Wall clock time and date at job start Sat Mar 6 2021 19:39:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47030 * 2 1 4 4 C 1.50696 * 109.47278 * 239.99675 * 2 1 3 5 5 C 1.38268 * 119.94238 * 119.72540 * 4 2 1 6 6 C 1.38148 * 120.05255 * 179.72402 * 5 4 2 7 7 C 1.38731 * 119.94303 * 0.55323 * 6 5 4 8 8 O 1.35900 * 120.05280 * 179.74897 * 7 6 5 9 9 C 1.42897 * 117.00207 * 359.97334 * 8 7 6 10 10 C 1.50703 * 109.47158 * 180.02562 * 9 8 7 11 11 C 1.36414 * 125.80503 * 89.71879 * 10 9 8 12 12 C 1.47383 * 127.19091 * 359.95894 * 11 10 9 13 13 O 1.21613 * 119.99501 * 0.02562 * 12 11 10 14 14 N 1.34768 * 120.00052 * 179.97438 * 12 11 10 15 15 C 1.46496 * 120.00145 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.84756 * 25.32994 * 15 14 12 17 17 C 1.53776 * 113.61646 * 156.53166 * 15 14 12 18 18 C 1.53777 * 87.08344 * 139.98100 * 17 15 14 19 19 H 1.09005 * 113.61647 * 219.93527 * 18 17 15 20 20 O 1.42901 * 113.61528 * 89.11628 * 18 17 15 21 21 C 1.53791 * 113.61418 * 254.13971 * 15 14 12 22 22 C 1.47016 * 105.61737 * 179.86811 * 11 10 9 23 23 C 1.34178 * 105.95336 * 0.39130 * 22 11 10 24 24 O 1.33651 * 125.79562 * 270.02514 * 10 9 8 25 25 C 1.38728 * 119.89302 * 359.72113 * 7 6 5 26 26 C 1.38154 * 119.93919 * 0.02562 * 25 7 6 27 27 H 0.96700 * 114.00022 * 300.00827 * 1 2 3 28 28 H 1.08997 * 109.46978 * 119.99554 * 2 1 3 29 29 H 1.48506 * 110.00048 * 178.68200 * 3 2 1 30 30 H 1.48502 * 109.99996 * 299.99525 * 3 2 1 31 31 H 1.07998 * 119.97204 * 359.97438 * 5 4 2 32 32 H 1.08003 * 120.02568 * 180.27470 * 6 5 4 33 33 H 1.08998 * 109.47221 * 300.00355 * 9 8 7 34 34 H 1.09003 * 109.47106 * 60.00320 * 9 8 7 35 35 H 0.97003 * 120.00055 * 0.02562 * 14 12 11 36 36 H 1.09005 * 113.61585 * 254.53206 * 17 15 14 37 37 H 1.08999 * 113.61482 * 25.43371 * 17 15 14 38 38 H 0.96702 * 113.99746 * 180.02562 * 20 18 17 39 39 H 1.09003 * 113.61052 * 334.56721 * 21 15 14 40 40 H 1.08994 * 113.61319 * 105.46768 * 21 15 14 41 41 H 1.08004 * 127.02521 * 180.12300 * 22 11 10 42 42 H 1.07998 * 125.44021 * 179.79775 * 23 22 11 43 43 H 1.07990 * 120.03336 * 179.97438 * 25 7 6 44 44 H 1.07997 * 119.96817 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7216 -0.0357 -2.1426 6 6 3.1880 -0.6864 -3.2684 7 6 2.8536 -2.0146 -3.4891 8 8 3.3070 -2.6554 -4.5984 9 6 4.1235 -1.9003 -5.4957 10 6 4.5284 -2.7691 -6.6585 11 6 3.8367 -2.9141 -7.8254 12 6 2.5662 -2.2647 -8.1945 13 8 2.0237 -1.5038 -7.4161 14 7 2.0062 -2.5132 -9.3948 15 6 0.7436 -1.8673 -9.7619 16 1 0.5805 -0.9270 -9.2354 17 6 0.5200 -1.7701 -11.2802 18 6 -0.9523 -2.1195 -11.0066 19 1 -1.3824 -2.8026 -11.7391 20 8 -1.7758 -0.9775 -10.7622 21 6 -0.4675 -2.8143 -9.7211 22 6 4.6247 -3.8517 -8.6387 23 6 5.6903 -4.1813 -7.8929 24 8 5.6233 -3.5331 -6.7195 25 6 2.0559 -2.6877 -2.5752 26 6 1.5963 -2.0340 -1.4482 27 1 -0.3933 0.4418 0.7650 28 1 1.7923 -0.5138 0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5616 2.4679 -1.2086 31 1 2.9776 0.9996 -1.9728 32 1 3.8089 -0.1603 -3.9785 33 1 3.5616 -1.0413 -5.8627 34 1 5.0149 -1.5546 -4.9723 35 1 2.4391 -3.1198 -10.0157 36 1 0.6636 -0.7659 -11.6793 37 1 1.0512 -2.5328 -11.8495 38 1 -2.7029 -1.1910 -10.5890 39 1 -0.2067 -3.8630 -9.8633 40 1 -1.1199 -2.6519 -8.8632 41 1 4.3910 -4.2064 -9.6317 42 1 6.4768 -4.8593 -8.1897 43 1 1.7938 -3.7215 -2.7449 44 1 0.9750 -2.5575 -0.7367 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_4549634.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:35 Heat of formation + Delta-G solvation = -67.849016 kcal Electronic energy + Delta-G solvation = -29585.062943 eV Core-core repulsion = 25244.740980 eV Total energy + Delta-G solvation = -4340.321963 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.134 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -43.74428 -41.18526 -41.08276 -39.52860 -39.01721 -37.17168 -36.26001 -34.42474 -33.46390 -32.80658 -31.92138 -31.40690 -28.03299 -26.86438 -26.21651 -25.80613 -24.02592 -23.72499 -22.28826 -21.98683 -21.36894 -20.57851 -19.39957 -19.14068 -18.46599 -18.33105 -17.58904 -17.21746 -17.14082 -16.88662 -16.65020 -16.60666 -16.20648 -15.93769 -15.57669 -15.46073 -15.35526 -14.88699 -14.57490 -14.42156 -14.15410 -14.00059 -13.89272 -13.71934 -13.64651 -13.54472 -13.30143 -13.24463 -13.02935 -12.36865 -12.29077 -12.02496 -11.88715 -11.75019 -11.53488 -11.04267 -10.96953 -10.80479 -10.25776 -10.08474 -9.94842 -9.85673 -9.09274 -4.92994 0.03614 0.36822 0.40627 0.91938 1.34453 1.49027 1.68327 2.03204 2.12838 2.19799 2.53315 2.72538 2.95647 3.28746 3.36778 3.47817 3.61030 3.61438 3.66190 3.74443 3.76887 3.88182 3.91853 4.02724 4.03976 4.15861 4.30937 4.33173 4.42332 4.45572 4.51487 4.53709 4.57703 4.71959 4.73229 4.74590 4.87643 4.94641 5.00905 5.07838 5.09880 5.24591 5.33707 5.48501 5.58034 5.76501 5.84371 6.36808 6.46557 6.60221 6.69193 7.19950 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.065 4.065 3 Si 0.680 3.320 4 C -0.114 4.114 5 C -0.082 4.082 6 C -0.200 4.200 7 C 0.142 3.858 8 O -0.303 6.303 9 C 0.135 3.865 10 C 0.065 3.935 11 C -0.210 4.210 12 C 0.589 3.411 13 O -0.531 6.531 14 N -0.713 5.713 15 C 0.131 3.869 16 H 0.120 0.880 17 C -0.140 4.140 18 C 0.082 3.918 19 H 0.076 0.924 20 O -0.550 6.550 21 C -0.185 4.185 22 C -0.196 4.196 23 C -0.015 4.015 24 O -0.165 6.165 25 C -0.147 4.147 26 C -0.048 4.048 27 H 0.381 0.619 28 H 0.073 0.927 29 H -0.256 1.256 30 H -0.251 1.251 31 H 0.120 0.880 32 H 0.132 0.868 33 H 0.115 0.885 34 H 0.083 0.917 35 H 0.401 0.599 36 H 0.086 0.914 37 H 0.099 0.901 38 H 0.385 0.615 39 H 0.092 0.908 40 H 0.079 0.921 41 H 0.162 0.838 42 H 0.215 0.785 43 H 0.135 0.865 44 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.932 -2.112 -1.188 2.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.099 4.099 6 C -0.219 4.219 7 C 0.097 3.903 8 O -0.216 6.216 9 C 0.060 3.940 10 C 0.012 3.988 11 C -0.215 4.215 12 C 0.377 3.623 13 O -0.409 6.409 14 N -0.364 5.364 15 C 0.026 3.974 16 H 0.138 0.862 17 C -0.178 4.178 18 C 0.022 3.978 19 H 0.094 0.906 20 O -0.356 6.356 21 C -0.224 4.224 22 C -0.215 4.215 23 C -0.081 4.081 24 O -0.060 6.060 25 C -0.165 4.165 26 C -0.066 4.066 27 H 0.229 0.771 28 H 0.091 0.909 29 H -0.181 1.181 30 H -0.175 1.175 31 H 0.138 0.862 32 H 0.149 0.851 33 H 0.133 0.867 34 H 0.101 0.899 35 H 0.236 0.764 36 H 0.105 0.895 37 H 0.117 0.883 38 H 0.233 0.767 39 H 0.110 0.890 40 H 0.098 0.902 41 H 0.179 0.821 42 H 0.231 0.769 43 H 0.153 0.847 44 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.871 -1.179 -1.550 2.700 hybrid contribution -0.097 -1.196 -0.814 1.450 sum 1.774 -2.374 -2.364 3.791 Atomic orbital electron populations 1.86503 1.17339 1.81745 1.49631 1.24596 0.85592 1.10066 0.97355 0.95479 0.80598 0.78301 0.87474 1.19241 1.00881 0.94817 0.96497 1.20630 0.97296 0.98466 0.93532 1.21120 1.06084 0.94316 1.00339 1.18918 0.94114 0.90968 0.86270 1.86081 1.64723 1.39578 1.31252 1.21107 0.95148 0.91543 0.86161 1.21935 0.86273 0.94917 0.95723 1.21247 0.98560 1.05151 0.96525 1.17226 0.82896 0.80525 0.81676 1.90812 1.63359 1.36528 1.50214 1.45774 1.24748 1.48317 1.17527 1.22535 0.81909 0.97546 0.95390 0.86171 1.23453 0.94475 1.03997 0.95915 1.22512 0.91443 0.87834 0.96004 0.90598 1.86472 1.23953 1.31740 1.93478 1.24205 0.98633 0.99902 0.99629 1.22887 0.95844 1.01110 1.01679 1.24066 1.01451 0.99156 0.83442 1.83800 1.39171 1.46617 1.36433 1.20495 1.00548 1.01187 0.94284 1.20802 0.96434 0.93368 0.96001 0.77134 0.90870 1.18075 1.17541 0.86243 0.85053 0.86696 0.89878 0.76414 0.89533 0.88253 0.76656 0.88960 0.90179 0.82063 0.76884 0.84669 0.84640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.69 12.74 -35.23 -0.45 -1.14 16 2 C -0.07 -0.07 2.81 36.00 0.10 0.03 16 3 Si 0.68 0.01 29.78 -169.99 -5.06 -5.05 16 4 C -0.11 -0.43 5.42 -104.60 -0.57 -1.00 16 5 C -0.08 -0.34 8.66 -39.60 -0.34 -0.68 16 6 C -0.20 -0.80 9.04 -39.43 -0.36 -1.16 16 7 C 0.14 0.69 6.69 -39.22 -0.26 0.42 16 8 O -0.30 -1.54 10.12 -19.43 -0.20 -1.74 16 9 C 0.14 0.41 4.73 36.01 0.17 0.58 16 10 C 0.06 0.20 7.00 -34.96 -0.24 -0.05 16 11 C -0.21 -0.53 6.31 -103.28 -0.65 -1.18 16 12 C 0.59 2.22 7.81 -12.54 -0.10 2.12 16 13 O -0.53 -3.82 14.47 5.27 0.08 -3.74 16 14 N -0.71 -0.48 5.36 -54.11 -0.29 -0.77 16 15 C 0.13 0.14 4.15 -67.12 -0.28 -0.14 16 16 H 0.12 0.46 7.50 -51.93 -0.39 0.07 16 17 C -0.14 0.13 7.66 -25.92 -0.20 -0.07 16 18 C 0.08 -0.06 5.28 -25.83 -0.14 -0.20 16 19 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 20 O -0.55 -0.41 13.59 -35.23 -0.48 -0.89 16 21 C -0.18 0.01 7.72 -25.82 -0.20 -0.19 16 22 C -0.20 0.14 10.60 -37.46 -0.40 -0.26 16 23 C -0.01 0.01 12.03 29.30 0.35 0.37 16 24 O -0.17 -0.33 10.52 7.64 0.08 -0.25 16 25 C -0.15 -0.59 9.99 -39.43 -0.39 -0.99 16 26 C -0.05 -0.17 9.60 -39.60 -0.38 -0.55 16 27 H 0.38 -1.50 8.74 45.56 0.40 -1.10 16 28 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 29 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 30 H -0.25 -0.86 7.11 56.52 0.40 -0.46 16 31 H 0.12 0.39 4.87 -52.49 -0.26 0.13 16 32 H 0.13 0.26 6.30 -52.48 -0.33 -0.07 16 33 H 0.12 0.41 6.02 -51.93 -0.31 0.10 16 34 H 0.08 0.07 7.66 -51.93 -0.40 -0.33 16 35 H 0.40 -0.90 7.88 -40.82 -0.32 -1.23 16 36 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.10 -0.31 8.11 -51.93 -0.42 -0.73 16 38 H 0.39 -1.25 9.12 45.56 0.42 -0.84 16 39 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 41 H 0.16 -0.62 7.74 -52.48 -0.41 -1.03 16 42 H 0.21 -1.07 8.06 -52.49 -0.42 -1.49 16 43 H 0.14 0.36 8.06 -52.49 -0.42 -0.06 16 44 H 0.14 0.24 8.06 -52.49 -0.42 -0.18 16 LS Contribution 374.96 15.07 5.65 5.65 Total: 0.00 -11.46 374.96 -9.15 -20.61 By element: Atomic # 1 Polarization: -5.16 SS G_CDS: -4.59 Total: -9.75 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -3.88 Total: -2.93 kcal Atomic # 7 Polarization: -0.48 SS G_CDS: -0.29 Total: -0.77 kcal Atomic # 8 Polarization: -6.80 SS G_CDS: -0.97 Total: -7.76 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: -5.06 Total: -5.05 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -11.46 -9.15 -20.61 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_4549634.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.244 kcal (2) G-P(sol) polarization free energy of solvation -11.460 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.146 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.605 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds