Wall clock time and date at job start Sat Mar 6 2021 19:38:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86302 * 109.47074 * 2 1 4 4 C 1.50707 * 109.47192 * 119.99617 * 2 1 3 5 5 C 1.34184 * 126.54538 * 255.04617 * 4 2 1 6 6 N 1.36862 * 109.97067 * 179.97438 * 5 4 2 7 7 C 1.37403 * 109.97978 * 359.97438 * 6 5 4 8 8 C 1.39326 * 133.24912 * 179.97438 * 7 6 5 9 9 C 1.36349 * 120.23681 * 180.02562 * 8 7 6 10 10 C 1.40183 * 120.66744 * 359.92191 * 9 8 7 11 11 C 1.47653 * 119.97398 * 180.02562 * 10 9 8 12 12 O 1.21575 * 120.00135 * 180.02562 * 11 10 9 13 13 N 1.34781 * 119.99605 * 0.02927 * 11 10 9 14 14 C 1.46503 * 119.99448 * 180.02562 * 13 11 10 15 15 H 1.08996 * 112.85335 * 23.80087 * 14 13 11 16 16 C 1.53780 * 113.61533 * 155.00081 * 14 13 11 17 17 C 1.53778 * 87.08336 * 139.97774 * 16 14 13 18 18 H 1.09000 * 113.61534 * 219.93765 * 17 16 14 19 19 O 1.42897 * 113.61753 * 89.11677 * 17 16 14 20 20 C 1.53783 * 87.08190 * 334.56823 * 17 16 14 21 21 C 1.39183 * 120.05091 * 0.09173 * 10 9 8 22 22 C 1.39235 * 119.39502 * 359.94490 * 21 10 9 23 23 H 0.96700 * 114.00219 * 300.00394 * 1 2 3 24 24 H 1.08996 * 109.47414 * 239.99804 * 2 1 3 25 25 H 1.48499 * 109.99860 * 299.99856 * 3 2 1 26 26 H 1.48502 * 110.00057 * 61.31640 * 3 2 1 27 27 H 1.08003 * 125.01582 * 359.97438 * 5 4 2 28 28 H 0.97002 * 125.01006 * 179.97438 * 6 5 4 29 29 H 1.08002 * 119.88697 * 0.03810 * 8 7 6 30 30 H 1.07998 * 119.67243 * 179.97438 * 9 8 7 31 31 H 0.96991 * 120.00419 * 359.97438 * 13 11 10 32 32 H 1.08999 * 113.61526 * 254.52502 * 16 14 13 33 33 H 1.09003 * 113.61680 * 25.33972 * 16 14 13 34 34 H 0.96692 * 114.00425 * 180.02562 * 19 17 16 35 35 H 1.09002 * 113.61159 * 270.88942 * 20 17 16 36 36 H 1.08989 * 113.61664 * 139.98189 * 20 17 16 37 37 H 1.07997 * 120.30030 * 180.22855 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2306 5 6 2.4600 -0.1386 2.3234 6 7 2.8017 -1.1003 3.2352 7 6 2.4944 -2.3454 2.7419 8 6 2.6334 -3.6349 3.2509 9 6 2.2300 -4.7103 2.5161 10 6 1.6698 -4.5367 1.2428 11 6 1.2377 -5.7121 0.4605 12 8 0.7522 -5.5621 -0.6439 13 7 1.3814 -6.9511 0.9710 14 6 0.9532 -8.1174 0.1946 15 1 0.9303 -7.9265 -0.8783 16 6 1.6881 -9.4138 0.5741 17 6 0.3364 -10.1314 0.4233 18 1 0.1577 -10.8906 1.1848 19 8 0.0837 -10.6039 -0.9014 20 6 -0.3270 -8.7787 0.7318 21 6 1.5219 -3.2574 0.7149 22 6 1.9337 -2.1576 1.4629 23 1 -0.3933 0.4417 0.7650 24 1 1.7924 -0.5138 -0.8899 25 1 1.5615 2.4679 -1.2085 26 1 1.5878 2.4586 1.2242 27 1 2.5957 0.9238 2.4628 28 1 3.2019 -0.9283 4.1019 29 1 3.0620 -3.7833 4.2310 30 1 2.3424 -5.7058 2.9193 31 1 1.7690 -7.0708 1.8520 32 1 2.4318 -9.7249 -0.1595 33 1 2.0733 -9.4149 1.5938 34 1 -0.7651 -11.0558 -1.0026 35 1 -0.4940 -8.6068 1.7952 36 1 -1.2101 -8.5772 0.1256 37 1 1.0874 -3.1188 -0.2641 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_13287722.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:32 Heat of formation + Delta-G solvation = -22.150712 kcal Electronic energy + Delta-G solvation = -22178.513806 eV Core-core repulsion = 18695.875702 eV Total energy + Delta-G solvation = -3482.638104 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.49261 -41.12921 -39.68242 -37.96031 -37.40545 -36.19151 -33.83532 -33.26682 -30.81036 -30.42618 -26.80039 -26.49762 -25.99924 -23.97536 -23.49029 -21.49025 -21.06343 -20.64575 -19.34083 -18.64208 -18.23884 -17.50381 -17.31892 -16.92246 -16.30724 -16.14993 -15.92536 -15.62952 -15.46813 -15.10529 -14.86972 -14.77074 -14.44603 -14.13130 -13.81478 -13.64188 -13.54842 -13.40023 -13.14544 -12.57501 -12.44738 -12.21886 -12.09852 -11.77173 -11.45971 -10.92403 -10.79387 -10.68247 -10.45464 -9.95434 -9.32679 -8.83850 -4.95577 -0.04299 0.18759 1.30501 1.46697 1.55992 1.94605 1.99302 2.02632 2.25117 2.96604 3.01602 3.44279 3.50437 3.58001 3.67831 3.72345 3.78797 3.82309 3.88298 4.06420 4.11088 4.36019 4.41939 4.48236 4.55108 4.57428 4.59692 4.78132 4.81971 4.94334 5.00025 5.02575 5.14432 5.25816 5.38897 5.48981 5.60210 5.61894 5.97974 6.34516 6.53225 6.60587 6.64752 7.37180 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.043 4.043 3 Si 0.687 3.313 4 C -0.187 4.187 5 C 0.058 3.942 6 N -0.585 5.585 7 C 0.118 3.882 8 C -0.134 4.134 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.565 3.435 12 O -0.536 6.536 13 N -0.720 5.720 14 C 0.131 3.869 15 H 0.121 0.879 16 C -0.141 4.141 17 C 0.082 3.918 18 H 0.075 0.925 19 O -0.550 6.550 20 C -0.185 4.185 21 C 0.008 3.992 22 C -0.102 4.102 23 H 0.373 0.627 24 H 0.116 0.884 25 H -0.256 1.256 26 H -0.260 1.260 27 H 0.176 0.824 28 H 0.421 0.579 29 H 0.128 0.872 30 H 0.128 0.872 31 H 0.399 0.601 32 H 0.085 0.915 33 H 0.098 0.902 34 H 0.385 0.615 35 H 0.092 0.908 36 H 0.079 0.921 37 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.597 0.092 7.148 8.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.588 3.412 4 C -0.194 4.194 5 C -0.068 4.068 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.155 4.155 9 C -0.086 4.086 10 C -0.173 4.173 11 C 0.353 3.647 12 O -0.413 6.413 13 N -0.372 5.372 14 C 0.026 3.974 15 H 0.139 0.861 16 C -0.179 4.179 17 C 0.022 3.978 18 H 0.093 0.907 19 O -0.356 6.356 20 C -0.224 4.224 21 C -0.011 4.011 22 C -0.107 4.107 23 H 0.220 0.780 24 H 0.134 0.866 25 H -0.180 1.180 26 H -0.185 1.185 27 H 0.193 0.807 28 H 0.259 0.741 29 H 0.145 0.855 30 H 0.146 0.854 31 H 0.234 0.766 32 H 0.104 0.896 33 H 0.117 0.883 34 H 0.233 0.767 35 H 0.110 0.890 36 H 0.097 0.903 37 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.764 1.058 5.781 6.979 hybrid contribution -1.230 -0.404 1.710 2.144 sum 2.534 0.654 7.491 7.935 Atomic orbital electron populations 1.86644 1.17914 1.79872 1.48962 1.24376 0.83518 1.10084 0.97334 0.95187 0.91405 0.74098 0.80501 1.20701 1.09007 0.91929 0.97811 1.21750 1.01070 0.94440 0.89565 1.41735 1.54680 1.04153 1.18149 1.18436 0.99870 0.86499 0.94222 1.19658 1.05834 0.88852 1.01125 1.20582 0.96710 0.98323 0.93009 1.19569 1.08153 0.93323 0.96289 1.18227 0.77772 0.83007 0.85681 1.90799 1.44262 1.86005 1.20272 1.45903 1.64635 1.05667 1.20981 1.22499 0.94158 0.82815 0.97929 0.86144 1.23462 0.96930 0.94535 1.03015 1.22479 0.96560 0.93851 0.84952 0.90712 1.86473 1.42861 1.77985 1.28301 1.24176 0.99036 0.96864 1.02339 1.20711 0.92357 0.89190 0.98868 1.18919 1.04548 0.92927 0.94294 0.77972 0.86581 1.18004 1.18494 0.80703 0.74137 0.85451 0.85443 0.76553 0.89597 0.88316 0.76728 0.88997 0.90261 0.84319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.24 12.88 -35.23 -0.45 -1.70 16 2 C -0.04 -0.02 3.06 36.01 0.11 0.09 16 3 Si 0.69 -0.93 30.82 -169.99 -5.24 -6.17 16 4 C -0.19 -0.13 5.58 -102.69 -0.57 -0.70 16 5 C 0.06 -0.09 10.43 -16.73 -0.17 -0.27 16 6 N -0.59 1.09 6.05 -10.61 -0.06 1.03 16 7 C 0.12 0.07 7.27 -83.96 -0.61 -0.54 16 8 C -0.13 0.08 10.00 -39.86 -0.40 -0.32 16 9 C -0.07 0.02 9.46 -39.53 -0.37 -0.36 16 10 C -0.17 -0.44 5.87 -104.97 -0.62 -1.06 16 11 C 0.56 2.29 7.76 -12.41 -0.10 2.19 16 12 O -0.54 -4.37 15.93 5.30 0.08 -4.29 16 13 N -0.72 -0.55 5.30 -54.02 -0.29 -0.84 16 14 C 0.13 0.16 4.17 -67.11 -0.28 -0.12 16 15 H 0.12 0.50 7.46 -51.93 -0.39 0.11 16 16 C -0.14 0.11 7.66 -25.92 -0.20 -0.09 16 17 C 0.08 -0.06 5.28 -25.92 -0.14 -0.19 16 18 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 19 O -0.55 -0.44 13.59 -35.23 -0.48 -0.92 16 20 C -0.18 0.02 7.71 -25.92 -0.20 -0.18 16 21 C 0.01 0.03 9.64 -38.86 -0.37 -0.34 16 22 C -0.10 -0.25 6.34 -105.16 -0.67 -0.91 16 23 H 0.37 -0.31 8.70 45.56 0.40 0.08 16 24 H 0.12 0.07 7.96 -51.93 -0.41 -0.34 16 25 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 26 H -0.26 0.09 7.00 56.52 0.40 0.48 16 27 H 0.18 -0.76 6.28 -52.48 -0.33 -1.09 16 28 H 0.42 -2.07 8.96 -40.82 -0.37 -2.43 16 29 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 30 H 0.13 -0.42 6.36 -52.49 -0.33 -0.76 16 31 H 0.40 -0.93 6.73 -40.82 -0.27 -1.20 16 32 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.10 -0.30 8.12 -51.93 -0.42 -0.72 16 34 H 0.38 -1.25 9.12 45.56 0.42 -0.84 16 35 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.08 0.08 8.14 -51.94 -0.42 -0.34 16 37 H 0.14 0.67 7.64 -52.49 -0.40 0.27 16 LS Contribution 316.88 15.07 4.78 4.78 Total: 0.00 -10.56 316.88 -9.69 -20.25 By element: Atomic # 1 Polarization: -5.91 SS G_CDS: -3.43 Total: -9.34 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -4.59 Total: -2.79 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.35 Total: 0.19 kcal Atomic # 8 Polarization: -6.06 SS G_CDS: -0.85 Total: -6.91 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.24 Total: -6.17 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -10.56 -9.69 -20.25 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_13287722.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.905 kcal (2) G-P(sol) polarization free energy of solvation -10.560 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.686 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.151 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds