Wall clock time and date at job start Sat Mar 6 2021 19:38:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38980 * 119.95696 * 2 1 4 4 O 1.35709 * 119.90994 * 359.97438 * 3 2 1 5 5 C 1.39010 * 120.17403 * 179.97438 * 3 2 1 6 6 C 1.50706 * 119.95425 * 180.02562 * 5 3 2 7 7 O 1.42899 * 109.46961 * 285.00277 * 6 5 3 8 8 Si 1.86299 * 109.47263 * 164.99977 * 6 5 3 9 9 C 1.37685 * 120.09453 * 359.76551 * 5 3 2 10 10 C 1.39759 * 119.90590 * 0.53116 * 9 5 3 11 11 C 1.47599 * 120.08851 * 179.71759 * 10 9 5 12 12 O 1.21581 * 119.99928 * 359.73091 * 11 10 9 13 13 N 1.34769 * 119.99986 * 179.72509 * 11 10 9 14 14 C 1.46507 * 119.99871 * 180.02562 * 13 11 10 15 15 H 1.08997 * 112.84802 * 336.20386 * 14 13 11 16 16 C 1.54053 * 113.61608 * 107.51032 * 14 13 11 17 17 C 1.53781 * 86.98540 * 139.97785 * 16 14 13 18 18 H 1.09002 * 113.61408 * 219.97782 * 17 16 14 19 19 O 1.42905 * 113.61335 * 89.16138 * 17 16 14 20 20 C 1.53776 * 113.61381 * 205.00131 * 14 13 11 21 21 C 1.37727 * 119.95779 * 180.02562 * 2 1 3 22 22 H 1.08995 * 109.47165 * 269.97905 * 1 2 3 23 23 H 1.09004 * 109.46475 * 29.98232 * 1 2 3 24 24 H 1.09002 * 109.47277 * 149.97571 * 1 2 3 25 25 H 0.96705 * 113.99531 * 90.00123 * 4 3 2 26 26 H 1.09000 * 109.46639 * 44.99631 * 6 5 3 27 27 H 0.96702 * 113.99690 * 299.99245 * 7 6 5 28 28 H 1.48500 * 109.99658 * 58.68163 * 8 6 5 29 29 H 1.48496 * 109.99920 * 180.02562 * 8 6 5 30 30 H 1.07997 * 120.04791 * 180.27779 * 9 5 3 31 31 H 0.96997 * 120.00520 * 0.02562 * 13 11 10 32 32 H 1.08999 * 113.61302 * 25.47177 * 16 14 13 33 33 H 1.08998 * 113.69472 * 254.49143 * 16 14 13 34 34 H 0.96697 * 113.99979 * 80.85878 * 19 17 16 35 35 H 1.09006 * 113.61386 * 105.47347 * 20 14 13 36 36 H 1.09003 * 113.61861 * 334.57120 * 20 14 13 37 37 H 1.08010 * 120.03807 * 0.02692 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3386 2.5180 0.0011 7 8 4.2726 3.1048 -1.3001 8 14 6.1197 2.2156 0.4563 9 6 4.2860 0.0208 0.0059 10 6 3.5919 -1.1922 -0.0003 11 6 4.3328 -2.4688 -0.0009 12 8 5.5486 -2.4660 -0.0008 13 7 3.6616 -3.6375 -0.0013 14 6 4.3970 -4.9046 -0.0013 15 1 5.4045 -4.8092 -0.4062 16 6 4.3390 -5.6517 1.3447 17 6 4.1913 -6.9459 0.5273 18 1 3.4785 -7.6522 0.9530 19 8 5.4391 -7.5538 0.1873 20 6 3.6020 -6.0782 -0.5973 21 6 2.1948 -1.1933 -0.0005 22 1 -0.3633 -0.0004 1.0276 23 1 -0.3632 0.8902 -0.5136 24 1 -0.3634 -0.8898 -0.5142 25 1 1.3220 2.7181 0.8828 26 1 3.8875 3.1937 0.7277 27 1 4.6566 2.5572 -1.9985 28 1 6.7371 1.2707 -0.5087 29 1 6.8675 3.4985 0.4611 30 1 5.3659 0.0258 0.0109 31 1 2.6916 -3.6398 -0.0017 32 1 3.4595 -5.4092 1.9411 33 1 5.2663 -5.5991 1.9152 34 1 5.8263 -8.0818 0.8989 35 1 3.9347 -6.3697 -1.5936 36 1 2.5214 -5.9522 -0.5308 37 1 1.6547 -2.1286 -0.0014 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_13287732.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:38 Heat of formation + Delta-G solvation = -100.204185 kcal Electronic energy + Delta-G solvation = -21876.083685 eV Core-core repulsion = 18393.256929 eV Total energy + Delta-G solvation = -3482.826756 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.78664 -40.91754 -39.61145 -37.91989 -37.50651 -36.30295 -34.22254 -33.88637 -31.64443 -28.12097 -26.99699 -26.89347 -26.03098 -24.03615 -22.13555 -21.54572 -20.93945 -19.65781 -18.85233 -18.44995 -18.08355 -17.33767 -16.85641 -16.58494 -16.39655 -16.02282 -15.79869 -15.64603 -15.36766 -14.81931 -14.61115 -14.46464 -14.09239 -13.90873 -13.71216 -13.57732 -13.31052 -13.27226 -13.05601 -12.80403 -12.41184 -12.31393 -11.74589 -11.65924 -11.55420 -11.06020 -10.81112 -10.55798 -10.13882 -10.02366 -9.68359 -4.94841 -0.40343 0.03337 1.25328 1.62936 1.64880 1.97497 2.05280 2.56207 2.93253 3.01992 3.29263 3.34719 3.48983 3.53550 3.58688 3.66411 3.72928 3.91058 4.02025 4.14606 4.24598 4.40765 4.46190 4.48507 4.50497 4.58059 4.62813 4.69799 4.84155 4.90609 4.96160 4.98770 5.06908 5.09837 5.23930 5.41936 5.51790 6.40632 6.41312 6.53647 6.57908 7.15116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.118 4.118 3 C 0.161 3.839 4 O -0.484 6.484 5 C -0.149 4.149 6 C -0.061 4.061 7 O -0.521 6.521 8 Si 0.680 3.320 9 C -0.053 4.053 10 C -0.139 4.139 11 C 0.561 3.439 12 O -0.531 6.531 13 N -0.718 5.718 14 C 0.129 3.871 15 H 0.122 0.878 16 C -0.184 4.184 17 C 0.082 3.918 18 H 0.076 0.924 19 O -0.550 6.550 20 C -0.141 4.141 21 C -0.066 4.066 22 H 0.074 0.926 23 H 0.077 0.923 24 H 0.070 0.930 25 H 0.394 0.606 26 H 0.117 0.883 27 H 0.375 0.625 28 H -0.255 1.255 29 H -0.253 1.253 30 H 0.145 0.855 31 H 0.400 0.600 32 H 0.092 0.908 33 H 0.080 0.920 34 H 0.385 0.615 35 H 0.086 0.914 36 H 0.099 0.901 37 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.147 -3.173 4.674 7.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.115 3.885 4 O -0.295 6.295 5 C -0.150 4.150 6 C -0.171 4.171 7 O -0.327 6.327 8 Si 0.581 3.419 9 C -0.072 4.072 10 C -0.142 4.142 11 C 0.349 3.651 12 O -0.408 6.408 13 N -0.369 5.369 14 C 0.025 3.975 15 H 0.140 0.860 16 C -0.223 4.223 17 C 0.022 3.978 18 H 0.094 0.906 19 O -0.356 6.356 20 C -0.179 4.179 21 C -0.085 4.085 22 H 0.092 0.908 23 H 0.096 0.904 24 H 0.089 0.911 25 H 0.252 0.748 26 H 0.135 0.865 27 H 0.222 0.778 28 H -0.180 1.180 29 H -0.178 1.178 30 H 0.163 0.837 31 H 0.235 0.765 32 H 0.111 0.889 33 H 0.099 0.901 34 H 0.233 0.767 35 H 0.105 0.895 36 H 0.117 0.883 37 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.796 -2.377 3.575 5.730 hybrid contribution -0.766 -0.328 -0.117 0.841 sum -4.562 -2.705 3.458 6.331 Atomic orbital electron populations 1.20738 0.89704 1.03841 1.02828 1.20216 0.97306 0.92085 1.02227 1.18304 0.88774 0.85268 0.96111 1.84786 1.75604 1.35669 1.33392 1.20600 0.93839 0.95907 1.04619 1.24831 1.10121 0.93485 0.88689 1.86650 1.82666 1.47233 1.16124 0.95003 0.74476 0.81163 0.91306 1.21159 1.00883 0.90229 0.94896 1.19825 0.93465 0.93432 1.07468 1.18190 0.87288 0.83671 0.75959 1.90815 1.13340 1.87494 1.49145 1.45922 1.10107 1.05486 1.75375 1.22608 0.97800 0.80566 0.96572 0.86036 1.24223 1.03643 0.96829 0.97652 1.22477 0.86520 0.92672 0.96148 0.90645 1.86476 1.36346 1.69308 1.43505 1.23461 1.00168 0.94320 0.99989 1.21099 0.92574 0.97807 0.96977 0.90785 0.90385 0.91090 0.74813 0.86538 0.77751 1.17977 1.17758 0.83735 0.76452 0.88913 0.90138 0.76665 0.89533 0.88264 0.85068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.28 9.79 36.01 0.35 0.63 16 2 C -0.12 0.08 5.89 -104.53 -0.62 -0.53 16 3 C 0.16 0.05 6.66 -39.02 -0.26 -0.21 16 4 O -0.48 0.08 11.84 -18.83 -0.22 -0.14 16 5 C -0.15 -0.10 5.27 -104.53 -0.55 -0.65 16 6 C -0.06 -0.03 2.37 36.01 0.09 0.06 16 7 O -0.52 -1.27 12.88 -35.23 -0.45 -1.72 16 8 Si 0.68 0.20 30.23 -169.99 -5.14 -4.94 16 9 C -0.05 -0.08 8.20 -39.21 -0.32 -0.40 16 10 C -0.14 -0.14 5.87 -104.96 -0.62 -0.76 16 11 C 0.56 1.39 7.76 -12.44 -0.10 1.29 16 12 O -0.53 -3.38 15.94 5.29 0.08 -3.30 16 13 N -0.72 0.37 5.31 -53.90 -0.29 0.08 16 14 C 0.13 0.01 4.18 -66.97 -0.28 -0.27 16 15 H 0.12 0.35 7.46 -51.93 -0.39 -0.03 16 16 C -0.18 0.25 7.73 -25.78 -0.20 0.05 16 17 C 0.08 -0.13 5.27 -25.92 -0.14 -0.27 16 18 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 19 O -0.55 0.00 13.59 -35.23 -0.48 -0.48 16 20 C -0.14 0.23 7.66 -25.92 -0.20 0.03 16 21 C -0.07 0.08 9.18 -39.22 -0.36 -0.28 16 22 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 23 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 24 H 0.07 -0.23 8.08 -51.93 -0.42 -0.65 16 25 H 0.39 -1.86 9.06 45.56 0.41 -1.44 16 26 H 0.12 -0.11 7.82 -51.93 -0.41 -0.52 16 27 H 0.38 -0.04 8.70 45.56 0.40 0.36 16 28 H -0.26 -0.75 6.69 56.52 0.38 -0.37 16 29 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 30 H 0.15 0.30 4.43 -52.49 -0.23 0.06 16 31 H 0.40 -1.39 6.75 -40.82 -0.28 -1.67 16 32 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.39 -1.55 9.12 45.56 0.42 -1.13 16 35 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.10 -0.38 8.12 -51.93 -0.42 -0.80 16 37 H 0.13 -0.53 6.40 -52.48 -0.34 -0.87 16 LS Contribution 313.59 15.07 4.73 4.73 Total: 0.00 -10.01 313.59 -7.95 -17.95 By element: Atomic # 1 Polarization: -7.90 SS G_CDS: -2.98 Total: -10.88 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -3.20 Total: -1.30 kcal Atomic # 7 Polarization: 0.37 SS G_CDS: -0.29 Total: 0.08 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -1.07 Total: -5.64 kcal Atomic # 14 Polarization: 0.20 SS G_CDS: -5.14 Total: -4.94 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -10.01 -7.95 -17.95 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_13287732.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.252 kcal (2) G-P(sol) polarization free energy of solvation -10.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.947 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds