Wall clock time and date at job start Sat Mar 6 2021 19:39:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46895 * 2 1 4 4 C 1.50701 * 109.47107 * 240.00039 * 2 1 3 5 5 C 1.38242 * 119.97227 * 120.01877 * 4 2 1 6 6 C 1.38287 * 120.11134 * 180.02562 * 5 4 2 7 7 C 1.38114 * 120.05679 * 359.67839 * 6 5 4 8 8 C 1.38760 * 119.94488 * 0.59795 * 7 6 5 9 9 O 1.35896 * 120.05732 * 179.69860 * 8 7 6 10 10 C 1.42893 * 117.00255 * 359.72318 * 9 8 7 11 11 C 1.53000 * 109.47578 * 180.02562 * 10 9 8 12 12 C 1.52995 * 109.47310 * 180.02562 * 11 10 9 13 13 C 1.50707 * 109.47139 * 179.97438 * 12 11 10 14 14 O 1.21278 * 119.99461 * 0.02562 * 13 12 11 15 15 N 1.34770 * 120.00237 * 179.97438 * 13 12 11 16 16 C 1.46499 * 120.00157 * 179.97438 * 15 13 12 17 17 H 1.08996 * 112.84800 * 23.80973 * 16 15 13 18 18 C 1.53777 * 113.61160 * 155.00230 * 16 15 13 19 19 C 1.53781 * 87.08336 * 89.20358 * 18 16 15 20 20 H 1.09002 * 113.61228 * 270.88201 * 19 18 16 21 21 O 1.42898 * 113.61632 * 140.05947 * 19 18 16 22 22 C 1.53775 * 113.69461 * 252.53673 * 16 15 13 23 23 C 1.38162 * 119.97158 * 299.99712 * 4 2 1 24 24 H 0.96698 * 114.00640 * 60.00165 * 1 2 3 25 25 H 1.09001 * 109.47545 * 120.00007 * 2 1 3 26 26 H 1.48500 * 109.99784 * 60.00184 * 3 2 1 27 27 H 1.48504 * 109.99891 * 181.31963 * 3 2 1 28 28 H 1.08005 * 119.94406 * 359.97438 * 5 4 2 29 29 H 1.08004 * 119.96656 * 179.97438 * 6 5 4 30 30 H 1.08000 * 120.02959 * 180.31713 * 7 6 5 31 31 H 1.09005 * 109.46731 * 59.99994 * 10 9 8 32 32 H 1.09001 * 109.47673 * 300.00639 * 10 9 8 33 33 H 1.08998 * 109.46561 * 59.99854 * 11 10 9 34 34 H 1.09005 * 109.46756 * 300.00305 * 11 10 9 35 35 H 1.08998 * 109.47131 * 60.00311 * 12 11 10 36 36 H 1.08998 * 109.47555 * 299.99863 * 12 11 10 37 37 H 0.97006 * 119.99979 * 0.02562 * 15 13 12 38 38 H 1.08997 * 113.61941 * 334.65065 * 18 16 15 39 39 H 1.09009 * 113.68972 * 203.76145 * 18 16 15 40 40 H 0.96697 * 114.00154 * 181.52786 * 21 19 18 41 41 H 1.08993 * 113.61636 * 156.31970 * 22 16 15 42 42 H 1.09008 * 113.61006 * 25.42212 * 22 16 15 43 43 H 1.08005 * 120.02958 * 0.04742 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0381 -2.1399 6 6 3.1885 -0.6871 -3.2702 7 6 2.8620 -2.0110 -3.4899 8 6 2.0594 -2.6864 -2.5816 9 8 1.7318 -3.9873 -2.7986 10 6 2.2435 -4.5958 -3.9859 11 6 1.7721 -6.0496 -4.0579 12 6 2.3206 -6.7013 -5.3288 13 6 1.8567 -8.1334 -5.3994 14 8 1.1560 -8.5878 -4.5199 15 7 2.2197 -8.9089 -6.4402 16 6 1.7692 -10.3012 -6.5085 17 1 0.8590 -10.4801 -5.9361 18 6 1.7175 -10.8624 -7.9393 19 6 3.1805 -11.2919 -7.7396 20 1 3.9029 -10.5273 -8.0252 21 8 3.4813 -12.5743 -8.2938 22 6 2.8825 -11.3252 -6.2313 23 6 1.5973 -2.0332 -1.4485 24 1 -0.3934 0.4416 -0.7650 25 1 1.7924 -0.5138 0.8900 26 1 1.5614 2.4679 1.2085 27 1 3.5346 1.7704 -0.0321 28 1 2.9864 0.9959 -1.9677 29 1 3.8092 -0.1595 -3.9794 30 1 3.2274 -2.5188 -4.3703 31 1 3.3331 -4.5672 -3.9682 32 1 1.8801 -4.0527 -4.8583 33 1 0.6826 -6.0777 -4.0758 34 1 2.1353 -6.5929 -3.1855 35 1 3.4100 -6.6732 -5.3104 36 1 1.9578 -6.1581 -6.2014 37 1 2.7798 -8.5453 -7.1438 38 1 1.5877 -10.0968 -8.7042 39 1 1.0289 -11.6992 -8.0569 40 1 4.3940 -12.8602 -8.1510 41 1 2.5123 -12.2884 -5.8805 42 1 3.6933 -10.9331 -5.6173 43 1 0.9757 -2.5579 -0.7379 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_4549616.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:25 Heat of formation + Delta-G solvation = -105.332373 kcal Electronic energy + Delta-G solvation = -23995.638998 eV Core-core repulsion = 20201.514629 eV Total energy + Delta-G solvation = -3794.124369 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.45842 -41.21813 -39.76363 -39.13231 -37.28132 -36.48163 -34.96243 -33.76225 -32.44908 -31.23265 -28.56644 -26.91075 -26.84397 -25.39050 -23.75628 -23.48525 -21.93928 -21.59549 -20.62609 -19.21788 -18.86192 -18.05136 -17.78711 -17.55515 -17.18306 -16.99824 -16.83055 -16.50581 -16.17308 -16.02849 -15.49035 -15.37333 -14.99730 -14.73734 -14.64147 -14.21824 -14.14024 -13.74468 -13.63280 -13.40409 -13.25521 -13.06379 -12.84521 -12.75089 -12.53296 -12.42168 -12.26168 -11.91024 -11.69816 -11.63112 -11.60075 -10.96368 -10.89220 -10.48770 -10.18739 -9.90169 -9.22396 -5.02887 0.22081 0.42393 1.28329 1.52609 1.63907 1.79137 1.97280 2.27209 2.69074 3.09521 3.32017 3.44540 3.48424 3.52023 3.64192 3.68758 3.75498 3.78175 3.81506 3.86182 4.00232 4.09482 4.13351 4.19686 4.22585 4.35253 4.41028 4.46290 4.55209 4.61595 4.63593 4.69603 4.79601 4.81547 4.91562 4.93363 4.98391 5.12190 5.28397 5.37698 5.43038 5.45093 5.70476 6.32488 6.41590 6.56968 6.58202 7.11269 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.070 4.070 3 Si 0.694 3.306 4 C -0.081 4.081 5 C -0.157 4.157 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.106 4.106 12 C -0.137 4.137 13 C 0.517 3.483 14 O -0.530 6.530 15 N -0.717 5.717 16 C 0.120 3.880 17 H 0.111 0.889 18 C -0.135 4.135 19 C 0.075 3.925 20 H 0.080 0.920 21 O -0.559 6.559 22 C -0.181 4.181 23 C -0.126 4.126 24 H 0.380 0.620 25 H 0.115 0.885 26 H -0.255 1.255 27 H -0.258 1.258 28 H 0.128 0.872 29 H 0.130 0.870 30 H 0.129 0.871 31 H 0.064 0.936 32 H 0.065 0.935 33 H 0.084 0.916 34 H 0.083 0.917 35 H 0.098 0.902 36 H 0.100 0.900 37 H 0.401 0.599 38 H 0.080 0.920 39 H 0.105 0.895 40 H 0.381 0.619 41 H 0.100 0.900 42 H 0.073 0.927 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.896 2.584 -6.407 7.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.596 3.404 4 C -0.081 4.081 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.015 4.015 11 C -0.144 4.144 12 C -0.177 4.177 13 C 0.304 3.696 14 O -0.406 6.406 15 N -0.369 5.369 16 C 0.014 3.986 17 H 0.129 0.871 18 C -0.173 4.173 19 C 0.016 3.984 20 H 0.098 0.902 21 O -0.364 6.364 22 C -0.220 4.220 23 C -0.145 4.145 24 H 0.227 0.773 25 H 0.133 0.867 26 H -0.180 1.180 27 H -0.183 1.183 28 H 0.146 0.854 29 H 0.148 0.852 30 H 0.147 0.853 31 H 0.082 0.918 32 H 0.083 0.917 33 H 0.103 0.897 34 H 0.102 0.898 35 H 0.117 0.883 36 H 0.118 0.882 37 H 0.236 0.764 38 H 0.099 0.901 39 H 0.124 0.876 40 H 0.228 0.772 41 H 0.119 0.881 42 H 0.092 0.908 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.202 2.441 -4.840 6.295 hybrid contribution 1.272 -0.507 -0.341 1.411 sum 4.474 1.934 -5.181 7.113 Atomic orbital electron populations 1.86515 1.16915 1.81720 1.49221 1.25123 0.85391 1.10244 0.97343 0.94623 0.80902 0.77835 0.87073 1.20146 0.97468 0.93910 0.96580 1.20924 1.01089 0.99844 0.95603 1.20908 0.97846 0.93722 0.96675 1.21309 1.03484 0.96495 1.01142 1.19027 0.94378 0.83473 0.94441 1.86085 1.70905 1.22423 1.43058 1.22818 0.98552 0.93895 0.86281 1.21234 1.03095 0.92324 0.97714 1.21530 1.03047 0.92737 1.00420 1.20609 0.79823 0.87922 0.81291 1.90762 1.36911 1.74941 1.37945 1.45725 1.54051 1.11646 1.25481 1.21640 0.98793 0.80471 0.97698 0.87094 1.23452 0.96305 1.01343 0.96210 1.23440 0.96636 0.85810 0.92507 0.90207 1.86533 1.34665 1.34862 1.80369 1.24160 0.99675 1.00620 0.97559 1.20275 1.03101 0.93995 0.97102 0.77317 0.86733 1.17981 1.18312 0.85447 0.85221 0.85277 0.91809 0.91709 0.89698 0.89791 0.88324 0.88217 0.76399 0.90130 0.87611 0.77174 0.88141 0.90811 0.84781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.47 12.77 -35.23 -0.45 -0.92 16 2 C -0.07 -0.03 2.82 36.01 0.10 0.08 16 3 Si 0.69 -0.59 29.79 -169.99 -5.06 -5.65 16 4 C -0.08 -0.08 5.39 -104.65 -0.56 -0.64 16 5 C -0.16 0.02 8.67 -39.56 -0.34 -0.32 16 6 C -0.07 0.03 10.04 -39.61 -0.40 -0.36 16 7 C -0.21 -0.04 9.04 -39.43 -0.36 -0.39 16 8 C 0.13 0.27 6.69 -39.21 -0.26 0.01 16 9 O -0.31 -0.72 10.14 -19.41 -0.20 -0.91 16 10 C 0.06 -0.07 4.74 37.16 0.18 0.11 16 11 C -0.11 0.07 4.87 -26.73 -0.13 -0.06 16 12 C -0.14 0.43 5.70 -27.88 -0.16 0.27 16 13 C 0.52 0.09 7.83 -10.98 -0.09 0.01 16 14 O -0.53 -2.62 15.58 5.56 0.09 -2.53 16 15 N -0.72 1.46 5.27 -53.02 -0.28 1.18 16 16 C 0.12 -0.09 4.32 -67.12 -0.29 -0.38 16 17 H 0.11 0.13 7.46 -51.93 -0.39 -0.26 16 18 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 19 C 0.08 -0.13 5.09 -25.92 -0.13 -0.26 16 20 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 21 O -0.56 0.08 13.67 -35.23 -0.48 -0.40 16 22 C -0.18 0.19 7.71 -25.92 -0.20 -0.01 16 23 C -0.13 -0.29 9.55 -39.43 -0.38 -0.67 16 24 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 25 H 0.12 0.10 7.96 -51.93 -0.41 -0.32 16 26 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 27 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 28 H 0.13 -0.26 4.87 -52.48 -0.26 -0.51 16 29 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 30 H 0.13 -0.25 6.30 -52.49 -0.33 -0.58 16 31 H 0.06 -0.16 7.65 -51.93 -0.40 -0.56 16 32 H 0.06 -0.17 7.67 -51.93 -0.40 -0.57 16 33 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 34 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 35 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 36 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 37 H 0.40 -1.99 8.70 -40.82 -0.36 -2.35 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 39 H 0.11 -0.09 8.14 -51.92 -0.42 -0.51 16 40 H 0.38 -1.53 9.12 45.56 0.42 -1.11 16 41 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.07 -0.07 8.14 -51.92 -0.42 -0.49 16 43 H 0.13 0.36 8.06 -52.48 -0.42 -0.06 16 LS Contribution 359.30 15.07 5.41 5.41 Total: 0.00 -10.04 359.30 -9.76 -19.80 By element: Atomic # 1 Polarization: -7.78 SS G_CDS: -5.57 Total: -13.35 kcal Atomic # 6 Polarization: 0.60 SS G_CDS: -3.22 Total: -2.62 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -0.28 Total: 1.18 kcal Atomic # 8 Polarization: -3.73 SS G_CDS: -1.04 Total: -4.77 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.06 Total: -5.65 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -10.04 -9.76 -19.80 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_4549616.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.534 kcal (2) G-P(sol) polarization free energy of solvation -10.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.798 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds