Wall clock time and date at job start Sat Mar 6 2021 19:39:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.35993 * 116.99998 * 2 1 4 4 C 1.39159 * 120.07097 * 180.02562 * 3 2 1 5 5 O 1.35990 * 120.07179 * 0.02562 * 4 3 2 6 6 C 1.42906 * 116.99830 * 179.72750 * 5 4 3 7 7 C 1.50703 * 109.46830 * 179.97438 * 6 5 4 8 8 O 1.21273 * 120.00093 * 0.02562 * 7 6 5 9 9 N 1.34776 * 119.99270 * 179.97438 * 7 6 5 10 10 C 1.46504 * 119.99629 * 180.02562 * 9 7 6 11 11 H 1.09002 * 112.84804 * 23.80214 * 10 9 7 12 12 C 1.53780 * 113.61593 * 154.99696 * 10 9 7 13 13 C 1.53781 * 87.07900 * 89.20001 * 12 10 9 14 14 H 1.08993 * 113.61848 * 270.80100 * 13 12 10 15 15 O 1.42905 * 113.61237 * 139.97968 * 13 12 10 16 16 C 1.53777 * 113.69320 * 252.53556 * 10 9 7 17 17 C 1.38560 * 119.85045 * 179.73018 * 4 3 2 18 18 C 1.38239 * 120.00305 * 0.27332 * 17 4 3 19 19 N 1.48002 * 119.92795 * 180.02562 * 18 17 4 20 20 O 1.21800 * 120.00254 * 359.97438 * 19 18 17 21 21 O 1.21811 * 120.00070 * 180.02562 * 19 18 17 22 22 C 1.38252 * 120.14716 * 0.02562 * 18 17 4 23 23 C 1.50701 * 119.92705 * 180.02562 * 22 18 17 24 24 O 1.42895 * 109.47369 * 74.99856 * 23 22 18 25 25 Si 1.86299 * 109.46784 * 194.99728 * 23 22 18 26 26 C 1.38247 * 120.14687 * 359.97438 * 22 18 17 27 27 H 1.08993 * 109.47138 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46943 * 299.99991 * 1 2 3 29 29 H 1.09000 * 109.46657 * 59.99383 * 1 2 3 30 30 H 1.09004 * 109.46785 * 59.99990 * 6 5 4 31 31 H 1.08997 * 109.46954 * 299.99797 * 6 5 4 32 32 H 0.96993 * 120.00620 * 0.02562 * 9 7 6 33 33 H 1.09000 * 113.61269 * 334.65506 * 12 10 9 34 34 H 1.09003 * 113.61563 * 203.74810 * 12 10 9 35 35 H 0.96705 * 113.99788 * 180.02562 * 15 13 12 36 36 H 1.08993 * 113.61687 * 156.32232 * 16 10 9 37 37 H 1.09001 * 113.60867 * 25.41906 * 16 10 9 38 38 H 1.08000 * 119.99664 * 180.25427 * 17 4 3 39 39 H 1.08998 * 109.47330 * 314.99294 * 23 22 18 40 40 H 0.96702 * 113.99991 * 59.99851 * 24 23 22 41 41 H 1.48499 * 110.00315 * 58.68137 * 25 23 22 42 42 H 1.48509 * 109.99919 * 179.97438 * 25 23 22 43 43 H 1.07997 * 120.00430 * 180.02562 * 26 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4361 1.2863 -0.0005 5 8 4.1796 0.1476 -0.0016 6 6 5.6004 0.3006 -0.0081 7 6 6.2519 -1.0584 -0.0077 8 8 5.5670 -2.0592 -0.0028 9 7 7.5957 -1.1613 -0.0139 10 6 8.2291 -2.4824 -0.0140 11 1 7.5814 -3.2622 -0.4147 12 6 9.6440 -2.4870 -0.6162 13 6 10.1623 -2.1821 0.7991 14 1 10.2215 -1.1170 1.0224 15 8 11.3594 -2.8868 1.1345 16 6 8.8837 -2.8540 1.3269 17 6 4.0604 2.5232 -0.0062 18 6 3.3031 3.6797 -0.0056 19 7 3.9716 5.0001 -0.0122 20 8 5.1878 5.0670 -0.0177 21 8 3.3056 6.0201 -0.0112 22 6 1.9226 3.6057 0.0012 23 6 1.1018 4.8696 0.0013 24 8 1.1287 5.4551 -1.3020 25 14 -0.6571 4.4678 0.4654 26 6 1.2933 2.3748 0.0069 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3632 0.5139 -0.8899 30 1 5.9105 0.8521 0.8795 31 1 5.9027 0.8485 -0.9005 32 1 8.1435 -0.3609 -0.0182 33 1 9.8182 -1.6803 -1.3282 34 1 9.9544 -3.4611 -0.9945 35 1 11.6901 -2.6995 2.0238 36 1 8.9861 -3.9282 1.4800 37 1 8.4439 -2.3434 2.1837 38 1 5.1387 2.5838 -0.0108 39 1 1.5168 5.5723 0.7239 40 1 0.7735 4.8843 -1.9970 41 1 -0.6956 3.8292 1.8055 42 1 -1.4768 5.7061 0.4697 43 1 0.2147 2.3196 0.0118 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_4549636.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:38 Heat of formation + Delta-G solvation = -109.710265 kcal Electronic energy + Delta-G solvation = -31841.776990 eV Core-core repulsion = 27053.301773 eV Total energy + Delta-G solvation = -4788.475217 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.128 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.26249 -42.16314 -41.48600 -40.29058 -39.42081 -39.12062 -37.58501 -37.09908 -36.49032 -34.07512 -32.73206 -32.57022 -29.99614 -29.01372 -27.89258 -26.95481 -26.00004 -25.30868 -23.94026 -23.22478 -22.19101 -20.84661 -20.65252 -19.72648 -19.60419 -19.03498 -18.59211 -18.49315 -18.33016 -17.87755 -17.68497 -17.46332 -17.05367 -16.90953 -16.50636 -16.35864 -16.15170 -15.86614 -15.58241 -15.27505 -15.10616 -14.85537 -14.43558 -14.13988 -13.99212 -13.67165 -13.60208 -13.54946 -13.17141 -12.95511 -12.75683 -12.63131 -12.57918 -12.52582 -12.30392 -12.22136 -11.96708 -11.69615 -11.68082 -11.10644 -10.92777 -10.60682 -10.55628 -10.33043 -9.56774 -5.29173 -1.25336 -0.54159 0.29284 0.40540 1.00992 1.05884 1.28800 1.42524 1.68677 1.81101 1.83597 2.14584 2.87712 3.03763 3.07124 3.16140 3.25431 3.29375 3.36788 3.42988 3.45310 3.59257 3.61157 3.69320 3.77104 3.78765 3.82803 3.92360 3.94375 4.13523 4.22284 4.36362 4.40354 4.51856 4.57414 4.61596 4.63974 4.70982 4.77209 4.86728 5.28245 5.41078 5.45017 5.88496 6.14119 6.42135 6.55046 6.75738 6.90700 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.264 6.264 6 C 0.032 3.968 7 C 0.521 3.479 8 O -0.504 6.504 9 N -0.711 5.711 10 C 0.122 3.878 11 H 0.114 0.886 12 C -0.134 4.134 13 C 0.075 3.925 14 H 0.081 0.919 15 O -0.558 6.558 16 C -0.181 4.181 17 C -0.118 4.118 18 C -0.025 4.025 19 N 0.032 4.968 20 O -0.174 6.174 21 O -0.129 6.129 22 C -0.042 4.042 23 C -0.074 4.074 24 O -0.515 6.515 25 Si 0.675 3.325 26 C -0.177 4.177 27 H 0.114 0.886 28 H 0.064 0.936 29 H 0.068 0.932 30 H 0.100 0.900 31 H 0.102 0.898 32 H 0.404 0.596 33 H 0.082 0.918 34 H 0.107 0.893 35 H 0.381 0.619 36 H 0.102 0.898 37 H 0.074 0.926 38 H 0.166 0.834 39 H 0.139 0.861 40 H 0.374 0.626 41 H -0.252 1.252 42 H -0.242 1.242 43 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.620 -2.515 -0.288 3.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.196 6.196 3 C 0.123 3.877 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.047 4.047 7 C 0.306 3.694 8 O -0.377 6.377 9 N -0.365 5.365 10 C 0.017 3.983 11 H 0.132 0.868 12 C -0.173 4.173 13 C 0.016 3.984 14 H 0.099 0.901 15 O -0.364 6.364 16 C -0.220 4.220 17 C -0.138 4.138 18 C -0.109 4.109 19 N 0.551 4.449 20 O -0.384 6.384 21 O -0.349 6.349 22 C -0.045 4.045 23 C -0.184 4.184 24 O -0.319 6.319 25 Si 0.575 3.425 26 C -0.195 4.195 27 H 0.132 0.868 28 H 0.083 0.917 29 H 0.087 0.913 30 H 0.118 0.882 31 H 0.119 0.881 32 H 0.239 0.761 33 H 0.100 0.900 34 H 0.126 0.874 35 H 0.229 0.771 36 H 0.120 0.880 37 H 0.093 0.907 38 H 0.184 0.816 39 H 0.156 0.844 40 H 0.220 0.780 41 H -0.177 1.177 42 H -0.166 1.166 43 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.888 -3.927 0.014 4.875 hybrid contribution 1.174 1.456 0.835 2.048 sum -1.715 -2.472 0.849 3.126 Atomic orbital electron populations 1.23424 0.76767 1.05799 1.02187 1.86347 1.22518 1.24207 1.86478 1.18451 0.89030 0.85912 0.94355 1.17843 0.88415 0.85297 1.02282 1.86334 1.16777 1.26061 1.88455 1.22649 0.80302 0.97031 1.04707 1.19845 0.82458 0.90239 0.76892 1.90813 1.62495 1.37828 1.46563 1.45491 1.05790 1.09105 1.76115 1.21675 0.93869 0.85365 0.97409 0.86844 1.23465 0.93135 1.04616 0.96035 1.23447 0.83657 0.95054 0.96253 0.90093 1.86538 1.42277 1.69767 1.37794 1.24171 0.96869 1.03057 0.97863 1.20797 1.02192 0.88973 1.01820 1.20396 0.91984 0.83144 1.15407 1.43383 1.00982 1.02617 0.97918 1.94540 0.95800 1.93721 1.54383 1.94580 1.64446 1.24058 1.51861 1.20106 0.91603 0.97068 0.95676 1.25469 1.08470 0.93285 0.91203 1.86712 1.86490 1.43425 1.15247 0.95574 0.76366 0.85266 0.85333 1.20904 1.00516 0.89585 1.08539 0.86761 0.91725 0.91342 0.88200 0.88061 0.76137 0.89973 0.87417 0.77108 0.87952 0.90714 0.81642 0.84406 0.77964 1.17650 1.16589 0.82002 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 0.00 10.28 -34.22 -0.35 -0.35 16 3 C 0.17 -0.06 6.70 -39.12 -0.26 -0.32 16 4 C 0.11 0.02 6.70 -39.12 -0.26 -0.24 16 5 O -0.26 -0.35 9.45 -47.34 -0.45 -0.80 16 6 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 7 C 0.52 0.13 7.91 -10.98 -0.09 0.04 16 8 O -0.50 -2.65 16.10 -14.35 -0.23 -2.88 16 9 N -0.71 1.82 5.27 -53.02 -0.28 1.54 16 10 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 11 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 12 C -0.13 0.29 7.66 -25.92 -0.20 0.09 16 13 C 0.08 -0.17 5.09 -25.92 -0.13 -0.30 16 14 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 15 O -0.56 0.30 13.67 -35.23 -0.48 -0.18 16 16 C -0.18 0.30 7.71 -25.92 -0.20 0.10 16 17 C -0.12 0.04 8.54 -39.46 -0.34 -0.30 16 18 C -0.03 -0.03 6.85 -79.95 -0.55 -0.58 16 19 N 0.03 0.13 4.45 33.96 0.15 0.28 16 20 O -0.17 -0.81 18.44 -29.46 -0.54 -1.35 16 21 O -0.13 -0.68 14.62 -35.96 -0.53 -1.21 16 22 C -0.04 0.01 5.26 -104.61 -0.55 -0.54 16 23 C -0.07 0.02 1.74 36.01 0.06 0.08 16 24 O -0.51 -0.10 11.80 -55.46 -0.65 -0.76 16 25 Si 0.67 -1.57 29.91 -169.99 -5.08 -6.66 16 26 C -0.18 0.38 7.65 -39.46 -0.30 0.08 16 27 H 0.11 -0.60 8.14 -51.93 -0.42 -1.03 16 28 H 0.06 -0.36 7.65 -51.93 -0.40 -0.75 16 29 H 0.07 -0.44 7.68 -51.93 -0.40 -0.84 16 30 H 0.10 -0.47 7.66 -51.93 -0.40 -0.87 16 31 H 0.10 -0.48 7.66 -51.93 -0.40 -0.88 16 32 H 0.40 -2.29 8.70 -40.82 -0.36 -2.64 16 33 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 34 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.38 -1.65 9.12 45.56 0.42 -1.24 16 36 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 38 H 0.17 -0.40 5.85 -52.49 -0.31 -0.70 16 39 H 0.14 0.20 6.07 -51.93 -0.32 -0.11 16 40 H 0.37 -1.63 8.70 45.56 0.40 -1.23 16 41 H -0.25 0.08 7.11 56.52 0.40 0.48 16 42 H -0.24 -0.26 7.11 56.52 0.40 0.15 16 43 H 0.16 -0.84 3.36 -52.49 -0.18 -1.01 16 LS Contribution 368.13 15.07 5.55 5.55 Total: 0.00 -13.32 368.13 -8.88 -22.20 By element: Atomic # 1 Polarization: -10.04 SS G_CDS: -4.05 Total: -14.10 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -1.93 Total: -1.29 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -0.13 Total: 1.82 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -3.24 Total: -7.52 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.08 Total: -6.66 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -13.32 -8.88 -22.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_4549636.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.511 kcal (2) G-P(sol) polarization free energy of solvation -13.320 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.200 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds