Wall clock time and date at job start Sat Mar 6 2021 19:39:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47264 * 2 1 4 4 C 1.50696 * 109.46923 * 240.00065 * 2 1 3 5 5 C 1.34854 * 125.89121 * 120.32651 * 4 2 1 6 6 C 1.40890 * 107.41722 * 180.15763 * 5 4 2 7 7 C 1.34856 * 107.41764 * 359.55980 * 6 5 4 8 8 C 1.50694 * 125.88896 * 180.23979 * 7 6 5 9 9 C 1.50704 * 109.46972 * 85.03378 * 8 7 6 10 10 O 1.21285 * 119.99804 * 359.97438 * 9 8 7 11 11 N 1.34777 * 120.00261 * 179.97438 * 9 8 7 12 12 C 1.46501 * 119.99931 * 179.97438 * 11 9 8 13 13 H 1.08999 * 112.84874 * 25.33413 * 12 11 9 14 14 C 1.53783 * 113.61219 * 156.53122 * 12 11 9 15 15 C 1.53780 * 87.08091 * 139.97939 * 14 12 11 16 16 H 1.08999 * 113.61206 * 220.01733 * 15 14 12 17 17 O 1.42901 * 113.61368 * 89.19699 * 15 14 12 18 18 C 1.53784 * 113.61329 * 254.13685 * 12 11 9 19 19 N 1.36337 * 108.21648 * 0.27154 * 7 6 5 20 20 H 0.96697 * 114.00097 * 59.99777 * 1 2 3 21 21 H 1.08996 * 109.46968 * 120.00121 * 2 1 3 22 22 H 1.48498 * 110.00104 * 298.68426 * 3 2 1 23 23 H 1.48504 * 109.99697 * 59.99939 * 3 2 1 24 24 H 1.07999 * 126.28920 * 0.02562 * 5 4 2 25 25 H 1.08002 * 126.29400 * 179.83402 * 6 5 4 26 26 H 1.09001 * 109.46944 * 205.02501 * 8 7 6 27 27 H 1.08993 * 109.48079 * 325.03338 * 8 7 6 28 28 H 0.96996 * 119.99936 * 0.02562 * 11 9 8 29 29 H 1.08999 * 113.61203 * 254.52571 * 14 12 11 30 30 H 1.09005 * 113.61543 * 25.42872 * 14 12 11 31 31 H 0.96698 * 113.99992 * 179.97438 * 17 15 14 32 32 H 1.09004 * 113.61438 * 334.56751 * 18 12 11 33 33 H 1.08999 * 113.61288 * 105.47325 * 18 12 11 34 34 H 0.97000 * 125.63784 * 180.02562 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7149 -0.1745 -2.1882 6 6 2.9447 -1.1746 -3.1536 7 6 2.3009 -2.2865 -2.7440 8 6 2.2749 -3.6089 -3.4662 9 6 3.4933 -4.4115 -3.0886 10 8 4.3031 -3.9544 -2.3100 11 7 3.6829 -5.6372 -3.6160 12 6 4.8676 -6.4171 -3.2492 13 1 5.2698 -6.1427 -2.2741 14 6 4.6898 -7.9330 -3.4379 15 6 6.1326 -7.9566 -3.9694 16 1 6.2725 -8.6192 -4.8235 17 8 7.1151 -8.1506 -2.9499 18 6 5.9309 -6.4808 -4.3585 19 7 1.6770 -2.0077 -1.5643 20 1 -0.3933 0.4417 -0.7650 21 1 1.7923 -0.5138 0.8899 22 1 1.5879 2.4586 -1.2242 23 1 1.5615 2.4678 1.2085 24 1 3.0945 0.8363 -2.2121 25 1 3.5325 -1.0713 -4.0537 26 1 1.3765 -4.1586 -3.1855 27 1 2.2734 -3.4354 -4.5423 28 1 3.0354 -6.0026 -4.2389 29 1 4.5601 -8.4771 -2.5024 30 1 3.9437 -8.1951 -4.1881 31 1 8.0245 -8.1668 -3.2781 32 1 5.5248 -6.3452 -5.3609 33 1 6.8016 -5.8543 -4.1650 34 1 1.1412 -2.6295 -1.0475 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_14644196.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:06 Heat of formation + Delta-G solvation = -42.352293 kcal Electronic energy + Delta-G solvation = -18292.837879 eV Core-core repulsion = 15194.002190 eV Total energy + Delta-G solvation = -3098.835688 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -42.27405 -41.09458 -39.55286 -37.76777 -36.25267 -34.00607 -32.84546 -31.83218 -29.41843 -26.88088 -25.87710 -24.62047 -21.88460 -21.28070 -21.19239 -20.75640 -19.00105 -18.51321 -18.09120 -17.32271 -16.72230 -16.45394 -16.31329 -15.96783 -15.33878 -15.13968 -14.58652 -14.52457 -14.14656 -14.05699 -13.81679 -13.71164 -13.60269 -13.50710 -13.10590 -12.79010 -12.29148 -12.10426 -11.73135 -11.54331 -10.99025 -10.79138 -10.71343 -10.03865 -9.69279 -8.87973 -4.84041 1.17146 1.31569 1.64295 1.72108 1.96640 1.97451 2.31521 2.54361 2.94113 3.36000 3.38855 3.60076 3.64260 3.72596 3.85778 3.95478 4.01966 4.03874 4.35780 4.46567 4.49883 4.51343 4.61905 4.70163 4.84624 4.86492 4.92370 5.07649 5.34265 5.37739 5.48708 6.06424 6.22033 6.41123 6.45139 6.58535 6.68698 7.24386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.056 4.056 3 Si 0.716 3.284 4 C -0.009 4.009 5 C -0.186 4.186 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.073 4.073 9 C 0.511 3.489 10 O -0.521 6.521 11 N -0.725 5.725 12 C 0.130 3.870 13 H 0.118 0.882 14 C -0.141 4.141 15 C 0.081 3.919 16 H 0.075 0.925 17 O -0.551 6.551 18 C -0.184 4.184 19 N -0.536 5.536 20 H 0.378 0.622 21 H 0.115 0.885 22 H -0.257 1.257 23 H -0.258 1.258 24 H 0.142 0.858 25 H 0.136 0.864 26 H 0.099 0.901 27 H 0.117 0.883 28 H 0.400 0.600 29 H 0.084 0.916 30 H 0.099 0.901 31 H 0.385 0.615 32 H 0.092 0.908 33 H 0.079 0.921 34 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.154 -2.951 -4.795 5.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.166 4.166 3 Si 0.615 3.385 4 C -0.122 4.122 5 C -0.211 4.211 6 C -0.198 4.198 7 C -0.078 4.078 8 C -0.113 4.113 9 C 0.297 3.703 10 O -0.395 6.395 11 N -0.377 5.377 12 C 0.026 3.974 13 H 0.136 0.864 14 C -0.179 4.179 15 C 0.021 3.979 16 H 0.093 0.907 17 O -0.357 6.357 18 C -0.223 4.223 19 N -0.130 5.130 20 H 0.225 0.775 21 H 0.133 0.867 22 H -0.181 1.181 23 H -0.183 1.183 24 H 0.159 0.841 25 H 0.154 0.846 26 H 0.117 0.883 27 H 0.135 0.865 28 H 0.235 0.765 29 H 0.103 0.897 30 H 0.117 0.883 31 H 0.233 0.767 32 H 0.110 0.890 33 H 0.097 0.903 34 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -0.315 -2.185 -3.188 3.878 hybrid contribution -1.099 -0.834 -1.092 1.760 sum -1.414 -3.020 -4.280 5.426 Atomic orbital electron populations 1.86575 1.18044 1.80213 1.49548 1.24792 0.83622 1.11569 0.96585 0.94206 0.91643 0.72432 0.80198 1.20774 1.05953 0.85545 0.99945 1.20647 1.04233 1.00226 0.95995 1.20585 1.04814 0.92632 1.01760 1.19483 1.02911 0.95739 0.89619 1.20141 0.97312 0.91820 1.02047 1.20640 0.87531 0.81470 0.80697 1.90774 1.45437 1.69356 1.33921 1.46030 1.25851 1.17518 1.48316 1.22483 0.85400 0.89845 0.99711 0.86408 1.23456 0.95472 0.95865 1.03137 1.22519 0.89517 0.95265 0.90584 0.90678 1.86472 1.18837 1.95293 1.35068 1.24194 1.00523 0.97863 0.99757 1.41785 1.41305 1.10916 1.19020 0.77456 0.86735 1.18092 1.18281 0.84079 0.84594 0.88263 0.86520 0.76512 0.89683 0.88267 0.76665 0.88966 0.90258 0.75107 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.91 12.88 -35.23 -0.45 -1.36 16 2 C -0.06 -0.05 3.08 36.00 0.11 0.06 16 3 Si 0.72 -0.08 30.58 -169.99 -5.20 -5.28 16 4 C -0.01 -0.02 6.51 -81.79 -0.53 -0.55 16 5 C -0.19 -0.43 9.37 -39.78 -0.37 -0.80 16 6 C -0.17 -0.45 10.76 -39.78 -0.43 -0.88 16 7 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 8 C -0.07 0.11 6.24 -29.04 -0.18 -0.08 16 9 C 0.51 0.62 7.82 -10.98 -0.09 0.54 16 10 O -0.52 -3.19 15.65 5.55 0.09 -3.10 16 11 N -0.73 0.99 5.36 -53.01 -0.28 0.71 16 12 C 0.13 0.00 4.15 -67.11 -0.28 -0.28 16 13 H 0.12 0.37 7.50 -51.93 -0.39 -0.02 16 14 C -0.14 0.23 7.66 -25.92 -0.20 0.03 16 15 C 0.08 -0.11 5.28 -25.83 -0.14 -0.25 16 16 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 17 O -0.55 -0.13 13.59 -35.23 -0.48 -0.61 16 18 C -0.18 0.20 7.72 -25.83 -0.20 0.00 16 19 N -0.54 -0.85 6.07 -5.44 -0.03 -0.88 16 20 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 21 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 22 H -0.26 -0.46 7.11 56.52 0.40 -0.05 16 23 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 24 H 0.14 0.08 6.22 -52.49 -0.33 -0.25 16 25 H 0.14 0.19 8.06 -52.49 -0.42 -0.23 16 26 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 27 H 0.12 -0.43 8.14 -51.93 -0.42 -0.85 16 28 H 0.40 -1.83 8.71 -40.82 -0.36 -2.18 16 29 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.10 -0.38 8.11 -51.93 -0.42 -0.80 16 31 H 0.39 -1.46 9.12 45.56 0.42 -1.04 16 32 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 33 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.41 0.00 8.96 -40.82 -0.37 -0.37 16 LS Contribution 294.81 15.07 4.44 4.44 Total: 0.00 -9.78 294.81 -8.30 -18.08 By element: Atomic # 1 Polarization: -5.79 SS G_CDS: -3.62 Total: -9.41 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -2.76 Total: -2.59 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -0.32 Total: -0.18 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -0.85 Total: -5.07 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: -5.20 Total: -5.28 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -9.78 -8.30 -18.08 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_14644196.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.273 kcal (2) G-P(sol) polarization free energy of solvation -9.778 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.051 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.079 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds