Wall clock time and date at job start Sat Mar 6 2021 19:38:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86302 * 109.46944 * 2 1 4 4 C 1.50697 * 109.46725 * 119.99800 * 2 1 3 5 5 C 1.38505 * 119.80415 * 245.02164 * 4 2 1 6 6 C 1.37834 * 120.30105 * 179.76716 * 5 4 2 7 7 C 1.39663 * 119.90600 * 0.46811 * 6 5 4 8 8 C 1.47545 * 120.19259 * 179.78651 * 7 6 5 9 9 O 1.21586 * 119.99989 * 179.72116 * 8 7 6 10 10 N 1.34780 * 119.99604 * 359.72743 * 8 7 6 11 11 C 1.46497 * 119.99653 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.84935 * 334.66222 * 11 10 8 13 13 C 1.53786 * 113.61643 * 105.85894 * 11 10 8 14 14 C 1.53962 * 87.01719 * 89.22773 * 13 11 10 15 15 H 1.08997 * 113.53543 * 270.80998 * 14 13 11 16 16 O 1.42901 * 113.74003 * 139.94384 * 14 13 11 17 17 C 1.53781 * 113.61305 * 203.46742 * 11 10 8 18 18 C 1.40175 * 119.61822 * 359.51411 * 7 6 5 19 19 O 1.35657 * 120.15367 * 180.27628 * 18 7 6 20 20 C 1.38091 * 119.80705 * 65.00251 * 4 2 1 21 21 H 0.96705 * 113.99781 * 60.00079 * 1 2 3 22 22 H 1.08996 * 109.47003 * 239.99658 * 2 1 3 23 23 H 1.48494 * 110.00243 * 59.99732 * 3 2 1 24 24 H 1.48505 * 109.99694 * 181.32057 * 3 2 1 25 25 H 1.08002 * 119.84981 * 359.97438 * 5 4 2 26 26 H 1.08000 * 120.04637 * 180.22942 * 6 5 4 27 27 H 0.96995 * 120.00200 * 359.97438 * 10 8 7 28 28 H 1.08993 * 113.61491 * 203.74894 * 13 11 10 29 29 H 1.09000 * 113.61138 * 334.65232 * 13 11 10 30 30 H 0.96707 * 113.99376 * 82.40557 * 16 14 13 31 31 H 1.09001 * 113.61695 * 25.34675 * 17 11 10 32 32 H 1.08997 * 113.61223 * 156.25258 * 17 11 10 33 33 H 0.96700 * 113.99943 * 89.99365 * 19 18 7 34 34 H 1.08001 * 119.95814 * 0.02562 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6392 -0.0068 2.1908 6 6 3.0992 -0.6453 3.3225 7 6 2.8594 -2.0099 3.4982 8 6 3.3530 -2.7006 4.7049 9 8 3.1379 -3.8877 4.8567 10 7 4.0422 -2.0157 5.6390 11 6 4.5317 -2.7014 6.8374 12 1 3.9449 -3.5849 7.0890 13 6 6.0490 -2.9521 6.8273 14 6 6.2002 -1.5719 7.4928 15 1 6.2935 -0.7528 6.7798 16 8 7.1966 -1.5329 8.5164 17 6 4.7718 -1.7611 8.0303 18 6 2.1422 -2.7183 2.5242 19 8 1.8982 -4.0428 2.6865 20 6 1.6826 -2.0588 1.3942 21 1 -0.3933 0.4417 -0.7651 22 1 1.7924 -0.5139 -0.8899 23 1 1.5615 2.4679 1.2084 24 1 3.5346 1.7703 -0.0322 25 1 2.8288 1.0476 2.0539 26 1 3.6475 -0.0919 4.0704 27 1 4.2140 -1.0688 5.5177 28 1 6.3590 -3.7803 7.4644 29 1 6.4762 -3.0041 5.8258 30 1 8.0970 -1.4140 8.1843 31 1 4.1696 -0.8532 7.9987 32 1 4.7321 -2.2633 8.9969 33 1 1.0727 -4.2367 3.1512 34 1 1.1300 -2.6007 0.6409 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_13422076.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:38:50 Heat of formation + Delta-G solvation = -92.229246 kcal Electronic energy + Delta-G solvation = -19977.942909 eV Core-core repulsion = 16650.999591 eV Total energy + Delta-G solvation = -3326.943318 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.103 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.80294 -40.73670 -39.27338 -38.33538 -37.26823 -36.38410 -34.14382 -32.50634 -31.19607 -27.73391 -26.88552 -25.41167 -23.97699 -23.43920 -21.81474 -20.64908 -19.38101 -18.89279 -18.57783 -18.42670 -17.59704 -16.79416 -16.61807 -16.34698 -16.23376 -15.67377 -15.63644 -15.36290 -15.05497 -14.59263 -14.21544 -14.05892 -13.66370 -13.47821 -13.38808 -12.98498 -12.86113 -12.54645 -12.48597 -12.15683 -11.80329 -11.60534 -10.87196 -10.83606 -10.53191 -10.22153 -10.08409 -9.84897 -5.10227 -0.47144 0.03441 1.10978 1.49800 1.69613 1.81293 1.93474 2.48278 3.05643 3.12004 3.16195 3.32939 3.46771 3.54069 3.59395 3.64170 3.74411 3.83864 3.95618 4.12377 4.15583 4.45531 4.50630 4.62339 4.64499 4.69711 4.81246 4.84587 4.86880 4.94534 5.06015 5.13935 5.43972 5.46320 6.35344 6.45545 6.58958 6.66568 7.14565 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.079 4.079 3 Si 0.688 3.312 4 C -0.030 4.030 5 C -0.142 4.142 6 C -0.063 4.063 7 C -0.166 4.166 8 C 0.563 3.437 9 O -0.513 6.513 10 N -0.714 5.714 11 C 0.122 3.878 12 H 0.112 0.888 13 C -0.181 4.181 14 C 0.075 3.925 15 H 0.079 0.921 16 O -0.558 6.558 17 C -0.135 4.135 18 C 0.176 3.824 19 O -0.475 6.475 20 C -0.125 4.125 21 H 0.386 0.614 22 H 0.080 0.920 23 H -0.249 1.249 24 H -0.253 1.253 25 H 0.128 0.872 26 H 0.133 0.867 27 H 0.399 0.601 28 H 0.101 0.899 29 H 0.074 0.926 30 H 0.381 0.619 31 H 0.080 0.920 32 H 0.107 0.893 33 H 0.399 0.601 34 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.331 5.661 -3.601 6.717 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.189 4.189 3 Si 0.588 3.412 4 C -0.030 4.030 5 C -0.160 4.160 6 C -0.082 4.082 7 C -0.169 4.169 8 C 0.350 3.650 9 O -0.388 6.388 10 N -0.367 5.367 11 C 0.017 3.983 12 H 0.130 0.870 13 C -0.220 4.220 14 C 0.016 3.984 15 H 0.097 0.903 16 O -0.364 6.364 17 C -0.173 4.173 18 C 0.130 3.870 19 O -0.287 6.287 20 C -0.144 4.144 21 H 0.234 0.766 22 H 0.098 0.902 23 H -0.173 1.173 24 H -0.178 1.178 25 H 0.145 0.855 26 H 0.151 0.849 27 H 0.234 0.766 28 H 0.120 0.880 29 H 0.093 0.907 30 H 0.228 0.772 31 H 0.099 0.901 32 H 0.125 0.875 33 H 0.258 0.742 34 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 0.081 4.899 -2.403 5.458 hybrid contribution 0.275 0.093 -0.094 0.305 sum 0.356 4.992 -2.497 5.594 Atomic orbital electron populations 1.86487 1.16741 1.81938 1.49885 1.24784 0.86143 1.10804 0.97203 0.95057 0.80854 0.77742 0.87512 1.19427 0.95680 0.93496 0.94412 1.20827 1.01014 0.99521 0.94618 1.21077 0.97420 0.92668 0.97029 1.20377 1.05857 0.94223 0.96473 1.18009 0.77934 0.86651 0.82357 1.90840 1.56309 1.14426 1.77233 1.45621 1.57006 1.12985 1.21060 1.21639 0.95252 0.96968 0.84449 0.87002 1.24193 0.96435 0.99232 1.02106 1.23468 0.88984 0.96077 0.89870 0.90301 1.86533 1.19123 1.95976 1.34724 1.23455 0.94410 1.00371 0.99029 1.18473 0.93479 0.83516 0.91579 1.84751 1.46277 1.17786 1.79848 1.21339 1.00619 0.93791 0.98647 0.76638 0.90202 1.17319 1.17757 0.85493 0.84918 0.76579 0.88047 0.90746 0.77178 0.90143 0.87468 0.74173 0.83935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.54 12.81 -35.23 -0.45 0.09 16 2 C -0.08 0.10 2.78 36.00 0.10 0.20 16 3 Si 0.69 -1.64 29.83 -169.99 -5.07 -6.71 16 4 C -0.03 -0.03 5.39 -104.58 -0.56 -0.60 16 5 C -0.14 -0.10 8.64 -39.63 -0.34 -0.44 16 6 C -0.06 -0.01 9.54 -39.20 -0.37 -0.38 16 7 C -0.17 -0.37 5.89 -104.84 -0.62 -0.98 16 8 C 0.56 1.80 7.76 -12.46 -0.10 1.70 16 9 O -0.51 -3.43 14.78 -16.58 -0.25 -3.67 16 10 N -0.71 -0.10 5.22 -54.05 -0.28 -0.39 16 11 C 0.12 0.04 4.29 -67.12 -0.29 -0.24 16 12 H 0.11 0.21 7.50 -51.93 -0.39 -0.18 16 13 C -0.18 0.00 7.73 -25.82 -0.20 -0.20 16 14 C 0.08 -0.06 5.10 -25.82 -0.13 -0.20 16 15 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 16 O -0.56 -0.24 13.68 -35.23 -0.48 -0.72 16 17 C -0.13 0.11 7.65 -25.92 -0.20 -0.09 16 18 C 0.18 0.50 6.72 -38.69 -0.26 0.24 16 19 O -0.48 -1.58 11.58 -40.54 -0.47 -2.05 16 20 C -0.13 -0.22 9.60 -39.47 -0.38 -0.60 16 21 H 0.39 -2.30 8.74 45.56 0.40 -1.91 16 22 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 23 H -0.25 -0.12 7.04 56.52 0.40 0.28 16 24 H -0.25 0.00 7.11 56.52 0.40 0.40 16 25 H 0.13 -0.04 4.83 -52.49 -0.25 -0.29 16 26 H 0.13 -0.41 6.40 -52.49 -0.34 -0.74 16 27 H 0.40 -0.99 6.74 -40.82 -0.27 -1.27 16 28 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 30 H 0.38 -1.30 9.12 45.56 0.42 -0.89 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.11 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.40 -0.15 9.06 45.56 0.41 0.26 16 34 H 0.14 0.11 8.06 -52.49 -0.42 -0.31 16 LS Contribution 292.26 15.07 4.40 4.40 Total: 0.00 -10.21 292.26 -8.12 -18.34 By element: Atomic # 1 Polarization: -5.52 SS G_CDS: -2.18 Total: -7.70 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: -3.35 Total: -1.60 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.28 Total: -0.39 kcal Atomic # 8 Polarization: -4.70 SS G_CDS: -1.65 Total: -6.35 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.07 Total: -6.71 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -10.21 -8.12 -18.34 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_13422076.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.893 kcal (2) G-P(sol) polarization free energy of solvation -10.212 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds