Wall clock time and date at job start Sat Mar 6 2021 19:39:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35975 * 117.00286 * 2 1 4 4 C 1.38684 * 120.00523 * 179.97438 * 3 2 1 5 5 C 1.38148 * 120.00153 * 180.02562 * 4 3 2 6 6 C 1.50697 * 120.00033 * 180.02562 * 5 4 3 7 7 O 1.42894 * 109.47438 * 104.97828 * 6 5 4 8 8 Si 1.86304 * 109.46897 * 344.97392 * 6 5 4 9 9 C 1.38674 * 120.00137 * 0.02562 * 5 4 3 10 10 O 1.35984 * 119.99945 * 180.02562 * 9 5 4 11 11 C 1.42908 * 116.99896 * 179.97438 * 10 9 5 12 12 C 1.50698 * 109.46887 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00472 * 0.02562 * 12 11 10 14 14 N 1.34777 * 119.99538 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99665 * 179.72653 * 14 12 11 16 16 H 1.09002 * 112.85201 * 24.08188 * 15 14 12 17 17 C 1.53784 * 113.61491 * 155.28109 * 15 14 12 18 18 C 1.53783 * 87.08338 * 139.98310 * 17 15 14 19 19 H 1.09004 * 113.61283 * 220.02107 * 18 17 15 20 20 O 1.42891 * 113.61889 * 89.11578 * 18 17 15 21 21 C 1.53780 * 87.07825 * 334.56565 * 18 17 15 22 22 C 1.38718 * 119.99956 * 0.27231 * 9 5 4 23 23 C 1.38110 * 119.99816 * 359.44979 * 22 9 5 24 24 H 1.09007 * 109.46843 * 180.02562 * 1 2 3 25 25 H 1.08996 * 109.47513 * 300.00023 * 1 2 3 26 26 H 1.08997 * 109.46803 * 60.00470 * 1 2 3 27 27 H 1.08001 * 119.99169 * 0.02562 * 4 3 2 28 28 H 1.09003 * 109.47272 * 224.98181 * 6 5 4 29 29 H 0.96694 * 114.00392 * 60.00353 * 7 6 5 30 30 H 1.48503 * 110.00096 * 178.68193 * 8 6 5 31 31 H 1.48494 * 110.00339 * 300.00491 * 8 6 5 32 32 H 1.09003 * 109.46467 * 60.00362 * 11 10 9 33 33 H 1.08993 * 109.47113 * 300.00627 * 11 10 9 34 34 H 0.97001 * 120.00485 * 0.02562 * 14 12 11 35 35 H 1.09000 * 113.61044 * 254.52540 * 17 15 14 36 36 H 1.08999 * 113.61555 * 25.34324 * 17 15 14 37 37 H 0.96700 * 114.00426 * 180.02562 * 20 18 17 38 38 H 1.08998 * 113.61772 * 270.88604 * 21 18 17 39 39 H 1.09001 * 113.61751 * 139.98662 * 21 18 17 40 40 H 1.08004 * 120.00288 * 179.70183 * 22 9 5 41 41 H 1.08000 * 120.00175 * 180.29734 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2115 0.0000 4 6 3.4313 1.2842 0.0005 5 6 4.0585 2.5151 0.0011 6 6 5.5634 2.5940 0.0011 7 8 6.0208 2.9672 -1.3002 8 14 6.2723 0.9321 0.4557 9 6 3.3032 3.6781 0.0016 10 8 3.9206 4.8897 0.0016 11 6 3.0806 6.0459 0.0016 12 6 3.9348 7.2873 0.0022 13 8 5.1439 7.1916 0.0022 14 7 3.3551 8.5041 0.0029 15 6 4.1855 9.7110 0.0095 16 1 5.1827 9.5410 -0.3965 17 6 3.4828 10.9455 -0.5795 18 6 4.1371 11.7592 0.5495 19 1 3.4801 12.5148 0.9804 20 8 5.4277 12.2715 0.2121 21 6 4.1852 10.4516 1.3573 22 6 1.9179 3.6055 0.0073 23 6 1.2909 2.3749 0.0010 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 4.0194 0.3783 0.0005 28 1 5.8882 3.3386 0.7278 29 1 5.6903 3.8241 -1.6026 30 1 7.7560 0.9882 0.4283 31 1 5.8040 0.5326 1.8070 32 1 2.4514 6.0377 0.8917 33 1 2.4513 6.0377 -0.8883 34 1 2.3882 8.5807 0.0033 35 1 3.8368 11.2161 -1.5743 36 1 2.3956 10.9016 -0.5145 37 1 5.8445 12.7838 0.9184 38 1 3.2901 10.2733 1.9532 39 1 5.1061 10.3234 1.9262 40 1 1.3297 4.5113 0.0126 41 1 0.2124 2.3184 0.0006 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_4974302.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:39:52 Heat of formation + Delta-G solvation = -130.934397 kcal Electronic energy + Delta-G solvation = -25482.173128 eV Core-core repulsion = 21523.793999 eV Total energy + Delta-G solvation = -3958.379129 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.87178 -41.24142 -40.20948 -39.49103 -38.12704 -36.95399 -36.31870 -34.07556 -32.82415 -31.05515 -29.51115 -27.97389 -26.80955 -26.60938 -25.40464 -23.60536 -22.42672 -21.80161 -20.94505 -19.57018 -18.86263 -18.71247 -18.22138 -18.03958 -17.56355 -17.41310 -17.08249 -16.61997 -16.26261 -16.04082 -15.77767 -15.58716 -15.46420 -15.25259 -14.66249 -14.45522 -14.20712 -14.10645 -13.73538 -13.56791 -13.52707 -13.42798 -13.19488 -13.03676 -12.53416 -12.34059 -12.31130 -12.04122 -11.49350 -11.45780 -11.32812 -11.26699 -11.08915 -10.78432 -10.18413 -10.10996 -8.83575 -4.95003 0.05212 0.31986 1.31895 1.36782 1.43393 1.56659 1.90233 2.34233 2.52984 2.56829 3.08811 3.39544 3.46810 3.53657 3.64018 3.72153 3.76321 3.83703 3.92040 4.04808 4.07779 4.10703 4.11656 4.19561 4.26574 4.44702 4.45074 4.48743 4.64478 4.69391 4.78627 4.79544 4.90503 4.96009 4.96352 5.03293 5.11111 5.19518 5.39105 5.42826 6.11236 6.39121 6.44959 6.49020 6.81420 7.08137 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.119 4.119 6 C -0.083 4.083 7 O -0.545 6.545 8 Si 0.813 3.187 9 C 0.088 3.912 10 O -0.318 6.318 11 C 0.039 3.961 12 C 0.510 3.490 13 O -0.575 6.575 14 N -0.698 5.698 15 C 0.119 3.881 16 H 0.080 0.920 17 C -0.130 4.130 18 C 0.079 3.921 19 H 0.101 0.899 20 O -0.578 6.578 21 C -0.179 4.179 22 C -0.159 4.159 23 C -0.161 4.161 24 H 0.114 0.886 25 H 0.066 0.934 26 H 0.068 0.932 27 H 0.152 0.848 28 H 0.060 0.940 29 H 0.371 0.629 30 H -0.295 1.295 31 H -0.263 1.263 32 H 0.125 0.875 33 H 0.128 0.872 34 H 0.423 0.577 35 H 0.072 0.928 36 H 0.133 0.867 37 H 0.399 0.601 38 H 0.114 0.886 39 H 0.059 0.941 40 H 0.168 0.832 41 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.190 3.137 1.286 12.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.120 4.120 6 C -0.190 4.190 7 O -0.351 6.351 8 Si 0.714 3.286 9 C 0.043 3.957 10 O -0.232 6.232 11 C -0.039 4.039 12 C 0.297 3.703 13 O -0.454 6.454 14 N -0.352 5.352 15 C 0.014 3.986 16 H 0.098 0.902 17 C -0.168 4.168 18 C 0.020 3.980 19 H 0.119 0.881 20 O -0.386 6.386 21 C -0.218 4.218 22 C -0.177 4.177 23 C -0.180 4.180 24 H 0.133 0.867 25 H 0.085 0.915 26 H 0.086 0.914 27 H 0.170 0.830 28 H 0.078 0.922 29 H 0.220 0.780 30 H -0.222 1.222 31 H -0.189 1.189 32 H 0.142 0.858 33 H 0.145 0.855 34 H 0.262 0.738 35 H 0.091 0.909 36 H 0.151 0.849 37 H 0.250 0.750 38 H 0.133 0.867 39 H 0.078 0.922 40 H 0.186 0.814 41 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -10.397 1.620 1.317 10.605 hybrid contribution -0.457 2.244 0.887 2.456 sum -10.855 3.864 2.204 11.731 Atomic orbital electron populations 1.23359 0.76357 1.05625 1.02383 1.86086 1.23412 1.26280 1.88911 1.18975 0.91908 0.85392 0.99135 1.20180 0.92472 0.96738 1.04259 1.19450 0.95967 0.91056 1.05550 1.25543 0.92955 1.12568 0.87947 1.86655 1.74238 1.42196 1.32038 0.92222 0.76198 0.78931 0.81271 1.18814 0.91809 0.84192 1.00845 1.86092 1.35637 1.12003 1.89475 1.22726 0.92516 0.81694 1.06931 1.20673 0.88373 0.85744 0.75525 1.90773 1.16997 1.87435 1.50146 1.45685 1.11273 1.03894 1.74370 1.22462 0.95430 0.82747 0.97953 0.90190 1.23512 1.01951 0.92306 0.99039 1.22631 0.85291 0.93975 0.96141 0.88124 1.86438 1.32784 1.73711 1.45702 1.24179 1.03705 0.96940 0.96966 1.21376 0.91963 1.00086 1.04294 1.21428 1.01628 0.90887 1.04016 0.86746 0.91519 0.91384 0.83048 0.92232 0.78049 1.22226 1.18853 0.85769 0.85468 0.73813 0.90922 0.84869 0.75012 0.86727 0.92176 0.81430 0.82019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.70 10.50 -93.27 -0.98 -1.68 16 3 C 0.09 0.25 6.69 22.49 0.15 0.40 16 4 C -0.12 -0.56 8.59 22.35 0.19 -0.37 16 5 C -0.12 -0.78 5.27 -19.78 -0.10 -0.89 16 6 C -0.08 -0.75 2.33 71.24 0.17 -0.58 16 7 O -0.55 -5.97 12.65 -148.98 -1.89 -7.86 16 8 Si 0.81 4.80 30.17 68.60 2.07 6.87 16 9 C 0.09 0.35 6.62 22.49 0.15 0.49 16 10 O -0.32 -1.71 8.56 -74.33 -0.64 -2.34 16 11 C 0.04 -0.15 5.22 71.24 0.37 0.23 16 12 C 0.51 1.58 7.91 87.66 0.69 2.27 16 13 O -0.58 -9.01 16.10 16.00 0.26 -8.76 16 14 N -0.70 2.83 5.35 -440.03 -2.36 0.48 16 15 C 0.12 0.00 4.17 45.52 0.19 0.19 16 16 H 0.08 0.70 7.47 -2.39 -0.02 0.68 16 17 C -0.13 0.65 7.66 31.12 0.24 0.89 16 18 C 0.08 -0.32 5.28 31.12 0.16 -0.16 16 19 H 0.10 -0.88 8.14 -2.38 -0.02 -0.90 16 20 O -0.58 -0.44 13.59 -148.98 -2.02 -2.46 16 21 C -0.18 0.53 7.71 31.12 0.24 0.77 16 22 C -0.16 0.37 9.03 22.35 0.20 0.57 16 23 C -0.16 0.31 9.03 22.35 0.20 0.51 16 24 H 0.11 -0.98 8.14 -2.38 -0.02 -1.00 16 25 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 26 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 27 H 0.15 0.29 5.13 -2.91 -0.01 0.28 16 28 H 0.06 0.70 7.82 -2.39 -0.02 0.68 16 29 H 0.37 3.22 8.60 -74.06 -0.64 2.58 16 30 H -0.29 -3.62 7.11 99.48 0.71 -2.92 16 31 H -0.26 -2.00 7.11 99.48 0.71 -1.30 16 32 H 0.12 -1.26 7.65 -2.39 -0.02 -1.28 16 33 H 0.13 -1.33 7.67 -2.39 -0.02 -1.35 16 34 H 0.42 -5.48 8.73 -92.71 -0.81 -6.29 16 35 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 36 H 0.13 -1.58 8.12 -2.39 -0.02 -1.60 16 37 H 0.40 -2.87 9.12 -74.06 -0.68 -3.55 16 38 H 0.11 -0.85 8.14 -2.39 -0.02 -0.87 16 39 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 40 H 0.17 -1.71 6.29 -2.91 -0.02 -1.73 16 41 H 0.16 -1.28 6.29 -2.91 -0.02 -1.30 16 Total: 0.00 -28.91 345.38 -2.57 -31.48 By element: Atomic # 1 Polarization: -20.09 SS G_CDS: -0.99 Total: -21.08 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: 3.97 Total: 5.34 kcal Atomic # 7 Polarization: 2.83 SS G_CDS: -2.36 Total: 0.48 kcal Atomic # 8 Polarization: -17.83 SS G_CDS: -5.27 Total: -23.09 kcal Atomic # 14 Polarization: 4.80 SS G_CDS: 2.07 Total: 6.87 kcal Total: -28.91 -2.57 -31.48 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_4974302.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.453 kcal (2) G-P(sol) polarization free energy of solvation -28.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.573 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.481 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.934 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds