 2 1 3 5 5 C 1.34828 * 125.65400 * 64.96950 * 4 2 1 6 6 C 1.40800 * 107.04950 * 180.02562 * 5 4 2 7 7 C 1.36105 * 106.73149 * 0.02562 * 6 5 4 8 8 C 1.47564 * 125.93937 * 180.02562 * 7 6 5 9 9 C 1.39919 * 119.95824 * 359.97438 * 8 7 6 10 10 C 1.36429 * 120.27829 * 179.97438 * 9 8 7 11 11 C 1.39874 * 120.18780 * 0.02562 * 10 9 8 12 12 C 1.47297 * 120.04852 * 180.02562 * 11 10 9 13 13 O 1.21628 * 119.99940 * 180.02562 * 12 11 10 14 14 N 1.34773 * 119.99707 * 359.97438 * 12 11 10 15 15 C 1.46503 * 119.99721 * 179.97438 * 14 12 11 16 16 H 1.08997 * 112.85241 * 334.67028 * 15 14 12 17 17 C 1.53785 * 113.61104 * 105.86742 * 15 14 12 18 18 C 1.54047 * 86.98364 * 89.16237 * 17 15 14 19 19 H 1.08998 * 113.61102 * 270.87903 * 18 17 15 20 20 O 1.42900 * 113.69573 * 139.99090 * 18 17 15 21 21 C 1.53773 * 87.08110 * 25.42869 * 18 17 15 22 22 C 1.40412 * 119.90528 * 0.02562 * 11 10 9 23 23 O 1.35680 * 120.13631 * 180.02562 * 22 11 10 24 24 C 1.38276 * 119.72525 * 359.71422 * 22 11 10 25 25 O 1.34228 * 125.65131 * 244.97401 * 4 2 1 26 26 H 0.96699 * 114.00113 * 300.00255 * 1 2 3 27 27 H 1.09003 * 109.47143 * 239.99588 * 2 1 3 28 28 H 1.48502 * 110.00020 * 178.68256 * 3 2 1 29 29 H 1.48497 * 109.99559 * 299.99920 * 3 2 1 30 30 H 1.08003 * 126.47419 * 0.02562 * 5 4 2 31 31 H 1.08000 * 126.63150 * 180.26218 * 6 5 4 32 32 H 1.07995 * 119.86384 * 359.97438 * 9 8 7 33 33 H 1.07996 * 119.90964 * 180.02562 * 10 9 8 34 34 H 0.97001 * 120.00641 * 0.02562 * 14 12 11 35 35 H 1.09004 * 113.61244 * 203.66601 * 17 15 14 36 36 H 1.08990 * 113.61482 * 334.56493 * 17 15 14 37 37 H 0.96705 * 114.00546 * 82.46067 * 20 18 17 38 38 H 1.09001 * 113.61748 * 220.01674 * 21 18 17 39 39 H 1.09003 * 113.61245 * 89.11841 * 21 18 17 40 40 H 0.96698 * 114.00180 * 89.99414 * 23 22 11 41 41 H 1.07998 * 120.09198 * 180.27486 * 24 22 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.7562 -2.0179 1.5096 6 6 2.3797 -2.2627 2.7481 7 6 2.9067 -1.0782 3.1624 8 6 3.6559 -0.8540 4.4137 9 6 3.8766 -1.9173 5.2960 10 6 4.5688 -1.7175 6.4545 11 6 5.0626 -0.4471 6.7687 12 6 5.8101 -0.2350 8.0201 13 8 6.2386 0.8702 8.2925 14 7 6.0182 -1.2653 8.8635 15 6 6.7621 -1.0545 10.1079 16 1 7.4482 -0.2094 10.0529 17 6 5.8734 -1.0458 11.3629 18 6 6.0912 -2.5694 11.4284 19 1 5.3543 -3.1404 10.8636 20 8 6.2800 -3.0661 12.7549 21 6 7.4056 -2.3351 10.6654 22 6 4.8447 0.6257 5.8894 23 8 5.3221 1.8599 6.1892 24 6 4.1473 0.4179 4.7137 25 8 2.6271 -0.1465 2.2302 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 3.5346 1.7702 0.0321 29 1 1.5615 2.4678 -1.2085 30 1 1.2360 -2.7408 0.8986 31 1 2.4330 -3.2084 3.2669 32 1 3.4973 -2.9003 5.0590 33 1 4.7360 -2.5426 7.1310 34 1 5.6761 -2.1467 8.6464 35 1 6.3098 -0.5059 12.2032 36 1 4.8407 -0.7591 11.1647 37 1 5.4569 -3.2155 13.2399 38 1 7.6091 -3.0886 9.9044 39 1 8.2601 -2.1470 11.3154 40 1 6.2147 2.0276 5.8575 41 1 3.9802 1.2378 4.0310 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_12807986.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:15 Heat of formation + Delta-G solvation = -74.206854 kcal Electronic energy + Delta-G solvation = -27323.519972 eV Core-core repulsion = 23138.459931 eV Total energy + Delta-G solvation = -4185.060041 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.118 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -43.78657 -41.74936 -40.62150 -39.09458 -38.14010 -37.85294 -36.38265 -34.45850 -34.08649 -32.95668 -31.35507 -30.49444 -27.25409 -26.87964 -25.55771 -24.35031 -24.10735 -22.56872 -22.13216 -21.42896 -20.65235 -19.71586 -19.09381 -18.58958 -18.38936 -17.70991 -17.51608 -17.23546 -16.65752 -16.46562 -16.39378 -16.11817 -15.83493 -15.66861 -15.55517 -15.06180 -14.82189 -14.40074 -14.26190 -14.06938 -13.92421 -13.74627 -13.63972 -13.50669 -13.46933 -12.90292 -12.86986 -12.79577 -12.48662 -12.14819 -11.88637 -11.60596 -11.18018 -10.87009 -10.84215 -10.78076 -10.63415 -10.15453 -10.01875 -9.07052 -5.09383 -0.84500 0.05133 0.60705 1.07591 1.35437 1.41570 1.70815 1.87134 1.91139 1.94287 2.57340 2.96233 3.12434 3.17806 3.29941 3.33039 3.47003 3.53408 3.57702 3.74172 3.80132 3.83313 3.85821 3.89375 4.09556 4.22244 4.31199 4.46773 4.51639 4.61296 4.64389 4.68394 4.72637 4.78718 4.81977 4.85524 4.93164 4.95873 5.03278 5.11786 5.33037 5.39573 5.45892 5.91343 6.32717 6.35668 6.59556 6.64142 7.14725 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.044 4.044 5 C -0.174 4.174 6 C -0.177 4.177 7 C 0.022 3.978 8 C 0.032 3.968 9 C -0.116 4.116 10 C -0.064 4.064 11 C -0.166 4.166 12 C 0.562 3.438 13 O -0.513 6.513 14 N -0.714 5.714 15 C 0.122 3.878 16 H 0.112 0.888 17 C -0.181 4.181 18 C 0.075 3.925 19 H 0.080 0.920 20 O -0.558 6.558 21 C -0.135 4.135 22 C 0.180 3.820 23 O -0.474 6.474 24 C -0.141 4.141 25 O -0.161 6.161 26 H 0.384 0.616 27 H 0.134 0.866 28 H -0.253 1.253 29 H -0.246 1.246 30 H 0.155 0.845 31 H 0.156 0.844 32 H 0.139 0.861 33 H 0.136 0.864 34 H 0.399 0.601 35 H 0.101 0.899 36 H 0.074 0.926 37 H 0.381 0.619 38 H 0.080 0.920 39 H 0.106 0.894 40 H 0.399 0.601 41 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.628 -3.807 0.004 4.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.600 3.400 4 C -0.095 4.095 5 C -0.193 4.193 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.031 3.969 9 C -0.134 4.134 10 C -0.083 4.083 11 C -0.170 4.170 12 C 0.349 3.651 13 O -0.389 6.389 14 N -0.366 5.366 15 C 0.017 3.983 16 H 0.130 0.870 17 C -0.220 4.220 18 C 0.016 3.984 19 H 0.098 0.902 20 O -0.364 6.364 21 C -0.173 4.173 22 C 0.133 3.867 23 O -0.285 6.285 24 C -0.159 4.159 25 O -0.058 6.058 26 H 0.232 0.768 27 H 0.151 0.849 28 H -0.177 1.177 29 H -0.170 1.170 30 H 0.173 0.827 31 H 0.174 0.826 32 H 0.157 0.843 33 H 0.153 0.847 34 H 0.235 0.765 35 H 0.119 0.881 36 H 0.093 0.907 37 H 0.228 0.772 38 H 0.099 0.901 39 H 0.125 0.875 40 H 0.258 0.742 41 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -0.545 -2.268 -0.666 2.426 hybrid contribution -0.414 -1.491 -0.280 1.573 sum -0.959 -3.759 -0.946 3.994 Atomic orbital electron populations 1.86564 1.16067 1.81733 1.49184 1.24425 0.85274 1.11291 0.92870 0.94209 0.81616 0.76870 0.87297 1.23009 1.00417 0.93895 0.92151 1.21586 1.04016 0.95707 0.98019 1.21912 1.01943 0.98368 0.97342 1.20311 1.03863 0.87528 0.91044 1.17756 0.95418 0.93744 0.89981 1.20702 1.00226 0.98766 0.93744 1.20803 0.95577 0.95442 0.96471 1.20462 1.04755 0.94379 0.97383 1.17974 0.79637 0.84439 0.83016 1.90856 1.49532 1.23291 1.75213 1.45617 1.57588 1.12253 1.21172 1.21634 0.94397 0.99454 0.82823 0.87040 1.24206 1.01407 0.97611 0.98746 1.23489 0.97780 0.92908 0.84224 0.90232 1.86532 1.35905 1.87532 1.26437 1.23454 0.97943 0.96862 0.99025 1.18280 0.93820 0.84080 0.90486 1.84775 1.36408 1.27534 1.79823 1.21603 1.00299 0.97128 0.96895 1.83935 1.57617 1.37890 1.26391 0.76767 0.84890 1.17683 1.16959 0.82686 0.82618 0.84325 0.84676 0.76539 0.88092 0.90709 0.77166 0.90133 0.87520 0.74188 0.83738 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.39 12.88 -35.23 -0.45 -0.07 16 2 C -0.03 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.78 32.11 -169.99 -5.46 -6.24 16 4 C -0.04 -0.01 6.21 -35.52 -0.22 -0.23 16 5 C -0.17 -0.04 10.78 -39.82 -0.43 -0.47 16 6 C -0.18 0.05 10.25 -39.38 -0.40 -0.36 16 7 C 0.02 0.01 7.02 -36.55 -0.26 -0.24 16 8 C 0.03 0.00 5.87 -104.95 -0.62 -0.62 16 9 C -0.12 0.22 9.48 -39.60 -0.38 -0.15 16 10 C -0.06 0.14 9.47 -39.62 -0.38 -0.24 16 11 C -0.17 -0.09 5.89 -104.78 -0.62 -0.71 16 12 C 0.56 1.10 7.75 -12.58 -0.10 1.00 16 13 O -0.51 -2.92 14.76 -16.70 -0.25 -3.16 16 14 N -0.71 0.71 5.21 -54.13 -0.28 0.42 16 15 C 0.12 -0.06 4.30 -67.12 -0.29 -0.34 16 16 H 0.11 0.13 7.50 -51.93 -0.39 -0.26 16 17 C -0.18 0.13 7.73 -25.78 -0.20 -0.07 16 18 C 0.08 -0.12 5.10 -25.78 -0.13 -0.25 16 19 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 20 O -0.56 0.05 13.67 -35.23 -0.48 -0.43 16 21 C -0.13 0.20 7.65 -25.92 -0.20 0.00 16 22 C 0.18 0.25 6.71 -38.75 -0.26 -0.01 16 23 O -0.47 -1.02 11.56 -40.70 -0.47 -1.49 16 24 C -0.14 -0.07 9.65 -39.06 -0.38 -0.44 16 25 O -0.16 -0.16 8.79 4.75 0.04 -0.12 16 26 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 27 H 0.13 -0.18 7.96 -51.93 -0.41 -0.60 16 28 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 29 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 30 H 0.16 -0.14 8.06 -52.48 -0.42 -0.56 16 31 H 0.16 -0.41 7.24 -52.49 -0.38 -0.79 16 32 H 0.14 -0.58 6.95 -52.49 -0.36 -0.95 16 33 H 0.14 -0.71 6.37 -52.49 -0.33 -1.05 16 34 H 0.40 -1.52 6.71 -40.82 -0.27 -1.79 16 35 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 37 H 0.38 -1.49 9.12 45.56 0.42 -1.08 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 39 H 0.11 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.40 -0.62 9.06 45.56 0.41 -0.21 16 41 H 0.14 -0.03 7.90 -52.49 -0.41 -0.45 16 LS Contribution 356.33 15.07 5.37 5.37 Total: 0.00 -10.63 356.33 -9.80 -20.43 By element: Atomic # 1 Polarization: -8.64 SS G_CDS: -3.08 Total: -11.72 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -4.74 Total: -3.00 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: -0.28 Total: 0.42 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -1.61 Total: -5.27 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.46 Total: -6.24 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -10.63 -9.80 -20.43 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_12807986.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.777 kcal (2) G-P(sol) polarization free energy of solvation -10.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.429 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.207 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds