Wall clock time and date at job start Sat Mar 6 2021 19:40:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86303 * 109.47341 * 2 1 4 4 C 1.50709 * 109.47443 * 239.99937 * 2 1 3 5 5 C 1.35448 * 125.56204 * 119.97597 * 4 2 1 6 6 C 1.39838 * 107.86414 * 180.02562 * 5 4 2 7 7 C 1.37878 * 107.08065 * 0.02562 * 6 5 4 8 8 C 1.46682 * 126.22904 * 180.02562 * 7 6 5 9 9 O 1.21696 * 120.00274 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99915 * 180.02562 * 8 7 6 11 11 C 1.46494 * 119.99819 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.85279 * 23.80103 * 11 10 8 13 13 C 1.53781 * 113.61256 * 155.00164 * 11 10 8 14 14 C 1.53774 * 87.08242 * 89.11572 * 13 11 10 15 15 H 1.09002 * 113.61259 * 270.79727 * 14 13 11 16 16 O 1.42903 * 113.61673 * 139.98515 * 14 13 11 17 17 C 1.53776 * 87.08537 * 25.43454 * 14 13 11 18 18 N 1.35529 * 125.56398 * 300.33102 * 4 2 1 19 19 H 0.96699 * 113.99702 * 60.00231 * 1 2 3 20 20 H 1.09004 * 109.47114 * 119.99915 * 2 1 3 21 21 H 1.48501 * 109.99476 * 59.99820 * 3 2 1 22 22 H 1.48498 * 109.99989 * 181.31449 * 3 2 1 23 23 H 1.07996 * 126.07186 * 359.97438 * 5 4 2 24 24 H 1.07997 * 126.46036 * 179.97438 * 6 5 4 25 25 H 0.96997 * 119.99990 * 359.97438 * 10 8 7 26 26 H 1.08995 * 113.61579 * 334.55796 * 13 11 10 27 27 H 1.09002 * 113.61441 * 203.66447 * 13 11 10 28 28 H 0.96700 * 114.00311 * 179.97438 * 16 14 13 29 29 H 1.08994 * 113.61624 * 89.11363 * 17 14 13 30 30 H 1.08999 * 113.61419 * 220.02613 * 17 14 13 31 31 H 0.97008 * 125.67957 * 359.97438 * 18 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7130 -0.1634 -2.1920 6 6 2.9564 -1.1456 -3.1572 7 6 2.3013 -2.2874 -2.7472 8 6 2.2780 -3.5738 -3.4517 9 8 2.8773 -3.7028 -4.5030 10 7 1.5929 -4.6129 -2.9347 11 6 1.5692 -5.8974 -3.6386 12 1 2.4240 -6.0329 -4.3011 13 6 1.3075 -7.1002 -2.7167 14 6 -0.1912 -6.8712 -2.9738 15 1 -0.6551 -6.1827 -2.2675 16 8 -0.9348 -8.0801 -3.1401 17 6 0.2176 -6.2118 -4.3016 18 7 1.6693 -1.9989 -1.5590 19 1 -0.3933 0.4417 -0.7651 20 1 1.7923 -0.5138 0.8900 21 1 1.5614 2.4678 1.2085 22 1 3.5346 1.7702 -0.0320 23 1 3.0821 0.8513 -2.2104 24 1 3.5457 -1.0311 -4.0549 25 1 1.1155 -4.5102 -2.0966 26 1 1.6042 -6.9298 -1.6819 27 1 1.6795 -8.0444 -3.1147 28 1 -1.8782 -7.9425 -3.3017 29 1 0.2916 -6.9130 -5.1327 30 1 -0.3657 -5.3241 -4.5460 31 1 1.1282 -2.6159 -1.0417 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_6580494.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:40:09 Heat of formation + Delta-G solvation = -40.199598 kcal Electronic energy + Delta-G solvation = -16824.684222 eV Core-core repulsion = 13881.479500 eV Total energy + Delta-G solvation = -2943.204722 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 239.099 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.58790 -41.12924 -39.38402 -37.83158 -36.47753 -34.02669 -32.14168 -31.35076 -27.23587 -26.92960 -25.36291 -23.38077 -21.71402 -21.22436 -20.62420 -19.98168 -18.73807 -18.12292 -17.04260 -16.78133 -16.59610 -16.10736 -15.89866 -15.38824 -15.21126 -15.04522 -14.54416 -14.42972 -14.04734 -13.80697 -13.63675 -13.48772 -12.90107 -12.55223 -12.29438 -12.09910 -11.66526 -11.24551 -10.91253 -10.80978 -10.28201 -10.12470 -9.31030 -5.09656 0.30316 1.06934 1.48694 1.60364 1.79415 1.88015 2.09079 2.31054 3.08034 3.22140 3.28547 3.47601 3.49473 3.64811 3.73200 3.79205 4.16827 4.22272 4.33543 4.43553 4.59944 4.65875 4.73783 4.79919 4.89795 4.95884 5.04344 5.35336 5.54607 5.77728 6.13614 6.31029 6.33594 6.55560 7.04360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.056 4.056 3 Si 0.722 3.278 4 C 0.023 3.977 5 C -0.200 4.200 6 C -0.095 4.095 7 C -0.053 4.053 8 C 0.594 3.406 9 O -0.520 6.520 10 N -0.717 5.717 11 C 0.122 3.878 12 H 0.115 0.885 13 C -0.135 4.135 14 C 0.075 3.925 15 H 0.078 0.922 16 O -0.558 6.558 17 C -0.180 4.180 18 N -0.524 5.524 19 H 0.383 0.617 20 H 0.115 0.885 21 H -0.253 1.253 22 H -0.252 1.252 23 H 0.152 0.848 24 H 0.154 0.846 25 H 0.394 0.606 26 H 0.079 0.921 27 H 0.108 0.892 28 H 0.381 0.619 29 H 0.102 0.898 30 H 0.074 0.926 31 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.206 2.150 1.578 4.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.166 4.166 3 Si 0.622 3.378 4 C -0.095 4.095 5 C -0.224 4.224 6 C -0.122 4.122 7 C -0.166 4.166 8 C 0.382 3.618 9 O -0.395 6.395 10 N -0.368 5.368 11 C 0.017 3.983 12 H 0.133 0.867 13 C -0.173 4.173 14 C 0.016 3.984 15 H 0.096 0.904 16 O -0.363 6.363 17 C -0.219 4.219 18 N -0.120 5.120 19 H 0.231 0.769 20 H 0.133 0.867 21 H -0.178 1.178 22 H -0.177 1.177 23 H 0.169 0.831 24 H 0.171 0.829 25 H 0.228 0.772 26 H 0.098 0.902 27 H 0.126 0.874 28 H 0.229 0.771 29 H 0.121 0.879 30 H 0.093 0.907 31 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -1.686 1.921 1.936 3.207 hybrid contribution -1.049 -0.714 0.760 1.480 sum -2.735 1.207 2.696 4.026 Atomic orbital electron populations 1.86497 1.17024 1.81759 1.49665 1.24986 0.85197 1.11111 0.95311 0.93993 0.81105 0.75868 0.86875 1.21166 1.03630 0.85178 0.99549 1.20727 1.05218 1.00656 0.95831 1.21352 1.00206 0.90482 1.00142 1.20417 1.08208 0.96607 0.91414 1.17051 0.78505 0.81906 0.84386 1.90882 1.43949 1.82682 1.21964 1.45588 1.53535 1.11447 1.26262 1.21666 0.99562 0.81970 0.95149 0.86729 1.23469 0.94165 0.99037 1.00674 1.23430 0.92185 0.86581 0.96203 0.90374 1.86536 1.24613 1.30657 1.94534 1.24164 0.97220 1.01644 0.98856 1.41932 1.39914 1.11258 1.18926 0.76856 0.86725 1.17807 1.17655 0.83071 0.82860 0.77187 0.90236 0.87394 0.77142 0.87921 0.90712 0.74655 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.03 12.88 -35.23 -0.45 0.58 16 2 C -0.06 0.12 3.08 36.01 0.11 0.23 16 3 Si 0.72 -1.89 30.54 -169.99 -5.19 -7.08 16 4 C 0.02 -0.03 6.47 -81.95 -0.53 -0.56 16 5 C -0.20 0.09 9.32 -39.98 -0.37 -0.28 16 6 C -0.10 -0.12 10.65 -39.12 -0.42 -0.54 16 7 C -0.05 -0.06 7.06 -81.98 -0.58 -0.63 16 8 C 0.59 1.35 7.79 -12.85 -0.10 1.25 16 9 O -0.52 -3.19 16.48 5.19 0.09 -3.11 16 10 N -0.72 0.56 5.26 -54.32 -0.29 0.28 16 11 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 12 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 13 C -0.14 0.17 7.66 -25.92 -0.20 -0.03 16 14 C 0.08 -0.11 5.09 -25.93 -0.13 -0.24 16 15 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 16 O -0.56 0.01 13.67 -35.23 -0.48 -0.47 16 17 C -0.18 0.15 7.71 -25.92 -0.20 -0.05 16 18 N -0.52 0.69 5.99 -5.69 -0.03 0.65 16 19 H 0.38 -2.05 8.70 45.56 0.40 -1.65 16 20 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 21 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 22 H -0.25 0.01 7.11 56.52 0.40 0.41 16 23 H 0.15 -0.37 6.17 -52.49 -0.32 -0.70 16 24 H 0.15 0.16 8.06 -52.49 -0.42 -0.26 16 25 H 0.39 -1.36 7.83 -40.82 -0.32 -1.68 16 26 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 27 H 0.11 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.38 -1.48 9.12 45.56 0.42 -1.06 16 29 H 0.10 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.42 -1.50 8.19 -40.82 -0.33 -1.83 16 LS Contribution 272.38 15.07 4.10 4.10 Total: 0.00 -8.62 272.38 -7.67 -16.29 By element: Atomic # 1 Polarization: -7.37 SS G_CDS: -2.70 Total: -10.07 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -2.71 Total: -1.18 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.32 Total: 0.93 kcal Atomic # 8 Polarization: -2.14 SS G_CDS: -0.85 Total: -2.99 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: -5.19 Total: -7.08 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -8.62 -7.67 -16.29 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_6580494.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.914 kcal (2) G-P(sol) polarization free energy of solvation -8.621 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.286 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds