Wall clock time and date at job start Sat Mar 6 2021 19:38:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34648 * 124.85007 * 2 1 4 4 C 1.36774 * 108.39844 * 180.22971 * 3 2 1 5 5 C 1.47262 * 126.94225 * 179.79324 * 4 3 2 6 6 O 1.21634 * 119.99584 * 179.97438 * 5 4 3 7 7 N 1.34769 * 120.00148 * 359.97313 * 5 4 3 8 8 C 1.46502 * 119.99888 * 180.02562 * 7 5 4 9 9 H 1.08997 * 112.84835 * 336.19072 * 8 7 5 10 10 C 1.53778 * 113.61679 * 107.50167 * 8 7 5 11 11 C 1.53779 * 87.08233 * 89.11631 * 10 8 7 12 12 H 1.09001 * 113.61224 * 270.88333 * 11 10 8 13 13 O 1.42905 * 113.69178 * 139.99479 * 11 10 8 14 14 C 1.53781 * 87.08221 * 25.43046 * 11 10 8 15 15 C 1.46686 * 106.11316 * 359.76997 * 4 3 2 16 16 C 1.34489 * 106.33281 * 359.97438 * 15 4 3 17 17 C 1.50696 * 125.57222 * 179.97438 * 16 15 4 18 18 O 1.42903 * 109.47131 * 150.02404 * 17 16 15 19 19 Si 1.86305 * 109.47185 * 30.02945 * 17 16 15 20 20 H 1.09001 * 109.46801 * 270.17746 * 1 2 3 21 21 H 1.08995 * 109.47253 * 30.17973 * 1 2 3 22 22 H 1.09005 * 109.47180 * 150.17910 * 1 2 3 23 23 H 1.08004 * 125.80417 * 359.97438 * 3 2 1 24 24 H 0.97002 * 120.00108 * 359.97438 * 7 5 4 25 25 H 1.09000 * 113.61758 * 203.66483 * 10 8 7 26 26 H 1.09006 * 113.61524 * 334.56569 * 10 8 7 27 27 H 0.96695 * 113.99831 * 82.46000 * 13 11 10 28 28 H 1.08996 * 113.61524 * 220.01499 * 14 11 10 29 29 H 1.09001 * 113.68709 * 89.12907 * 14 11 10 30 30 H 1.08000 * 126.83784 * 179.97438 * 15 4 3 31 31 H 1.08999 * 109.47358 * 270.02764 * 17 16 15 32 32 H 0.96700 * 114.00311 * 300.00591 * 18 17 16 33 33 H 1.48499 * 109.99670 * 58.67633 * 19 17 16 34 34 H 1.48497 * 110.00233 * 179.97438 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 -0.0052 5 6 4.7283 1.5958 -0.0113 6 8 5.8446 1.1128 -0.0151 7 7 4.5733 2.9345 -0.0128 8 6 5.7494 3.8081 -0.0194 9 1 6.6389 3.3234 0.3829 10 6 5.9853 4.5134 -1.3654 11 6 5.0829 5.6433 -0.8420 12 1 4.0256 5.4951 -1.0620 13 8 5.5431 6.9518 -1.1860 14 6 5.4850 5.2015 0.5750 15 6 3.5375 -0.7492 -0.0029 16 6 2.2447 -1.1198 0.0040 17 6 1.7398 -2.5396 0.0081 18 8 0.4839 -2.5966 0.6876 19 14 2.9689 -3.6333 0.8823 20 1 -0.3633 0.0032 1.0277 21 1 -0.3633 0.8883 -0.5166 22 1 -0.3634 -0.8916 -0.5111 23 1 1.8767 2.1241 -0.0004 24 1 3.6830 3.3197 -0.0102 25 1 7.0197 4.8185 -1.5232 26 1 5.5658 3.9790 -2.2179 27 1 5.2933 7.2351 -2.0761 28 1 4.6618 5.2227 1.2891 29 1 6.3826 5.6941 0.9491 30 1 4.3981 -1.4018 -0.0061 31 1 1.6134 -2.8833 -1.0185 32 1 0.5214 -2.3043 1.6087 33 1 3.1740 -3.1560 2.2734 34 1 2.4823 -5.0362 0.8937 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_13287730.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:36 Heat of formation + Delta-G solvation = -37.817578 kcal Electronic energy + Delta-G solvation = -18592.444116 eV Core-core repulsion = 15493.805068 eV Total energy + Delta-G solvation = -3098.639048 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -42.47380 -41.05466 -39.31117 -37.88040 -36.33513 -34.04872 -33.48376 -31.28370 -27.69228 -26.76642 -26.42321 -25.23019 -23.60804 -21.12236 -20.73487 -20.41391 -19.14937 -18.47700 -17.46079 -17.06121 -16.79785 -16.75882 -16.16649 -15.74347 -15.52673 -15.44262 -15.14434 -14.76682 -14.49472 -14.09218 -13.58886 -13.48625 -13.37996 -13.19338 -13.09150 -12.78137 -12.41589 -12.38397 -12.01256 -11.47973 -11.06059 -10.95284 -10.74323 -10.13743 -9.58230 -9.21830 -4.89873 0.71736 1.03042 1.44624 1.62318 1.80040 2.03203 2.20761 2.52176 3.20729 3.31025 3.47564 3.56486 3.67704 3.83632 3.86914 3.95454 4.04271 4.27348 4.40491 4.45627 4.53029 4.61133 4.74392 4.75212 4.81242 4.91459 4.95527 4.97428 4.98335 5.09785 5.55361 5.65580 5.95735 6.21960 6.34915 6.60751 6.88998 7.31671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.427 5.427 3 C 0.073 3.927 4 C -0.262 4.262 5 C 0.591 3.409 6 O -0.592 6.592 7 N -0.699 5.699 8 C 0.118 3.882 9 H 0.085 0.915 10 C -0.180 4.180 11 C 0.083 3.917 12 H 0.105 0.895 13 O -0.580 6.580 14 C -0.132 4.132 15 C -0.156 4.156 16 C -0.023 4.023 17 C -0.042 4.042 18 O -0.540 6.540 19 Si 0.770 3.230 20 H 0.087 0.913 21 H 0.104 0.896 22 H 0.093 0.907 23 H 0.209 0.791 24 H 0.414 0.586 25 H 0.090 0.910 26 H 0.072 0.928 27 H 0.396 0.604 28 H 0.094 0.906 29 H 0.096 0.904 30 H 0.154 0.846 31 H 0.133 0.867 32 H 0.386 0.614 33 H -0.296 1.296 34 H -0.288 1.288 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.683 2.753 -1.642 7.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.101 5.101 3 C -0.065 4.065 4 C -0.272 4.272 5 C 0.381 3.619 6 O -0.473 6.473 7 N -0.351 5.351 8 C 0.012 3.988 9 H 0.104 0.896 10 C -0.219 4.219 11 C 0.024 3.976 12 H 0.122 0.878 13 O -0.388 6.388 14 C -0.170 4.170 15 C -0.180 4.180 16 C -0.132 4.132 17 C -0.152 4.152 18 O -0.348 6.348 19 Si 0.675 3.325 20 H 0.105 0.895 21 H 0.123 0.877 22 H 0.112 0.888 23 H 0.225 0.775 24 H 0.251 0.749 25 H 0.109 0.891 26 H 0.091 0.909 27 H 0.246 0.754 28 H 0.112 0.888 29 H 0.115 0.885 30 H 0.172 0.828 31 H 0.151 0.849 32 H 0.235 0.765 33 H -0.222 1.222 34 H -0.215 1.215 Dipole moment (debyes) X Y Z Total from point charges -6.106 1.592 -0.956 6.382 hybrid contribution -1.083 0.566 0.169 1.233 sum -7.188 2.158 -0.787 7.547 Atomic orbital electron populations 1.22453 0.74482 1.05972 1.04886 1.43728 1.08082 1.04636 1.53606 1.22409 0.88978 0.93231 1.01858 1.20280 0.92094 0.93932 1.20888 1.17704 0.87901 0.81996 0.74271 1.90759 1.27782 1.76079 1.52669 1.45332 1.09619 1.04697 1.75408 1.21548 0.89604 0.90017 0.97591 0.89638 1.24121 1.02046 0.97993 0.97709 1.23483 0.97400 0.81187 0.95523 0.87761 1.86491 1.80317 1.33000 1.39016 1.23418 1.03867 0.93093 0.96595 1.21823 0.95636 0.93541 1.06956 1.20846 0.90424 0.89795 1.12117 1.24696 0.92668 0.93975 1.03891 1.86559 1.29505 1.88957 1.29763 0.93367 0.84486 0.74701 0.79983 0.89482 0.87713 0.88836 0.77455 0.74898 0.89144 0.90901 0.75431 0.88764 0.88543 0.82836 0.84908 0.76463 1.22249 1.21536 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.57 9.81 127.77 1.25 0.68 16 2 N -0.43 1.49 3.09 -533.23 -1.65 -0.15 16 3 C 0.07 -0.28 10.83 83.92 0.91 0.62 16 4 C -0.26 -0.94 6.29 -19.04 -0.12 -1.06 16 5 C 0.59 4.42 7.81 86.62 0.68 5.10 16 6 O -0.59 -10.14 16.57 -4.14 -0.07 -10.21 16 7 N -0.70 0.17 5.25 -443.46 -2.33 -2.16 16 8 C 0.12 0.18 4.32 45.52 0.20 0.37 16 9 H 0.09 0.59 7.46 -2.39 -0.02 0.58 16 10 C -0.18 0.01 7.71 31.12 0.24 0.25 16 11 C 0.08 -0.26 5.09 31.12 0.16 -0.11 16 12 H 0.10 -0.86 8.14 -2.39 -0.02 -0.88 16 13 O -0.58 0.17 13.67 -148.98 -2.04 -1.87 16 14 C -0.13 0.26 7.66 31.12 0.24 0.49 16 15 C -0.16 -0.63 9.49 23.62 0.22 -0.40 16 16 C -0.02 0.00 6.13 40.98 0.25 0.25 16 17 C -0.04 0.10 2.86 71.23 0.20 0.31 16 18 O -0.54 1.37 10.34 -148.98 -1.54 -0.17 16 19 Si 0.77 -0.62 31.12 68.60 2.13 1.51 16 20 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 21 H 0.10 -1.40 8.13 -2.39 -0.02 -1.41 16 22 H 0.09 -0.68 6.74 -2.38 -0.02 -0.69 16 23 H 0.21 -2.67 7.45 -2.91 -0.02 -2.69 16 24 H 0.41 -3.20 7.64 -92.71 -0.71 -3.91 16 25 H 0.09 0.15 8.14 -2.39 -0.02 0.13 16 26 H 0.07 0.02 8.14 -2.38 -0.02 0.00 16 27 H 0.40 -3.26 9.12 -74.06 -0.68 -3.94 16 28 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 29 H 0.10 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.15 0.53 6.89 -2.91 -0.02 0.51 16 31 H 0.13 -0.58 7.96 -2.39 -0.02 -0.60 16 32 H 0.39 -2.66 8.70 -74.06 -0.64 -3.31 16 33 H -0.30 -1.66 7.11 99.48 0.71 -0.96 16 34 H -0.29 -1.45 7.11 99.48 0.71 -0.74 16 Total: 0.00 -23.84 291.21 -2.10 -25.94 By element: Atomic # 1 Polarization: -18.55 SS G_CDS: -0.84 Total: -19.40 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: 4.23 Total: 6.51 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -3.97 Total: -2.31 kcal Atomic # 8 Polarization: -8.61 SS G_CDS: -3.65 Total: -12.25 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: 2.13 Total: 1.51 kcal Total: -23.84 -2.10 -25.94 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_13287730.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.878 kcal (2) G-P(sol) polarization free energy of solvation -23.841 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.099 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.940 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds