Wall clock time and date at job start Sat Mar 6 2021 19:39:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86300 * 109.46867 * 2 1 4 4 C 1.50703 * 109.47264 * 119.99846 * 2 1 3 5 5 C 1.34171 * 125.43566 * 64.72053 * 4 2 1 6 6 C 1.47021 * 105.95500 * 179.86921 * 5 4 2 7 7 C 1.47373 * 127.19927 * 180.15180 * 6 5 4 8 8 O 1.21623 * 119.99641 * 0.25671 * 7 6 5 9 9 N 1.34777 * 120.00537 * 180.26174 * 7 6 5 10 10 C 1.46501 * 120.00073 * 179.97438 * 9 7 6 11 11 H 1.09003 * 112.84673 * 334.67086 * 10 9 7 12 12 C 1.53779 * 113.61291 * 105.86199 * 10 9 7 13 13 C 1.54053 * 86.98510 * 89.16103 * 12 10 9 14 14 H 1.09001 * 113.68895 * 270.87750 * 13 12 10 15 15 O 1.42900 * 113.61929 * 139.97547 * 13 12 10 16 16 C 1.53777 * 113.61405 * 203.47079 * 10 9 7 17 17 C 1.36420 * 105.61091 * 0.38352 * 6 5 4 18 18 O 1.33656 * 108.39754 * 359.77065 * 17 6 5 19 19 H 0.96691 * 114.00079 * 59.99872 * 1 2 3 20 20 H 1.09001 * 109.47103 * 240.00307 * 2 1 3 21 21 H 1.48504 * 110.00174 * 298.67905 * 3 2 1 22 22 H 1.48492 * 110.00227 * 59.99933 * 3 2 1 23 23 H 1.08000 * 127.02489 * 359.97438 * 5 4 2 24 24 H 0.96994 * 119.99431 * 359.97438 * 9 7 6 25 25 H 1.08995 * 113.61969 * 203.66534 * 12 10 9 26 26 H 1.09000 * 113.61789 * 334.57074 * 12 10 9 27 27 H 0.96708 * 113.99958 * 82.51148 * 15 13 12 28 28 H 1.09001 * 113.61664 * 25.43141 * 16 10 9 29 29 H 1.08998 * 113.61364 * 156.25651 * 16 10 9 30 30 H 1.08000 * 125.80199 * 179.79836 * 17 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7506 -2.0109 1.5062 6 6 2.4128 -2.2462 2.7976 7 6 2.5011 -3.5192 3.5348 8 8 1.9938 -4.5245 3.0752 9 7 3.1438 -3.5694 4.7184 10 6 3.2310 -4.8348 5.4515 11 1 2.4203 -5.5216 5.2082 12 6 4.6245 -5.4830 5.3978 13 6 4.9633 -4.6671 6.6598 14 1 5.3722 -3.6795 6.4461 15 8 5.7350 -5.3915 7.6199 16 6 3.4555 -4.6572 6.9624 17 6 2.9240 -1.0385 3.1734 18 8 2.6261 -0.1417 2.2281 19 1 -0.3933 0.4417 -0.7650 20 1 1.7924 -0.5138 -0.8900 21 1 1.5879 2.4586 -1.2243 22 1 1.5615 2.4679 1.2084 23 1 1.2272 -2.7372 0.9020 24 1 3.5486 -2.7677 5.0848 25 1 4.6118 -6.5601 5.5646 26 1 5.2061 -5.1962 4.5216 27 1 6.6842 -5.4013 7.4350 28 1 3.0940 -3.7042 7.3485 29 1 3.1225 -5.5083 7.5563 30 1 3.4760 -0.8407 4.0803 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_13456056.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:02 Heat of formation + Delta-G solvation = -61.678934 kcal Electronic energy + Delta-G solvation = -16772.679189 eV Core-core repulsion = 13730.824392 eV Total energy + Delta-G solvation = -3041.854798 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 240.088 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -43.72530 -41.21731 -39.39541 -38.12514 -36.40934 -34.31506 -33.47640 -31.80191 -26.87830 -26.87651 -25.93089 -24.30025 -22.22233 -21.10129 -20.63577 -19.05002 -18.81557 -18.62168 -17.33067 -17.13600 -16.96860 -16.38006 -16.03990 -15.86189 -15.70857 -15.17520 -14.71440 -14.12974 -14.06093 -13.77558 -13.59599 -13.47468 -12.90862 -12.78880 -12.48897 -12.12105 -11.61662 -11.07719 -10.89535 -10.85554 -10.70910 -10.16710 -9.80815 -5.04994 0.20757 0.86045 1.08351 1.37411 1.67234 1.89533 1.95112 2.31251 3.12669 3.17070 3.34302 3.44516 3.52488 3.56190 3.72829 3.82250 3.86515 4.13485 4.34509 4.49402 4.58556 4.65387 4.70961 4.78372 4.82281 4.86121 4.96700 5.21794 5.45684 5.84706 6.23667 6.37404 6.59898 7.16527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.039 4.039 3 Si 0.701 3.299 4 C -0.010 4.010 5 C -0.120 4.120 6 C -0.238 4.238 7 C 0.592 3.408 8 O -0.527 6.527 9 N -0.713 5.713 10 C 0.122 3.878 11 H 0.112 0.888 12 C -0.180 4.180 13 C 0.075 3.925 14 H 0.080 0.920 15 O -0.558 6.558 16 C -0.135 4.135 17 C 0.034 3.966 18 O -0.165 6.165 19 H 0.389 0.611 20 H 0.098 0.902 21 H -0.252 1.252 22 H -0.251 1.251 23 H 0.162 0.838 24 H 0.398 0.602 25 H 0.101 0.899 26 H 0.074 0.926 27 H 0.381 0.619 28 H 0.080 0.920 29 H 0.107 0.893 30 H 0.215 0.785 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.658 3.771 -0.563 6.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.148 4.148 3 Si 0.600 3.400 4 C -0.058 4.058 5 C -0.140 4.140 6 C -0.242 4.242 7 C 0.380 3.620 8 O -0.403 6.403 9 N -0.365 5.365 10 C 0.017 3.983 11 H 0.130 0.870 12 C -0.219 4.219 13 C 0.016 3.984 14 H 0.098 0.902 15 O -0.364 6.364 16 C -0.173 4.173 17 C -0.037 4.037 18 O -0.061 6.061 19 H 0.238 0.762 20 H 0.116 0.884 21 H -0.177 1.177 22 H -0.175 1.175 23 H 0.180 0.820 24 H 0.233 0.767 25 H 0.119 0.881 26 H 0.093 0.907 27 H 0.228 0.772 28 H 0.099 0.901 29 H 0.125 0.875 30 H 0.231 0.769 Dipole moment (debyes) X Y Z Total from point charges 3.624 3.777 -0.102 5.236 hybrid contribution -0.337 0.092 -0.474 0.588 sum 3.288 3.869 -0.576 5.110 Atomic orbital electron populations 1.86574 1.16843 1.80424 1.50346 1.23847 0.84987 1.12313 0.93609 0.94517 0.91305 0.73193 0.81004 1.21075 1.01062 0.92044 0.91602 1.22492 1.00683 0.95496 0.95341 1.21462 1.09215 0.94224 0.99312 1.17248 0.77516 0.87134 0.80114 1.90828 1.46319 1.35710 1.67489 1.45518 1.57723 1.11788 1.21443 1.21643 0.98980 0.86219 0.91479 0.87015 1.24208 0.97132 1.01719 0.98879 1.23496 0.91877 0.94407 0.88592 0.90173 1.86536 1.22938 1.75811 1.51125 1.23455 0.94111 1.04297 0.95428 1.24446 0.99662 0.86648 0.92902 1.83665 1.57393 1.38798 1.26205 0.76180 0.88395 1.17678 1.17530 0.82023 0.76729 0.88078 0.90681 0.77172 0.90105 0.87506 0.76886 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.28 12.86 -35.23 -0.45 -0.73 16 2 C -0.04 0.03 2.96 36.01 0.11 0.13 16 3 Si 0.70 -1.09 32.09 -169.99 -5.46 -6.54 16 4 C -0.01 -0.01 6.22 -35.74 -0.22 -0.23 16 5 C -0.12 -0.31 10.90 -37.46 -0.41 -0.71 16 6 C -0.24 -0.36 6.31 -103.28 -0.65 -1.01 16 7 C 0.59 1.63 7.81 -12.54 -0.10 1.53 16 8 O -0.53 -3.73 16.60 5.26 0.09 -3.65 16 9 N -0.71 0.57 5.25 -54.11 -0.28 0.28 16 10 C 0.12 -0.03 4.30 -67.12 -0.29 -0.32 16 11 H 0.11 0.19 7.50 -51.93 -0.39 -0.20 16 12 C -0.18 0.14 7.73 -25.78 -0.20 -0.06 16 13 C 0.08 -0.12 5.10 -25.77 -0.13 -0.25 16 14 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 15 O -0.56 0.08 13.67 -35.23 -0.48 -0.40 16 16 C -0.13 0.18 7.65 -25.92 -0.20 -0.02 16 17 C 0.03 -0.05 11.61 30.08 0.35 0.30 16 18 O -0.16 -0.05 8.90 7.67 0.07 0.01 16 19 H 0.39 -1.54 8.74 45.56 0.40 -1.14 16 20 H 0.10 -0.30 7.96 -51.93 -0.41 -0.71 16 21 H -0.25 0.05 7.11 56.52 0.40 0.45 16 22 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 23 H 0.16 0.44 8.06 -52.49 -0.42 0.02 16 24 H 0.40 -1.64 7.67 -40.82 -0.31 -1.96 16 25 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.38 -1.53 9.12 45.56 0.42 -1.12 16 28 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.11 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.21 -1.37 7.47 -52.49 -0.39 -1.76 16 LS Contribution 271.42 15.07 4.09 4.09 Total: 0.00 -10.29 271.42 -6.60 -16.89 By element: Atomic # 1 Polarization: -6.89 SS G_CDS: -2.43 Total: -9.32 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -1.74 Total: -0.64 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.28 Total: 0.28 kcal Atomic # 8 Polarization: -3.99 SS G_CDS: -0.78 Total: -4.77 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.46 Total: -6.54 kcal Total LS contribution 4.09 Total: 4.09 kcal Total: -10.29 -6.60 -16.89 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_13456056.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.788 kcal (2) G-P(sol) polarization free energy of solvation -10.292 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.080 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.599 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.891 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds