Wall clock time and date at job start Sat Mar 6 2021 19:38:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86294 * 109.47170 * 2 1 4 4 C 1.50700 * 109.46808 * 120.00349 * 2 1 3 5 5 C 1.38335 * 119.86972 * 244.72351 * 4 2 1 6 6 C 1.37997 * 120.13114 * 180.27101 * 5 4 2 7 7 C 1.39405 * 119.86805 * 0.02562 * 6 5 4 8 8 C 1.48274 * 120.12574 * 180.02562 * 7 6 5 9 9 C 1.39507 * 119.97439 * 179.69785 * 8 7 6 10 10 C 1.37671 * 120.02460 * 179.76307 * 9 8 7 11 11 C 1.39710 * 119.97447 * 0.51092 * 10 9 8 12 12 C 1.47714 * 120.02517 * 179.72132 * 11 10 9 13 13 O 1.21577 * 119.99904 * 180.02562 * 12 11 10 14 14 N 1.34778 * 120.00010 * 0.02562 * 12 11 10 15 15 C 1.46500 * 120.00004 * 179.97438 * 14 12 11 16 16 H 1.09008 * 112.84884 * 23.80807 * 15 14 12 17 17 C 1.53779 * 113.61565 * 155.00170 * 15 14 12 18 18 C 1.53776 * 87.08350 * 139.98341 * 17 15 14 19 19 H 1.09001 * 113.61772 * 220.02381 * 18 17 15 20 20 O 1.42901 * 113.61417 * 89.19780 * 18 17 15 21 21 C 1.53778 * 113.61632 * 252.50345 * 15 14 12 22 22 C 1.39710 * 119.94925 * 359.74432 * 11 10 9 23 23 C 1.37668 * 119.97545 * 0.02562 * 22 11 10 24 24 C 1.39400 * 119.74719 * 359.97438 * 7 6 5 25 25 C 1.37998 * 119.87179 * 0.02562 * 24 7 6 26 26 H 0.96692 * 114.00264 * 300.00027 * 1 2 3 27 27 H 1.09005 * 109.47120 * 239.99773 * 2 1 3 28 28 H 1.48501 * 110.00367 * 299.99939 * 3 2 1 29 29 H 1.48506 * 109.99848 * 61.31905 * 3 2 1 30 30 H 1.08001 * 119.93428 * 0.27739 * 5 4 2 31 31 H 1.08001 * 120.06988 * 180.02562 * 6 5 4 32 32 H 1.08000 * 119.99026 * 359.97438 * 9 8 7 33 33 H 1.07994 * 120.01490 * 180.25241 * 10 9 8 34 34 H 0.96994 * 119.99907 * 0.02562 * 14 12 11 35 35 H 1.08998 * 113.61703 * 254.53443 * 17 15 14 36 36 H 1.09008 * 113.61316 * 25.43087 * 17 15 14 37 37 H 0.96699 * 113.99400 * 179.97438 * 20 18 17 38 38 H 1.09005 * 113.61041 * 334.56126 * 21 15 14 39 39 H 1.09000 * 113.61815 * 105.47117 * 21 15 14 40 40 H 1.08006 * 120.01302 * 179.97438 * 22 11 10 41 41 H 1.08006 * 119.98364 * 179.97438 * 23 22 11 42 42 H 1.08000 * 120.06821 * 180.02562 * 24 7 6 43 43 H 1.08001 * 119.94033 * 180.02562 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6438 -0.0106 2.1875 6 6 3.1111 -0.6570 3.3136 7 6 2.8643 -2.0182 3.4854 8 6 3.3632 -2.7184 4.6934 9 6 3.1089 -4.0793 4.8652 10 6 3.5758 -4.7315 5.9841 11 6 4.2954 -4.0277 6.9529 12 6 4.7916 -4.7250 8.1568 13 8 5.4173 -4.1119 8.9999 14 7 4.5507 -6.0409 8.3207 15 6 5.0433 -6.7327 9.5145 16 1 5.2081 -6.0596 10.3560 17 6 4.2315 -7.9869 9.8788 18 6 5.5716 -8.6593 10.2202 19 1 5.6317 -9.6999 9.9016 20 8 5.9778 -8.4699 11.5771 21 6 6.2262 -7.6751 9.2363 22 6 4.5448 -2.6636 6.7825 23 6 4.0810 -2.0145 5.6605 24 6 2.1457 -2.7184 2.5176 25 6 1.6833 -2.0614 1.3956 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5139 -0.8900 28 1 1.5616 2.4679 -1.2085 29 1 1.5879 2.4585 1.2243 30 1 2.8347 1.0439 2.0532 31 1 3.6669 -0.1095 4.0605 32 1 2.5485 -4.6222 4.1184 33 1 3.3824 -5.7859 6.1148 34 1 4.0518 -6.5301 7.6480 35 1 3.5795 -7.8497 10.7414 36 1 3.7205 -8.4385 9.0284 37 1 6.8198 -8.8909 11.7980 38 1 6.2605 -8.0415 8.2103 39 1 7.1846 -7.2863 9.5804 40 1 5.1006 -2.1184 7.5310 41 1 4.2734 -0.9599 5.5288 42 1 1.9511 -3.7730 2.6456 43 1 1.1261 -2.6027 0.6453 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_13158362.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:21 Heat of formation + Delta-G solvation = -29.940956 kcal Electronic energy + Delta-G solvation = -25646.806607 eV Core-core repulsion = 21817.266705 eV Total energy + Delta-G solvation = -3829.539903 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.135 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.56490 -40.94932 -40.06462 -39.00841 -37.65411 -36.28364 -34.40166 -33.64073 -32.61281 -31.64487 -30.82094 -27.24814 -26.87307 -25.64900 -24.74611 -24.06749 -22.67342 -22.28478 -21.35539 -20.99602 -19.28100 -18.64502 -18.34784 -17.82328 -17.27262 -16.93518 -16.43117 -16.37021 -16.12258 -16.08412 -15.66928 -15.51632 -15.13963 -15.10465 -14.99011 -14.59621 -14.33167 -14.24885 -14.10344 -13.72092 -13.60193 -13.47899 -13.31282 -13.11753 -12.81659 -12.64779 -12.30574 -12.07968 -11.99011 -11.58484 -11.53478 -11.03007 -10.79264 -10.78597 -10.62459 -10.12509 -10.06325 -10.04361 -9.13202 -5.00707 -0.72051 0.27792 0.31699 0.47553 1.22843 1.54369 1.84264 1.91986 2.10634 2.56922 2.93957 2.96470 3.29086 3.35500 3.40030 3.51472 3.59961 3.61291 3.71712 3.75396 3.78855 3.89026 3.93953 4.02952 4.17050 4.19786 4.27163 4.45251 4.46419 4.50148 4.55682 4.61806 4.71268 4.78891 4.83789 4.86488 4.92606 4.96953 5.03045 5.09523 5.12962 5.22842 5.34793 5.41006 5.47671 5.57923 5.73994 5.83651 6.33996 6.45201 6.59065 7.19808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.686 3.314 4 C -0.112 4.112 5 C -0.116 4.116 6 C -0.100 4.100 7 C -0.048 4.048 8 C -0.018 4.018 9 C -0.118 4.118 10 C -0.082 4.082 11 C -0.137 4.137 12 C 0.559 3.441 13 O -0.533 6.533 14 N -0.718 5.718 15 C 0.129 3.871 16 H 0.121 0.879 17 C -0.141 4.141 18 C 0.082 3.918 19 H 0.076 0.924 20 O -0.550 6.550 21 C -0.185 4.185 22 C -0.054 4.054 23 C -0.118 4.118 24 C -0.105 4.105 25 C -0.090 4.090 26 H 0.376 0.624 27 H 0.119 0.881 28 H -0.257 1.257 29 H -0.260 1.260 30 H 0.130 0.870 31 H 0.132 0.868 32 H 0.133 0.867 33 H 0.128 0.872 34 H 0.400 0.600 35 H 0.086 0.914 36 H 0.099 0.901 37 H 0.385 0.615 38 H 0.092 0.908 39 H 0.079 0.921 40 H 0.140 0.860 41 H 0.135 0.865 42 H 0.129 0.871 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.986 -3.376 -2.643 4.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.587 3.413 4 C -0.112 4.112 5 C -0.133 4.133 6 C -0.118 4.118 7 C -0.048 4.048 8 C -0.018 4.018 9 C -0.136 4.136 10 C -0.101 4.101 11 C -0.140 4.140 12 C 0.347 3.653 13 O -0.410 6.410 14 N -0.370 5.370 15 C 0.025 3.975 16 H 0.139 0.861 17 C -0.179 4.179 18 C 0.022 3.978 19 H 0.094 0.906 20 O -0.356 6.356 21 C -0.224 4.224 22 C -0.073 4.073 23 C -0.136 4.136 24 C -0.123 4.123 25 C -0.108 4.108 26 H 0.224 0.776 27 H 0.137 0.863 28 H -0.182 1.182 29 H -0.185 1.185 30 H 0.148 0.852 31 H 0.149 0.851 32 H 0.151 0.849 33 H 0.146 0.854 34 H 0.235 0.765 35 H 0.105 0.895 36 H 0.117 0.883 37 H 0.233 0.767 38 H 0.111 0.889 39 H 0.098 0.902 40 H 0.158 0.842 41 H 0.153 0.847 42 H 0.147 0.853 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.752 -2.071 -2.549 3.370 hybrid contribution -0.791 -0.836 0.115 1.156 sum -0.039 -2.907 -2.434 3.792 Atomic orbital electron populations 1.86609 1.17614 1.79973 1.49344 1.25057 0.84035 1.11071 0.98448 0.94946 0.91666 0.74459 0.80234 1.20390 0.99203 0.94946 0.96677 1.21009 0.98429 0.99779 0.94105 1.21227 0.99398 0.93566 0.97629 1.18823 0.98691 0.93491 0.93833 1.18990 0.96212 0.93317 0.93274 1.21160 1.00627 0.93762 0.98059 1.21192 0.96060 0.99556 0.93264 1.19992 1.03040 0.95131 0.95797 1.18321 0.79236 0.81820 0.85901 1.90805 1.40116 1.66159 1.43887 1.45933 1.57663 1.09438 1.23926 1.22542 0.94145 0.92263 0.88580 0.86079 1.23466 0.96569 0.95460 1.02448 1.22475 0.95684 0.97298 0.82370 0.90628 1.86477 1.43733 1.79151 1.26244 1.24178 0.99650 0.97939 1.00610 1.21240 0.96198 0.92931 0.96892 1.21251 0.98313 1.00492 0.93499 1.21312 0.97339 1.00123 0.93508 1.20978 0.98583 0.93714 0.97546 0.77606 0.86297 1.18164 1.18491 0.85233 0.85050 0.84908 0.85442 0.76453 0.89534 0.88279 0.76680 0.88939 0.90198 0.84211 0.84733 0.85298 0.85287 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.45 12.83 -35.23 -0.45 -0.91 16 2 C -0.08 0.05 2.80 36.01 0.10 0.15 16 3 Si 0.69 -0.89 29.87 -169.99 -5.08 -5.97 16 4 C -0.11 0.05 5.36 -104.55 -0.56 -0.51 16 5 C -0.12 0.10 8.65 -39.63 -0.34 -0.24 16 6 C -0.10 0.06 9.43 -39.24 -0.37 -0.30 16 7 C -0.05 0.00 5.88 -104.90 -0.62 -0.61 16 8 C -0.02 0.00 5.88 -104.83 -0.62 -0.62 16 9 C -0.12 0.11 9.41 -39.32 -0.37 -0.26 16 10 C -0.08 0.09 9.52 -39.24 -0.37 -0.29 16 11 C -0.14 -0.17 5.88 -104.93 -0.62 -0.79 16 12 C 0.56 1.61 7.77 -12.39 -0.10 1.51 16 13 O -0.53 -3.63 15.93 5.30 0.08 -3.54 16 14 N -0.72 0.06 5.30 -54.00 -0.29 -0.23 16 15 C 0.13 0.07 4.18 -67.12 -0.28 -0.21 16 16 H 0.12 0.40 7.46 -51.92 -0.39 0.01 16 17 C -0.14 0.19 7.66 -25.92 -0.20 -0.01 16 18 C 0.08 -0.10 5.27 -25.92 -0.14 -0.24 16 19 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 20 O -0.55 -0.15 13.59 -35.23 -0.48 -0.63 16 21 C -0.18 0.15 7.71 -25.92 -0.20 -0.05 16 22 C -0.05 -0.07 9.58 -39.24 -0.38 -0.45 16 23 C -0.12 -0.01 9.41 -39.32 -0.37 -0.38 16 24 C -0.11 0.06 9.43 -39.24 -0.37 -0.31 16 25 C -0.09 0.02 9.67 -39.63 -0.38 -0.36 16 26 H 0.38 -0.70 8.70 45.56 0.40 -0.30 16 27 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 28 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 29 H -0.26 -0.15 7.01 56.52 0.40 0.24 16 30 H 0.13 -0.31 4.82 -52.49 -0.25 -0.56 16 31 H 0.13 -0.32 6.19 -52.49 -0.33 -0.64 16 32 H 0.13 -0.40 6.19 -52.49 -0.32 -0.72 16 33 H 0.13 -0.50 6.39 -52.49 -0.34 -0.84 16 34 H 0.40 -1.22 6.74 -40.82 -0.28 -1.49 16 35 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.10 -0.35 8.12 -51.92 -0.42 -0.77 16 37 H 0.39 -1.45 9.12 45.56 0.42 -1.04 16 38 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.14 0.21 7.64 -52.48 -0.40 -0.19 16 41 H 0.13 -0.26 6.19 -52.48 -0.32 -0.58 16 42 H 0.13 -0.31 6.19 -52.49 -0.33 -0.63 16 43 H 0.13 -0.12 8.06 -52.49 -0.42 -0.55 16 LS Contribution 357.46 15.07 5.39 5.39 Total: 0.00 -9.44 357.46 -11.29 -20.73 By element: Atomic # 1 Polarization: -6.59 SS G_CDS: -4.29 Total: -10.88 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: -6.18 Total: -3.96 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -0.29 Total: -0.23 kcal Atomic # 8 Polarization: -4.23 SS G_CDS: -0.85 Total: -5.08 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.08 Total: -5.97 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -9.44 -11.29 -20.73 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_13158362.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.215 kcal (2) G-P(sol) polarization free energy of solvation -9.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.726 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds