Wall clock time and date at job start Sat Mar 6 2021 19:39:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.47326 * 2 1 4 4 C 1.50704 * 109.47030 * 239.99563 * 2 1 3 5 5 C 1.34491 * 125.48800 * 150.04190 * 4 2 1 6 6 C 1.46756 * 106.35981 * 180.19735 * 5 4 2 7 7 C 1.47264 * 126.97088 * 179.72499 * 6 5 4 8 8 O 1.21621 * 120.00554 * 179.84854 * 7 6 5 9 9 N 1.34787 * 119.99726 * 359.85101 * 7 6 5 10 10 C 1.46502 * 119.99595 * 180.02562 * 9 7 6 11 11 H 1.08994 * 112.85069 * 336.19503 * 10 9 7 12 12 C 1.53774 * 113.61182 * 107.50806 * 10 9 7 13 13 C 1.53776 * 87.08678 * 89.11359 * 12 10 9 14 14 H 1.09005 * 113.68774 * 270.87155 * 13 12 10 15 15 O 1.42895 * 113.61783 * 139.97945 * 13 12 10 16 16 C 1.53781 * 87.07962 * 25.43050 * 13 12 10 17 17 C 1.36329 * 106.06097 * 359.60108 * 6 5 4 18 18 C 1.51006 * 126.79233 * 180.15154 * 17 6 5 19 19 C 1.53388 * 108.25477 * 164.63597 * 18 17 6 20 20 C 1.53166 * 109.04648 * 48.46129 * 19 18 17 21 21 C 1.53135 * 109.52207 * 290.42804 * 20 19 18 22 22 N 1.35207 * 108.66141 * 0.42099 * 17 6 5 23 23 H 0.96697 * 113.99716 * 59.99875 * 1 2 3 24 24 H 1.09003 * 109.46893 * 120.00509 * 2 1 3 25 25 H 1.48495 * 110.00221 * 298.68278 * 3 2 1 26 26 H 1.48506 * 109.99839 * 60.00200 * 3 2 1 27 27 H 1.07995 * 126.82334 * 359.93775 * 5 4 2 28 28 H 0.96999 * 120.00150 * 0.02562 * 9 7 6 29 29 H 1.09005 * 113.61080 * 203.66097 * 12 10 9 30 30 H 1.09006 * 113.61695 * 334.55821 * 12 10 9 31 31 H 0.96700 * 114.00275 * 82.50123 * 15 13 12 32 32 H 1.09006 * 113.61335 * 220.02348 * 16 13 12 33 33 H 1.08993 * 113.61645 * 89.11968 * 16 13 12 34 34 H 1.09002 * 109.70372 * 284.32930 * 18 17 6 35 35 H 1.08999 * 109.70663 * 44.90272 * 18 17 6 36 36 H 1.09001 * 109.54356 * 168.32574 * 19 18 17 37 37 H 1.08992 * 109.54423 * 288.50274 * 19 18 17 38 38 H 1.09005 * 109.45989 * 50.44015 * 20 19 18 39 39 H 1.09001 * 109.46279 * 170.41258 * 20 19 18 40 40 H 1.08998 * 109.56514 * 170.83648 * 21 20 19 41 41 H 1.09004 * 109.56162 * 291.06216 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 3.0861 -0.4469 -1.8675 6 6 3.1532 -1.3748 -3.0025 7 6 4.2280 -1.4723 -4.0045 8 8 4.1548 -2.2954 -4.8968 9 7 5.2930 -0.6493 -3.9325 10 6 6.3620 -0.7459 -4.9296 11 1 6.4124 -1.7267 -5.4024 12 6 6.3803 0.4233 -5.9283 13 6 7.2996 1.1541 -4.9356 14 1 6.7617 1.7460 -4.1949 15 8 8.3582 1.8799 -5.5635 16 6 7.7220 -0.2341 -4.4262 17 6 2.0200 -2.1301 -2.9397 18 6 1.6166 -3.2361 -3.8855 19 6 0.4945 -4.0472 -3.2255 20 6 -0.5704 -3.0846 -2.6913 21 6 -0.0063 -2.3089 -1.4974 22 7 1.2885 -1.7251 -1.8772 23 1 -0.3933 0.4417 -0.7650 24 1 1.7923 -0.5139 0.8900 25 1 1.5880 2.4585 -1.2241 26 1 1.5616 2.4678 1.2086 27 1 3.8167 0.3019 -1.5998 28 1 5.3516 0.0069 -3.2206 29 1 6.8641 0.1815 -6.8747 30 1 5.4096 0.9018 -6.0582 31 1 8.0987 2.7538 -5.8860 32 1 7.8344 -0.2862 -3.3432 33 1 8.5726 -0.6555 -4.9618 34 1 1.2586 -2.8070 -4.8213 35 1 2.4721 -3.8826 -4.0812 36 1 0.0460 -4.7149 -3.9612 37 1 0.9036 -4.6333 -2.4027 38 1 -0.8546 -2.3849 -3.4774 39 1 -1.4463 -3.6511 -2.3752 40 1 -0.6978 -1.5137 -1.2192 41 1 0.1300 -2.9858 -0.6540 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_16915396.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:12 Heat of formation + Delta-G solvation = -47.052264 kcal Electronic energy + Delta-G solvation = -24203.081118 eV Core-core repulsion = 20664.740245 eV Total energy + Delta-G solvation = -3538.340873 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.80192 -40.97687 -39.18793 -38.17615 -36.96234 -36.26331 -33.69004 -33.29138 -31.21153 -29.50423 -26.74581 -26.72630 -25.44726 -24.73019 -23.68104 -21.81805 -21.24475 -20.46367 -19.55526 -19.05372 -18.46360 -17.43857 -16.91792 -16.65776 -16.62054 -16.28012 -15.95977 -15.64826 -15.45867 -15.40041 -15.12477 -14.90850 -14.62250 -14.52087 -14.29180 -13.87999 -13.47420 -13.36217 -13.26846 -12.85389 -12.72016 -12.40690 -12.34997 -12.19166 -12.08497 -11.88643 -11.82839 -11.46700 -10.95206 -10.74395 -10.68713 -9.95240 -9.56386 -9.02477 -5.07309 0.82946 0.96077 1.38187 1.55692 1.69780 1.94509 2.39391 2.66977 3.01857 3.24401 3.39753 3.48729 3.49661 3.61589 3.68679 3.72349 3.75385 3.87536 3.97935 4.15062 4.22065 4.30456 4.35573 4.39103 4.52524 4.62299 4.65069 4.69968 4.76985 4.77714 4.82351 4.88182 4.97713 4.98486 5.01771 5.09141 5.13895 5.20270 5.67226 5.73754 5.99064 6.18233 6.19688 6.68412 6.71503 7.49163 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.051 4.051 3 Si 0.711 3.289 4 C -0.012 4.012 5 C -0.162 4.162 6 C -0.236 4.236 7 C 0.598 3.402 8 O -0.546 6.546 9 N -0.713 5.713 10 C 0.125 3.875 11 H 0.110 0.890 12 C -0.182 4.182 13 C 0.075 3.925 14 H 0.081 0.919 15 O -0.560 6.560 16 C -0.136 4.136 17 C 0.122 3.878 18 C -0.056 4.056 19 C -0.129 4.129 20 C -0.139 4.139 21 C 0.099 3.901 22 N -0.427 5.427 23 H 0.376 0.624 24 H 0.121 0.879 25 H -0.257 1.257 26 H -0.254 1.254 27 H 0.153 0.847 28 H 0.400 0.600 29 H 0.098 0.902 30 H 0.073 0.927 31 H 0.379 0.621 32 H 0.081 0.919 33 H 0.104 0.896 34 H 0.088 0.912 35 H 0.101 0.899 36 H 0.080 0.920 37 H 0.069 0.931 38 H 0.074 0.926 39 H 0.088 0.912 40 H 0.103 0.897 41 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.149 2.005 2.303 3.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.160 4.160 3 Si 0.610 3.390 4 C -0.121 4.121 5 C -0.186 4.186 6 C -0.245 4.245 7 C 0.387 3.613 8 O -0.425 6.425 9 N -0.364 5.364 10 C 0.019 3.981 11 H 0.128 0.872 12 C -0.221 4.221 13 C 0.016 3.984 14 H 0.099 0.901 15 O -0.365 6.365 16 C -0.174 4.174 17 C 0.004 3.996 18 C -0.094 4.094 19 C -0.167 4.167 20 C -0.177 4.177 21 C -0.022 4.022 22 N -0.103 5.103 23 H 0.225 0.775 24 H 0.139 0.861 25 H -0.181 1.181 26 H -0.179 1.179 27 H 0.170 0.830 28 H 0.235 0.765 29 H 0.117 0.883 30 H 0.092 0.908 31 H 0.227 0.773 32 H 0.099 0.901 33 H 0.122 0.878 34 H 0.106 0.894 35 H 0.119 0.881 36 H 0.098 0.902 37 H 0.087 0.913 38 H 0.093 0.907 39 H 0.107 0.893 40 H 0.121 0.879 41 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.339 1.278 2.513 3.121 hybrid contribution -1.386 0.667 -0.191 1.550 sum -2.725 1.945 2.321 4.074 Atomic orbital electron populations 1.86592 1.18059 1.79533 1.49732 1.24838 0.83450 1.11167 0.96567 0.94561 0.91315 0.72513 0.80613 1.20639 0.96238 0.95690 0.99496 1.21628 0.97824 1.02664 0.96510 1.19791 0.98127 1.05068 1.01513 1.17303 0.80665 0.79795 0.83505 1.90770 1.78765 1.36932 1.35996 1.45445 1.21014 1.38905 1.30991 1.21575 0.86442 1.00179 0.89939 0.87194 1.24163 1.00741 0.97874 0.99297 1.23451 0.88412 0.91958 0.94570 0.90111 1.86530 1.37418 1.33761 1.78797 1.23462 0.97518 0.94293 1.02109 1.20401 0.91225 0.97568 0.90401 1.20524 0.99467 0.93577 0.95797 1.21725 0.95826 0.97907 1.01234 1.21943 0.99280 0.99002 0.97425 1.22286 0.82594 0.98948 0.98338 1.43864 1.17436 1.27119 1.21931 0.77543 0.86108 1.18080 1.17891 0.83001 0.76501 0.88336 0.90840 0.77309 0.90085 0.87781 0.89372 0.88099 0.90167 0.91250 0.90733 0.89301 0.87913 0.89864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.41 10.28 -35.23 -0.36 0.05 16 2 C -0.05 0.07 3.00 36.01 0.11 0.18 16 3 Si 0.71 -1.60 31.11 -169.99 -5.29 -6.89 16 4 C -0.01 0.00 6.15 -81.88 -0.50 -0.50 16 5 C -0.16 0.03 9.09 -37.47 -0.34 -0.31 16 6 C -0.24 -0.54 6.28 -103.48 -0.65 -1.19 16 7 C 0.60 1.97 7.81 -12.59 -0.10 1.87 16 8 O -0.55 -3.54 14.94 5.26 0.08 -3.46 16 9 N -0.71 -0.22 5.26 -54.14 -0.28 -0.51 16 10 C 0.12 0.06 4.33 -67.12 -0.29 -0.23 16 11 H 0.11 0.24 7.46 -51.93 -0.39 -0.15 16 12 C -0.18 0.01 7.71 -25.93 -0.20 -0.19 16 13 C 0.08 -0.07 5.09 -25.92 -0.13 -0.20 16 14 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 15 O -0.56 -0.23 13.67 -35.23 -0.48 -0.71 16 16 C -0.14 0.09 7.66 -25.92 -0.20 -0.10 16 17 C 0.12 0.26 6.57 -81.64 -0.54 -0.28 16 18 C -0.06 -0.07 5.31 -27.53 -0.15 -0.21 16 19 C -0.13 0.13 5.98 -26.44 -0.16 -0.03 16 20 C -0.14 0.27 5.92 -26.58 -0.16 0.11 16 21 C 0.10 -0.12 6.21 -3.69 -0.02 -0.14 16 22 N -0.43 -0.29 3.11 -107.37 -0.33 -0.63 16 23 H 0.38 -1.14 8.26 45.56 0.38 -0.76 16 24 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 25 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 26 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 27 H 0.15 -0.54 6.52 -52.49 -0.34 -0.89 16 28 H 0.40 -0.92 7.83 -40.82 -0.32 -1.24 16 29 H 0.10 0.04 8.14 -51.93 -0.42 -0.39 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 31 H 0.38 -1.31 9.12 45.56 0.42 -0.90 16 32 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 33 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.09 0.12 8.14 -51.93 -0.42 -0.30 16 35 H 0.10 0.25 7.42 -51.93 -0.39 -0.14 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 37 H 0.07 -0.05 8.12 -51.93 -0.42 -0.47 16 38 H 0.07 -0.12 8.11 -51.93 -0.42 -0.54 16 39 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 40 H 0.10 -0.21 5.68 -51.93 -0.29 -0.50 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 329.46 15.07 4.96 4.96 Total: 0.00 -8.43 329.46 -10.23 -18.66 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -5.20 Total: -10.25 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -3.33 Total: -1.22 kcal Atomic # 7 Polarization: -0.51 SS G_CDS: -0.62 Total: -1.13 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.77 Total: -4.13 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.29 Total: -6.89 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -8.43 -10.23 -18.66 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_16915396.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.389 kcal (2) G-P(sol) polarization free energy of solvation -8.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.823 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.663 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds