Wall clock time and date at job start Sat Mar 6 2021 19:40:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86294 * 109.46742 * 2 1 4 4 C 1.50695 * 109.46805 * 119.99758 * 2 1 3 5 5 C 1.32770 * 124.71403 * 65.27838 * 4 2 1 6 6 C 1.44422 * 113.08643 * 180.17708 * 5 4 2 7 7 C 1.47192 * 123.46514 * 179.80681 * 6 5 4 8 8 O 1.21643 * 119.99750 * 359.73018 * 7 6 5 9 9 N 1.34777 * 120.00208 * 179.45691 * 7 6 5 10 10 C 1.46504 * 119.99854 * 180.27760 * 9 7 6 11 11 H 1.08995 * 112.84615 * 334.66197 * 10 9 7 12 12 C 1.53775 * 113.61442 * 105.85931 * 10 9 7 13 13 C 1.54055 * 86.98513 * 89.16201 * 12 10 9 14 14 H 1.09005 * 113.68767 * 270.87298 * 13 12 10 15 15 O 1.42897 * 113.61942 * 139.98175 * 13 12 10 16 16 C 1.53780 * 87.07878 * 25.42909 * 13 12 10 17 17 C 1.36014 * 113.07663 * 359.54102 * 6 5 4 18 18 S 1.70447 * 110.81627 * 0.24270 * 17 6 5 19 19 H 0.96701 * 114.00067 * 60.00626 * 1 2 3 20 20 H 1.08997 * 109.46972 * 240.00042 * 2 1 3 21 21 H 1.48500 * 110.00133 * 298.67970 * 3 2 1 22 22 H 1.48497 * 110.00088 * 60.00054 * 3 2 1 23 23 H 1.08004 * 123.46056 * 359.97438 * 5 4 2 24 24 H 0.97000 * 119.99736 * 0.27034 * 9 7 6 25 25 H 1.09005 * 113.61646 * 203.66312 * 12 10 9 26 26 H 1.09001 * 113.62209 * 334.56791 * 12 10 9 27 27 H 0.96693 * 114.00849 * 82.50447 * 15 13 12 28 28 H 1.08996 * 113.61415 * 220.02737 * 16 13 12 29 29 H 1.08996 * 113.61080 * 89.11793 * 16 13 12 30 30 H 1.07993 * 124.58980 * 180.24593 * 17 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.7530 -2.0014 1.4840 6 6 2.3357 -2.4180 2.7380 7 6 2.2692 -3.7983 3.2451 8 8 1.6964 -4.6561 2.6003 9 7 2.8475 -4.1128 4.4211 10 6 2.7865 -5.4879 4.9228 11 1 1.9304 -6.0414 4.5373 12 6 4.1176 -6.2480 4.8000 13 6 4.4670 -5.6977 6.1958 14 1 4.9721 -4.7321 6.1720 15 8 5.1244 -6.6472 7.0374 16 6 2.9535 -5.5951 6.4478 17 6 2.9573 -1.4052 3.3997 18 16 2.8398 0.0524 2.5240 19 1 -0.3933 0.4416 -0.7651 20 1 1.7924 -0.5138 -0.8900 21 1 1.5878 2.4585 -1.2242 22 1 1.5614 2.4678 1.2085 23 1 1.2235 -2.6706 0.8220 24 1 3.3043 -3.4287 4.9352 25 1 4.0009 -7.3315 4.7745 26 1 4.7636 -5.8722 4.0066 27 1 6.0766 -6.7162 6.8837 28 1 2.6603 -4.6924 6.9837 29 1 2.5192 -6.5004 6.8719 30 1 3.4575 -1.5104 4.3509 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_6894386.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:40:16 Heat of formation + Delta-G solvation = -50.393883 kcal Electronic energy + Delta-G solvation = -16428.685905 eV Core-core repulsion = 13511.391143 eV Total energy + Delta-G solvation = -2917.294762 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 256.060 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.41123 -39.85354 -38.63379 -37.24089 -36.38898 -33.92009 -31.73896 -26.99438 -26.86400 -26.41562 -24.62894 -22.09357 -20.64842 -20.51614 -18.85539 -18.70736 -18.45244 -17.96593 -16.81401 -16.45894 -16.15861 -15.97657 -15.59785 -15.30643 -14.74165 -14.21196 -13.99847 -13.85736 -13.78527 -13.50590 -13.41973 -12.88007 -12.71820 -12.46853 -12.41941 -12.00740 -11.59395 -10.91282 -10.84587 -10.65000 -10.16753 -9.99017 -9.50838 -5.16502 -0.37816 0.30715 0.66992 0.89085 1.14008 1.48173 1.80886 2.00636 2.33163 3.13885 3.18319 3.35279 3.55644 3.57358 3.73491 3.79580 3.87572 3.95510 4.23699 4.31095 4.50665 4.66516 4.70289 4.73063 4.83419 4.86683 4.96437 5.04899 5.21275 5.48216 6.31035 6.39681 6.60821 7.18111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.035 4.035 3 Si 0.646 3.354 4 C -0.197 4.197 5 C -0.054 4.054 6 C -0.155 4.155 7 C 0.582 3.418 8 O -0.528 6.528 9 N -0.711 5.711 10 C 0.122 3.878 11 H 0.112 0.888 12 C -0.180 4.180 13 C 0.075 3.925 14 H 0.080 0.920 15 O -0.558 6.558 16 C -0.135 4.135 17 C -0.209 4.209 18 S 0.208 5.792 19 H 0.383 0.617 20 H 0.088 0.912 21 H -0.237 1.237 22 H -0.234 1.234 23 H 0.156 0.844 24 H 0.399 0.601 25 H 0.101 0.899 26 H 0.074 0.926 27 H 0.380 0.620 28 H 0.080 0.920 29 H 0.107 0.893 30 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.884 3.809 0.074 6.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.147 4.147 3 Si 0.544 3.456 4 C -0.313 4.313 5 C -0.083 4.083 6 C -0.173 4.173 7 C 0.368 3.632 8 O -0.405 6.405 9 N -0.363 5.363 10 C 0.016 3.984 11 H 0.130 0.870 12 C -0.219 4.219 13 C 0.016 3.984 14 H 0.098 0.902 15 O -0.364 6.364 16 C -0.173 4.173 17 C -0.347 4.347 18 S 0.474 5.526 19 H 0.232 0.768 20 H 0.105 0.895 21 H -0.161 1.161 22 H -0.158 1.158 23 H 0.173 0.827 24 H 0.234 0.766 25 H 0.119 0.881 26 H 0.093 0.907 27 H 0.228 0.772 28 H 0.099 0.901 29 H 0.125 0.875 30 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 4.240 5.125 0.638 6.682 hybrid contribution -0.712 -1.227 -0.636 1.555 sum 3.528 3.897 0.002 5.257 Atomic orbital electron populations 1.86620 1.17310 1.80076 1.49948 1.24036 0.84610 1.10044 0.95986 0.95332 0.91818 0.75160 0.83295 1.23528 1.08941 0.97343 1.01509 1.21026 0.97618 0.94559 0.95091 1.20176 1.05861 0.93906 0.97372 1.17605 0.77988 0.87062 0.80537 1.90830 1.42880 1.49700 1.57065 1.45530 1.57675 1.10742 1.22351 1.21645 0.99535 0.82774 0.94404 0.87010 1.24206 0.97715 1.01935 0.98059 1.23494 0.93285 0.91886 0.89715 0.90226 1.86530 1.25781 1.61912 1.62182 1.23456 0.94503 1.04161 0.95181 1.25791 1.05189 0.98646 1.05071 1.83107 1.49876 1.08807 1.10769 0.76818 0.89469 1.16051 1.15752 0.82653 0.76591 0.88074 0.90695 0.77187 0.90135 0.87503 0.81096 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.48 12.86 -35.23 -0.45 -0.94 16 2 C -0.03 0.02 2.93 36.00 0.11 0.12 16 3 Si 0.65 -1.01 30.92 -169.99 -5.26 -6.26 16 4 C -0.20 -0.17 5.69 -36.18 -0.21 -0.38 16 5 C -0.05 -0.13 9.95 -39.02 -0.39 -0.51 16 6 C -0.15 -0.24 5.98 -104.63 -0.63 -0.87 16 7 C 0.58 1.72 7.79 -12.62 -0.10 1.62 16 8 O -0.53 -3.68 16.42 5.24 0.09 -3.59 16 9 N -0.71 0.17 5.23 -54.16 -0.28 -0.11 16 10 C 0.12 0.01 4.30 -67.12 -0.29 -0.27 16 11 H 0.11 0.21 7.50 -51.93 -0.39 -0.18 16 12 C -0.18 0.09 7.73 -25.78 -0.20 -0.11 16 13 C 0.08 -0.09 5.10 -25.77 -0.13 -0.23 16 14 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 15 O -0.56 -0.06 13.67 -35.23 -0.48 -0.55 16 16 C -0.13 0.13 7.65 -25.92 -0.20 -0.06 16 17 C -0.21 0.25 10.38 29.93 0.31 0.56 16 18 S 0.21 -0.22 20.20 -107.50 -2.17 -2.40 16 19 H 0.38 -1.27 8.74 45.56 0.40 -0.87 16 20 H 0.09 -0.19 7.96 -51.93 -0.41 -0.60 16 21 H -0.24 0.00 7.11 56.52 0.40 0.40 16 22 H -0.23 -0.26 7.11 56.52 0.40 0.14 16 23 H 0.16 0.47 8.06 -52.48 -0.42 0.05 16 24 H 0.40 -1.25 7.20 -40.82 -0.29 -1.54 16 25 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 26 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.38 -1.44 9.12 45.56 0.42 -1.02 16 28 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 29 H 0.11 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.17 -0.76 7.01 -52.49 -0.37 -1.13 16 LS Contribution 277.31 15.07 4.18 4.18 Total: 0.00 -8.65 277.31 -8.48 -17.13 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -2.38 Total: -7.34 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: -1.72 Total: -0.13 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.28 Total: -0.11 kcal Atomic # 8 Polarization: -4.23 SS G_CDS: -0.85 Total: -5.07 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.26 Total: -6.26 kcal Atomic # 16 Polarization: -0.22 SS G_CDS: -2.17 Total: -2.40 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -8.65 -8.48 -17.13 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_6894386.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.263 kcal (2) G-P(sol) polarization free energy of solvation -8.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.131 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds