Wall clock time and date at job start Sat Mar 6 2021 19:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86297 * 109.47241 * 2 1 4 4 C 1.50705 * 109.47388 * 120.00139 * 2 1 3 5 5 C 1.38709 * 120.02672 * 75.01909 * 4 2 1 6 6 O 1.35895 * 120.05826 * 359.96119 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.85470 * 25.33033 * 11 10 8 13 13 C 1.53784 * 113.61539 * 156.53125 * 11 10 8 14 14 C 1.53771 * 87.08551 * 139.97650 * 13 11 10 15 15 H 1.09002 * 113.61943 * 219.93285 * 14 13 11 16 16 O 1.42902 * 113.61705 * 89.11417 * 14 13 11 17 17 C 1.53782 * 113.61273 * 254.13343 * 11 10 8 18 18 C 1.38759 * 119.88803 * 179.97438 * 5 4 2 19 19 C 1.38126 * 119.94113 * 359.97438 * 18 5 4 20 20 C 1.38290 * 120.05768 * 359.97438 * 19 18 5 21 21 C 1.38164 * 120.02639 * 255.00220 * 4 2 1 22 22 H 0.96696 * 114.00364 * 60.00149 * 1 2 3 23 23 H 1.09006 * 109.47457 * 240.00019 * 2 1 3 24 24 H 1.48500 * 110.00138 * 298.68201 * 3 2 1 25 25 H 1.48501 * 110.00014 * 59.99854 * 3 2 1 26 26 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 27 27 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 28 28 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 29 29 H 1.09004 * 113.61005 * 254.53257 * 13 11 10 30 30 H 1.08999 * 113.61595 * 25.33886 * 13 11 10 31 31 H 0.96697 * 114.00347 * 180.02562 * 16 14 13 32 32 H 1.09002 * 113.61368 * 334.56736 * 17 11 10 33 33 H 1.08999 * 113.61852 * 105.47265 * 17 11 10 34 34 H 1.07998 * 120.02758 * 179.97438 * 18 5 4 35 35 H 1.07995 * 119.97120 * 179.97438 * 19 18 5 36 36 H 1.07995 * 119.94278 * 180.27458 * 20 19 18 37 37 H 1.07997 * 119.97418 * 0.04002 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8701 -2.0941 1.3067 6 8 1.3563 -2.8107 0.2727 7 6 1.3241 -4.2317 0.4208 8 6 0.7257 -4.8521 -0.8154 9 8 0.3621 -4.1469 -1.7326 10 7 0.5936 -6.1906 -0.9010 11 6 0.0124 -6.7938 -2.1030 12 1 0.1306 -6.1702 -2.9891 13 6 0.4287 -8.2582 -2.3203 14 6 -1.0202 -8.5224 -2.7623 15 1 -1.4210 -9.4697 -2.4016 16 8 -1.2373 -8.3247 -4.1608 17 6 -1.4216 -7.3113 -1.9007 18 6 2.3340 -2.7453 2.4408 19 6 2.8559 -2.0146 3.4904 20 6 2.9169 -0.6353 3.4114 21 6 2.4537 0.0159 2.2833 22 1 -0.3934 0.4416 -0.7650 23 1 1.7923 -0.5138 -0.8900 24 1 1.5879 2.4585 -1.2242 25 1 1.5614 2.4679 1.2085 26 1 2.3384 -4.6054 0.5608 27 1 0.7177 -4.4929 1.2880 28 1 0.8840 -6.7547 -0.1672 29 1 1.1597 -8.3905 -3.1180 30 1 0.7073 -8.7739 -1.4013 31 1 -2.1469 -8.4890 -4.4448 32 1 -1.6512 -7.5681 -0.8665 33 1 -2.1824 -6.6803 -2.3602 34 1 2.2870 -3.8225 2.5027 35 1 3.2167 -2.5209 4.3734 36 1 3.3294 -0.0662 4.2313 37 1 2.5013 1.0932 2.2246 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_2989392.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:14 Heat of formation + Delta-G solvation = -90.880434 kcal Electronic energy + Delta-G solvation = -21563.755464 eV Core-core repulsion = 18081.333016 eV Total energy + Delta-G solvation = -3482.422448 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.68659 -41.03011 -39.75791 -38.43177 -37.64303 -36.31841 -34.07392 -32.87987 -31.26163 -29.50150 -26.81137 -26.67276 -25.38881 -23.44823 -22.49195 -21.75098 -20.92353 -19.37058 -18.65404 -18.60957 -18.12172 -17.47810 -17.32186 -16.95500 -16.77887 -16.22514 -15.71037 -15.50899 -15.49131 -15.12201 -14.87270 -14.50946 -13.96385 -13.84132 -13.78780 -13.59290 -13.48351 -13.17600 -13.09418 -12.64734 -12.33310 -12.13708 -11.83037 -11.79508 -11.49297 -11.11873 -10.78216 -10.45984 -10.18327 -9.97370 -9.22288 -4.98098 0.22490 0.41605 1.26240 1.36716 1.47392 1.55567 1.87405 2.58408 2.66136 3.09041 3.39601 3.42670 3.52009 3.64633 3.76111 3.76933 3.92574 3.94141 4.04481 4.10515 4.15814 4.24269 4.33640 4.48739 4.51770 4.64798 4.66071 4.78906 4.90936 4.96495 4.96809 5.03522 5.27853 5.38589 5.41545 5.52322 5.75424 6.25408 6.43114 6.53858 6.81732 7.08176 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.087 4.087 3 Si 0.782 3.218 4 C -0.131 4.131 5 C 0.127 3.873 6 O -0.314 6.314 7 C 0.037 3.963 8 C 0.511 3.489 9 O -0.575 6.575 10 N -0.698 5.698 11 C 0.119 3.881 12 H 0.080 0.920 13 C -0.129 4.129 14 C 0.081 3.919 15 H 0.102 0.898 16 O -0.577 6.577 17 C -0.180 4.180 18 C -0.211 4.211 19 C -0.074 4.074 20 C -0.154 4.154 21 C -0.089 4.089 22 H 0.387 0.613 23 H 0.064 0.936 24 H -0.291 1.291 25 H -0.281 1.281 26 H 0.128 0.872 27 H 0.121 0.879 28 H 0.423 0.577 29 H 0.074 0.926 30 H 0.133 0.867 31 H 0.399 0.601 32 H 0.113 0.887 33 H 0.059 0.941 34 H 0.158 0.842 35 H 0.158 0.842 36 H 0.152 0.848 37 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.461 -6.382 5.603 9.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.195 4.195 3 Si 0.685 3.315 4 C -0.132 4.132 5 C 0.082 3.918 6 O -0.227 6.227 7 C -0.041 4.041 8 C 0.297 3.703 9 O -0.453 6.453 10 N -0.352 5.352 11 C 0.014 3.986 12 H 0.098 0.902 13 C -0.167 4.167 14 C 0.021 3.979 15 H 0.119 0.881 16 O -0.386 6.386 17 C -0.219 4.219 18 C -0.229 4.229 19 C -0.092 4.092 20 C -0.172 4.172 21 C -0.107 4.107 22 H 0.237 0.763 23 H 0.082 0.918 24 H -0.218 1.218 25 H -0.208 1.208 26 H 0.145 0.855 27 H 0.138 0.862 28 H 0.262 0.738 29 H 0.092 0.908 30 H 0.151 0.849 31 H 0.250 0.750 32 H 0.131 0.869 33 H 0.078 0.922 34 H 0.176 0.824 35 H 0.176 0.824 36 H 0.170 0.830 37 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 3.641 -5.171 5.320 8.264 hybrid contribution -1.892 -0.447 -0.585 2.030 sum 1.749 -5.618 4.735 7.553 Atomic orbital electron populations 1.86545 1.19041 1.80832 1.50180 1.25072 0.83806 1.12553 0.98031 0.94086 0.89826 0.70926 0.76614 1.18876 1.05744 0.91025 0.97542 1.19066 0.94189 0.91004 0.87560 1.86159 1.78093 1.18774 1.39701 1.22725 1.04622 0.79847 0.96857 1.20647 0.78120 0.83242 0.88254 1.90755 1.50415 1.62635 1.41526 1.45687 1.63304 1.05476 1.20740 1.22475 0.94393 0.93886 0.87860 0.90228 1.23499 0.96401 0.93381 1.03392 1.22662 0.97057 0.97227 0.80958 0.88054 1.86436 1.36113 1.92691 1.23371 1.24212 0.96598 0.98614 1.02474 1.21610 1.05506 1.01942 0.93876 1.21422 0.95411 0.94038 0.98282 1.21408 1.02082 0.95278 0.98469 1.21153 0.96841 1.00317 0.92385 0.76334 0.91804 1.21815 1.20809 0.85487 0.86185 0.73821 0.90753 0.84862 0.75006 0.86871 0.92212 0.82404 0.82448 0.82998 0.84087 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -6.62 12.86 -148.98 -1.92 -8.53 16 2 C -0.09 -0.72 2.37 71.24 0.17 -0.55 16 3 Si 0.78 2.08 30.20 68.60 2.07 4.15 16 4 C -0.13 -1.04 5.30 -19.77 -0.10 -1.15 16 5 C 0.13 0.89 6.66 22.51 0.15 1.04 16 6 O -0.31 -3.05 9.00 -73.33 -0.66 -3.71 16 7 C 0.04 -0.01 5.22 71.24 0.37 0.36 16 8 C 0.51 2.94 7.91 87.66 0.69 3.64 16 9 O -0.57 -10.51 16.12 16.01 0.26 -10.25 16 10 N -0.70 1.52 5.36 -440.04 -2.36 -0.84 16 11 C 0.12 0.15 4.15 45.52 0.19 0.33 16 12 H 0.08 0.78 7.50 -2.39 -0.02 0.76 16 13 C -0.13 0.55 7.66 31.12 0.24 0.79 16 14 C 0.08 -0.27 5.28 31.18 0.16 -0.11 16 15 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 16 O -0.58 -0.70 13.59 -148.98 -2.02 -2.72 16 17 C -0.18 0.31 7.72 31.18 0.24 0.55 16 18 C -0.21 0.01 9.04 22.37 0.20 0.21 16 19 C -0.07 0.15 10.04 22.26 0.22 0.37 16 20 C -0.15 0.05 10.04 22.28 0.22 0.28 16 21 C -0.09 -0.32 8.66 22.25 0.19 -0.12 16 22 H 0.39 1.77 8.74 -74.06 -0.65 1.13 16 23 H 0.06 0.60 7.83 -2.38 -0.02 0.58 16 24 H -0.29 -2.08 7.11 99.48 0.71 -1.37 16 25 H -0.28 -1.89 6.75 99.48 0.67 -1.22 16 26 H 0.13 -0.94 7.66 -2.39 -0.02 -0.96 16 27 H 0.12 -0.74 7.66 -2.39 -0.02 -0.76 16 28 H 0.42 -4.70 8.71 -92.71 -0.81 -5.51 16 29 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 30 H 0.13 -1.48 8.11 -2.39 -0.02 -1.50 16 31 H 0.40 -2.71 9.12 -74.06 -0.68 -3.38 16 32 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 33 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 34 H 0.16 -1.11 6.30 -2.91 -0.02 -1.13 16 35 H 0.16 -1.27 8.06 -2.91 -0.02 -1.29 16 36 H 0.15 -0.83 8.06 -2.91 -0.02 -0.85 16 37 H 0.14 0.13 4.90 -2.91 -0.01 0.11 16 Total: 0.00 -30.48 316.24 -2.68 -33.15 By element: Atomic # 1 Polarization: -15.90 SS G_CDS: -1.00 Total: -16.90 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: 2.95 Total: 5.64 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -2.36 Total: -0.84 kcal Atomic # 8 Polarization: -20.87 SS G_CDS: -4.34 Total: -25.22 kcal Atomic # 14 Polarization: 2.08 SS G_CDS: 2.07 Total: 4.15 kcal Total: -30.48 -2.68 -33.15 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_2989392.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.728 kcal (2) G-P(sol) polarization free energy of solvation -30.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.678 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.880 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds