Wall clock time and date at job start Sat Mar 6 2021 19:39:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47182 * 2 1 4 4 C 1.50696 * 109.47185 * 119.99778 * 2 1 3 5 5 C 1.38274 * 119.94301 * 65.00307 * 4 2 1 6 6 C 1.38141 * 120.05552 * 180.27916 * 5 4 2 7 7 C 1.38738 * 119.94395 * 359.44290 * 6 5 4 8 8 O 1.35898 * 120.05510 * 180.29870 * 7 6 5 9 9 C 1.42901 * 117.00084 * 0.27943 * 8 7 6 10 10 C 1.53002 * 109.47063 * 179.97438 * 9 8 7 11 11 C 1.50697 * 109.47304 * 179.97438 * 10 9 8 12 12 O 1.21284 * 119.99904 * 0.02562 * 11 10 9 13 13 N 1.34773 * 120.00250 * 180.02562 * 11 10 9 14 14 C 1.46507 * 120.00026 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.85008 * 23.79845 * 14 13 11 16 16 C 1.53773 * 113.61366 * 155.00006 * 14 13 11 17 17 C 1.53784 * 87.08177 * 139.97568 * 16 14 13 18 18 H 1.08991 * 113.61739 * 220.01645 * 17 16 14 19 19 O 1.42909 * 113.60997 * 89.11361 * 17 16 14 20 20 C 1.53778 * 87.08196 * 334.56893 * 17 16 14 21 21 C 1.38730 * 119.88604 * 0.57278 * 7 6 5 22 22 C 1.38149 * 119.94512 * 359.70901 * 21 7 6 23 23 H 0.96696 * 114.00119 * 59.99558 * 1 2 3 24 24 H 1.08998 * 109.47382 * 240.00321 * 2 1 3 25 25 H 1.48498 * 109.99969 * 298.68280 * 3 2 1 26 26 H 1.48503 * 110.00048 * 59.99824 * 3 2 1 27 27 H 1.08002 * 119.96836 * 359.97438 * 5 4 2 28 28 H 1.07998 * 120.02987 * 179.70379 * 6 5 4 29 29 H 1.08998 * 109.47080 * 299.99770 * 9 8 7 30 30 H 1.08996 * 109.47179 * 59.99778 * 9 8 7 31 31 H 1.08998 * 109.47210 * 299.99967 * 10 9 8 32 32 H 1.09004 * 109.46922 * 60.00270 * 10 9 8 33 33 H 0.96993 * 120.00095 * 0.02562 * 13 11 10 34 34 H 1.09002 * 113.61758 * 254.52623 * 16 14 13 35 35 H 1.09006 * 113.61740 * 25.34679 * 16 14 13 36 36 H 0.96697 * 113.99373 * 180.02562 * 19 17 16 37 37 H 1.08999 * 113.61010 * 270.88521 * 20 17 16 38 38 H 1.08994 * 113.61919 * 139.97409 * 20 17 16 39 39 H 1.07997 * 120.02650 * 179.67529 * 21 7 6 40 40 H 1.07997 * 119.96847 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.6841 -2.0605 1.3972 6 6 2.1385 -2.7127 2.5270 7 6 2.8535 -2.0145 3.4893 8 8 3.3068 -2.6552 4.5987 9 6 3.0162 -4.0502 4.7065 10 6 3.6026 -4.5940 6.0109 11 6 3.2956 -6.0649 6.1249 12 8 2.6698 -6.6235 5.2489 13 7 3.7163 -6.7598 7.2003 14 6 3.4183 -8.1900 7.3109 15 1 3.2393 -8.6610 6.3444 16 6 4.4122 -8.9596 8.1966 17 6 3.2027 -9.7372 8.7421 18 1 3.2505 -9.9223 9.8151 19 8 2.8894 -10.9104 7.9886 20 6 2.3472 -8.5162 8.3651 21 6 3.1000 -0.6598 3.3198 22 6 2.6383 -0.0109 2.1909 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 1.5879 2.4586 -1.2242 26 1 1.5615 2.4679 1.2085 27 1 1.1309 -2.6045 0.6459 28 1 1.9410 -3.7663 2.6591 29 1 1.9362 -4.1975 4.7040 30 1 3.4571 -4.5795 3.8618 31 1 4.6826 -4.4466 6.0130 32 1 3.1620 -4.0647 6.8558 33 1 4.2165 -6.3131 7.9011 34 1 5.1110 -9.5780 7.6333 35 1 4.9051 -8.3366 8.9430 36 1 2.1294 -11.4034 8.3267 37 1 2.2746 -7.7723 9.1584 38 1 1.3790 -8.7767 7.9376 39 1 3.6518 -0.1129 4.0699 40 1 2.8297 1.0438 2.0588 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_4549602.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:20 Heat of formation + Delta-G solvation = -97.157980 kcal Electronic energy + Delta-G solvation = -22451.234725 eV Core-core repulsion = 18813.002443 eV Total energy + Delta-G solvation = -3638.232282 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.44274 -41.05270 -39.81405 -38.97028 -37.29913 -36.32100 -34.09170 -33.10638 -31.99701 -31.39688 -26.91580 -26.86572 -25.94346 -24.73065 -23.32555 -21.98371 -21.55602 -20.89788 -19.42888 -18.61019 -18.48307 -17.86922 -17.46723 -17.28821 -16.89423 -16.71393 -16.27892 -15.90630 -15.73506 -15.45919 -15.08638 -14.56091 -14.46724 -14.21342 -14.20542 -13.88749 -13.74584 -13.60803 -13.57996 -13.26844 -12.90281 -12.86206 -12.34759 -12.19027 -11.95420 -11.70745 -11.57370 -11.56736 -11.07460 -10.82420 -10.43184 -10.12344 -9.92838 -9.08748 -4.93866 0.37326 0.45630 1.32057 1.51468 1.61538 1.72046 1.97967 2.49130 2.71988 2.91571 3.33026 3.42664 3.52210 3.56704 3.68146 3.83088 3.85713 3.89469 3.96908 3.99975 4.02133 4.28349 4.30858 4.41250 4.43910 4.47117 4.51701 4.60885 4.67843 4.70337 4.75731 4.82919 4.88892 5.02628 5.08340 5.28194 5.41342 5.42970 5.61420 5.78164 6.34765 6.43047 6.49062 6.56192 7.10181 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.682 3.318 4 C -0.112 4.112 5 C -0.051 4.051 6 C -0.206 4.206 7 C 0.137 3.863 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.521 3.479 12 O -0.537 6.537 13 N -0.720 5.720 14 C 0.128 3.872 15 H 0.121 0.879 16 C -0.141 4.141 17 C 0.081 3.919 18 H 0.076 0.924 19 O -0.550 6.550 20 C -0.185 4.185 21 C -0.146 4.146 22 C -0.076 4.076 23 H 0.378 0.622 24 H 0.074 0.926 25 H -0.262 1.262 26 H -0.255 1.255 27 H 0.127 0.873 28 H 0.133 0.867 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.108 0.892 32 H 0.107 0.893 33 H 0.403 0.597 34 H 0.086 0.914 35 H 0.100 0.900 36 H 0.385 0.615 37 H 0.092 0.908 38 H 0.079 0.921 39 H 0.136 0.864 40 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.380 0.072 3.468 4.843 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.584 3.416 4 C -0.112 4.112 5 C -0.069 4.069 6 C -0.225 4.225 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.307 3.693 12 O -0.413 6.413 13 N -0.371 5.371 14 C 0.024 3.976 15 H 0.138 0.862 16 C -0.179 4.179 17 C 0.021 3.979 18 H 0.094 0.906 19 O -0.356 6.356 20 C -0.224 4.224 21 C -0.165 4.165 22 C -0.094 4.094 23 H 0.226 0.774 24 H 0.092 0.908 25 H -0.187 1.187 26 H -0.180 1.180 27 H 0.145 0.855 28 H 0.151 0.849 29 H 0.091 0.909 30 H 0.092 0.908 31 H 0.126 0.874 32 H 0.125 0.875 33 H 0.238 0.762 34 H 0.104 0.896 35 H 0.118 0.882 36 H 0.233 0.767 37 H 0.111 0.889 38 H 0.097 0.903 39 H 0.154 0.846 40 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.433 0.464 3.194 4.712 hybrid contribution -1.516 -0.313 0.129 1.553 sum 1.917 0.151 3.323 3.840 Atomic orbital electron populations 1.86602 1.18013 1.80101 1.49697 1.24739 0.84285 1.10842 0.98243 0.95085 0.91658 0.74719 0.80142 1.19138 1.01626 0.94177 0.96283 1.20801 0.96041 0.93588 0.96445 1.21364 1.03951 1.01070 0.96104 1.18973 0.93818 0.92067 0.85986 1.85962 1.74030 1.23574 1.39430 1.22421 1.01127 0.78947 0.97681 1.21480 1.04549 0.92555 0.99573 1.20351 0.78698 0.88656 0.81601 1.90758 1.39617 1.71314 1.39635 1.45980 1.57833 1.10158 1.23177 1.22542 0.95514 0.79823 0.99747 0.86160 1.23463 0.96894 0.97941 0.99611 1.22478 0.95979 0.84708 0.94701 0.90602 1.86476 1.53752 1.38517 1.56895 1.24174 0.99624 0.98880 0.99728 1.20342 1.04930 0.91691 0.99503 1.20784 0.96768 0.99245 0.92572 0.77383 0.90767 1.18747 1.17985 0.85489 0.84940 0.90936 0.90836 0.87374 0.87467 0.76222 0.89570 0.88189 0.76657 0.88915 0.90259 0.84595 0.84959 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.10 12.81 -35.23 -0.45 -1.55 16 2 C -0.07 -0.05 2.79 36.00 0.10 0.05 16 3 Si 0.68 -0.24 29.85 -169.99 -5.07 -5.32 16 4 C -0.11 -0.25 5.38 -104.60 -0.56 -0.82 16 5 C -0.05 -0.13 9.68 -39.60 -0.38 -0.51 16 6 C -0.21 -0.52 9.04 -39.43 -0.36 -0.88 16 7 C 0.14 0.37 6.69 -39.21 -0.26 0.11 16 8 O -0.32 -0.66 10.14 -19.42 -0.20 -0.86 16 9 C 0.07 0.06 4.03 37.16 0.15 0.21 16 10 C -0.14 0.22 6.07 -27.88 -0.17 0.05 16 11 C 0.52 0.42 7.83 -10.99 -0.09 0.33 16 12 O -0.54 -2.74 15.58 5.55 0.09 -2.65 16 13 N -0.72 1.08 5.35 -53.02 -0.28 0.79 16 14 C 0.13 -0.03 4.17 -67.12 -0.28 -0.31 16 15 H 0.12 0.32 7.46 -51.93 -0.39 -0.07 16 16 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 17 C 0.08 -0.13 5.28 -25.92 -0.14 -0.26 16 18 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 19 O -0.55 -0.01 13.59 -35.23 -0.48 -0.49 16 20 C -0.18 0.24 7.71 -25.92 -0.20 0.04 16 21 C -0.15 -0.27 9.99 -39.43 -0.39 -0.66 16 22 C -0.08 -0.12 8.66 -39.61 -0.34 -0.46 16 23 H 0.38 -0.76 8.74 45.56 0.40 -0.36 16 24 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 25 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 26 H -0.26 -0.67 7.05 56.52 0.40 -0.28 16 27 H 0.13 0.20 8.06 -52.49 -0.42 -0.22 16 28 H 0.13 0.21 6.30 -52.49 -0.33 -0.12 16 29 H 0.07 0.10 7.61 -51.93 -0.40 -0.29 16 30 H 0.07 0.08 7.63 -51.93 -0.40 -0.31 16 31 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 32 H 0.11 -0.32 8.14 -51.93 -0.42 -0.75 16 33 H 0.40 -1.83 8.73 -40.82 -0.36 -2.19 16 34 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.10 -0.40 8.12 -51.93 -0.42 -0.82 16 36 H 0.39 -1.53 9.12 45.56 0.42 -1.11 16 37 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 40 H 0.13 -0.06 4.86 -52.49 -0.26 -0.31 16 LS Contribution 337.95 15.07 5.09 5.09 Total: 0.00 -9.63 337.95 -9.15 -18.78 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -4.73 Total: -10.73 kcal Atomic # 6 Polarization: 0.06 SS G_CDS: -3.12 Total: -3.07 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.79 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -1.04 Total: -5.56 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: -5.07 Total: -5.32 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -9.63 -9.15 -18.78 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_4549602.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.378 kcal (2) G-P(sol) polarization free energy of solvation -9.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.153 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.158 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds