Wall clock time and date at job start Sat Mar 6 2021 19:39:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35975 * 117.00286 * 2 1 4 4 C 1.38684 * 120.00523 * 179.97438 * 3 2 1 5 5 C 1.38148 * 120.00153 * 180.02562 * 4 3 2 6 6 C 1.50697 * 120.00033 * 180.02562 * 5 4 3 7 7 O 1.42894 * 109.47438 * 104.97828 * 6 5 4 8 8 Si 1.86304 * 109.46897 * 344.97392 * 6 5 4 9 9 C 1.38674 * 120.00137 * 0.02562 * 5 4 3 10 10 O 1.35984 * 119.99945 * 180.02562 * 9 5 4 11 11 C 1.42908 * 116.99896 * 179.97438 * 10 9 5 12 12 C 1.50698 * 109.46887 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00472 * 0.02562 * 12 11 10 14 14 N 1.34777 * 119.99538 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99665 * 179.72653 * 14 12 11 16 16 H 1.09002 * 112.85201 * 24.08188 * 15 14 12 17 17 C 1.53784 * 113.61491 * 155.28109 * 15 14 12 18 18 C 1.53783 * 87.08338 * 139.98310 * 17 15 14 19 19 H 1.09004 * 113.61283 * 220.02107 * 18 17 15 20 20 O 1.42891 * 113.61889 * 89.11578 * 18 17 15 21 21 C 1.53780 * 87.07825 * 334.56565 * 18 17 15 22 22 C 1.38718 * 119.99956 * 0.27231 * 9 5 4 23 23 C 1.38110 * 119.99816 * 359.44979 * 22 9 5 24 24 H 1.09007 * 109.46843 * 180.02562 * 1 2 3 25 25 H 1.08996 * 109.47513 * 300.00023 * 1 2 3 26 26 H 1.08997 * 109.46803 * 60.00470 * 1 2 3 27 27 H 1.08001 * 119.99169 * 0.02562 * 4 3 2 28 28 H 1.09003 * 109.47272 * 224.98181 * 6 5 4 29 29 H 0.96694 * 114.00392 * 60.00353 * 7 6 5 30 30 H 1.48503 * 110.00096 * 178.68193 * 8 6 5 31 31 H 1.48494 * 110.00339 * 300.00491 * 8 6 5 32 32 H 1.09003 * 109.46467 * 60.00362 * 11 10 9 33 33 H 1.08993 * 109.47113 * 300.00627 * 11 10 9 34 34 H 0.97001 * 120.00485 * 0.02562 * 14 12 11 35 35 H 1.09000 * 113.61044 * 254.52540 * 17 15 14 36 36 H 1.08999 * 113.61555 * 25.34324 * 17 15 14 37 37 H 0.96700 * 114.00426 * 180.02562 * 20 18 17 38 38 H 1.08998 * 113.61772 * 270.88604 * 21 18 17 39 39 H 1.09001 * 113.61751 * 139.98662 * 21 18 17 40 40 H 1.08004 * 120.00288 * 179.70183 * 22 9 5 41 41 H 1.08000 * 120.00175 * 180.29734 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2115 0.0000 4 6 3.4313 1.2842 0.0005 5 6 4.0585 2.5151 0.0011 6 6 5.5634 2.5940 0.0011 7 8 6.0208 2.9672 -1.3002 8 14 6.2723 0.9321 0.4557 9 6 3.3032 3.6781 0.0016 10 8 3.9206 4.8897 0.0016 11 6 3.0806 6.0459 0.0016 12 6 3.9348 7.2873 0.0022 13 8 5.1439 7.1916 0.0022 14 7 3.3551 8.5041 0.0029 15 6 4.1855 9.7110 0.0095 16 1 5.1827 9.5410 -0.3965 17 6 3.4828 10.9455 -0.5795 18 6 4.1371 11.7592 0.5495 19 1 3.4801 12.5148 0.9804 20 8 5.4277 12.2715 0.2121 21 6 4.1852 10.4516 1.3573 22 6 1.9179 3.6055 0.0073 23 6 1.2909 2.3749 0.0010 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 4.0194 0.3783 0.0005 28 1 5.8882 3.3386 0.7278 29 1 5.6903 3.8241 -1.6026 30 1 7.7560 0.9882 0.4283 31 1 5.8040 0.5326 1.8070 32 1 2.4514 6.0377 0.8917 33 1 2.4513 6.0377 -0.8883 34 1 2.3882 8.5807 0.0033 35 1 3.8368 11.2161 -1.5743 36 1 2.3956 10.9016 -0.5145 37 1 5.8445 12.7838 0.9184 38 1 3.2901 10.2733 1.9532 39 1 5.1061 10.3234 1.9262 40 1 1.3297 4.5113 0.0126 41 1 0.2124 2.3184 0.0006 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_4974302.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:53 Heat of formation + Delta-G solvation = -125.128087 kcal Electronic energy + Delta-G solvation = -25481.921348 eV Core-core repulsion = 21523.793999 eV Total energy + Delta-G solvation = -3958.127349 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.85595 -41.25404 -40.24852 -39.45680 -37.97879 -36.83438 -36.32236 -34.06729 -32.77490 -31.08732 -29.56263 -28.09829 -26.95033 -26.48678 -25.47154 -23.60250 -22.39020 -21.76580 -21.04795 -19.54974 -18.86608 -18.75329 -18.23794 -17.86840 -17.57754 -17.37135 -17.13662 -16.70012 -16.29058 -15.99369 -15.77166 -15.53153 -15.36860 -15.16033 -14.70964 -14.38742 -14.12222 -14.03184 -13.75109 -13.65836 -13.61568 -13.46286 -13.28529 -13.07124 -12.66051 -12.38297 -12.25046 -11.85917 -11.61155 -11.51953 -11.15706 -11.06348 -10.96187 -10.82758 -10.19915 -10.06872 -8.81879 -4.73492 0.07783 0.35106 1.38279 1.41146 1.54649 1.79751 2.15478 2.25840 2.50303 2.56549 2.88243 3.26721 3.40002 3.52429 3.54916 3.63071 3.65642 3.73621 3.83084 3.96078 3.96461 4.08352 4.12037 4.12785 4.17422 4.34035 4.38289 4.42347 4.44273 4.53451 4.64076 4.65318 4.77515 4.85633 4.95951 5.03211 5.11075 5.18689 5.33125 5.41060 6.06874 6.27950 6.38710 6.54041 6.75671 7.02970 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.103 3.897 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.744 3.256 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.516 3.484 13 O -0.510 6.510 14 N -0.719 5.719 15 C 0.131 3.869 16 H 0.122 0.878 17 C -0.140 4.140 18 C 0.082 3.918 19 H 0.077 0.923 20 O -0.550 6.550 21 C -0.185 4.185 22 C -0.165 4.165 23 C -0.165 4.165 24 H 0.103 0.897 25 H 0.055 0.945 26 H 0.056 0.944 27 H 0.147 0.853 28 H 0.078 0.922 29 H 0.369 0.631 30 H -0.254 1.254 31 H -0.251 1.251 32 H 0.093 0.907 33 H 0.095 0.905 34 H 0.402 0.598 35 H 0.087 0.913 36 H 0.100 0.900 37 H 0.386 0.614 38 H 0.092 0.908 39 H 0.079 0.921 40 H 0.133 0.867 41 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.723 2.583 1.055 9.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.181 4.181 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.301 3.699 13 O -0.383 6.383 14 N -0.372 5.372 15 C 0.027 3.973 16 H 0.140 0.860 17 C -0.178 4.178 18 C 0.022 3.978 19 H 0.094 0.906 20 O -0.356 6.356 21 C -0.225 4.225 22 C -0.184 4.184 23 C -0.184 4.184 24 H 0.121 0.879 25 H 0.074 0.926 26 H 0.075 0.925 27 H 0.164 0.836 28 H 0.096 0.904 29 H 0.216 0.784 30 H -0.179 1.179 31 H -0.175 1.175 32 H 0.111 0.889 33 H 0.113 0.887 34 H 0.237 0.763 35 H 0.105 0.895 36 H 0.118 0.882 37 H 0.234 0.766 38 H 0.111 0.889 39 H 0.098 0.902 40 H 0.151 0.849 41 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -6.854 1.028 1.087 7.015 hybrid contribution -1.506 2.360 0.949 2.956 sum -8.360 3.387 2.036 9.247 Atomic orbital electron populations 1.23100 0.78074 1.04392 1.01313 1.86112 1.21534 1.26173 1.88880 1.18810 0.91909 0.84573 0.98886 1.20059 0.91637 0.96771 1.03605 1.19485 0.96631 0.90031 1.03799 1.25375 0.91478 1.12382 0.88838 1.86703 1.73788 1.41927 1.31445 0.93026 0.79774 0.80238 0.82771 1.18664 0.90833 0.84599 1.00473 1.86119 1.33890 1.11078 1.89258 1.22466 0.93185 0.84150 1.03993 1.20076 0.88878 0.84279 0.76708 1.90796 1.14164 1.86512 1.46877 1.45846 1.10293 1.05085 1.76012 1.22565 0.96528 0.81572 0.96667 0.86031 1.23465 1.00299 0.94062 1.00021 1.22462 0.85599 0.93609 0.96132 0.90551 1.86475 1.31572 1.73246 1.44314 1.24188 1.03694 0.96899 0.97676 1.21016 0.92818 0.98690 1.05883 1.21081 1.00321 0.91509 1.05491 0.87866 0.92637 0.92535 0.83629 0.90423 0.78362 1.17891 1.17531 0.88910 0.88720 0.76345 0.89467 0.88178 0.76600 0.88914 0.90179 0.84924 0.84701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.42 10.50 -19.66 -0.21 -0.63 16 3 C 0.10 0.17 6.69 -39.24 -0.26 -0.09 16 4 C -0.10 -0.21 8.59 -39.45 -0.34 -0.55 16 5 C -0.10 -0.27 5.27 -104.50 -0.55 -0.82 16 6 C -0.07 -0.24 2.33 36.00 0.08 -0.16 16 7 O -0.53 -2.25 12.65 -35.23 -0.45 -2.69 16 8 Si 0.74 1.48 30.17 -169.99 -5.13 -3.65 16 9 C 0.10 0.20 6.62 -39.24 -0.26 -0.06 16 10 O -0.29 -0.69 8.56 -39.60 -0.34 -1.03 16 11 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 12 C 0.52 0.63 7.91 -10.99 -0.09 0.55 16 13 O -0.51 -3.24 16.10 -14.35 -0.23 -3.47 16 14 N -0.72 1.29 5.35 -53.01 -0.28 1.01 16 15 C 0.13 -0.06 4.17 -67.12 -0.28 -0.34 16 16 H 0.12 0.32 7.47 -51.93 -0.39 -0.07 16 17 C -0.14 0.30 7.66 -25.92 -0.20 0.10 16 18 C 0.08 -0.15 5.28 -25.92 -0.14 -0.28 16 19 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 20 O -0.55 0.05 13.59 -35.23 -0.48 -0.43 16 21 C -0.19 0.28 7.71 -25.92 -0.20 0.08 16 22 C -0.17 0.02 9.03 -39.45 -0.36 -0.34 16 23 C -0.17 -0.01 9.03 -39.45 -0.36 -0.36 16 24 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 25 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 26 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 27 H 0.15 0.06 5.13 -52.49 -0.27 -0.21 16 28 H 0.08 0.32 7.82 -51.93 -0.41 -0.08 16 29 H 0.37 1.06 8.60 45.56 0.39 1.45 16 30 H -0.25 -1.20 7.11 56.52 0.40 -0.80 16 31 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 32 H 0.09 -0.34 7.65 -51.93 -0.40 -0.74 16 33 H 0.09 -0.36 7.67 -51.93 -0.40 -0.76 16 34 H 0.40 -2.13 8.73 -40.82 -0.36 -2.49 16 35 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 36 H 0.10 -0.45 8.12 -51.93 -0.42 -0.87 16 37 H 0.39 -1.56 9.12 45.56 0.42 -1.15 16 38 H 0.09 -0.26 8.14 -51.93 -0.42 -0.69 16 39 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.13 -0.41 6.29 -52.48 -0.33 -0.74 16 41 H 0.14 -0.31 6.29 -52.49 -0.33 -0.64 16 LS Contribution 345.38 15.07 5.20 5.20 Total: 0.00 -10.33 345.38 -8.27 -18.60 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -4.60 Total: -11.71 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -1.76 Total: -1.20 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: -0.28 Total: 1.01 kcal Atomic # 8 Polarization: -6.55 SS G_CDS: -1.70 Total: -8.25 kcal Atomic # 14 Polarization: 1.48 SS G_CDS: -5.13 Total: -3.65 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -10.33 -8.27 -18.60 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_4974302.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.531 kcal (2) G-P(sol) polarization free energy of solvation -10.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds