Wall clock time and date at job start Sat Mar 6 2021 19:40:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36766 * 125.80147 * 2 1 4 4 C 1.47259 * 126.94391 * 359.95008 * 3 2 1 5 5 O 1.21626 * 120.00050 * 359.97438 * 4 3 2 6 6 N 1.34774 * 119.99818 * 179.97438 * 4 3 2 7 7 C 1.46502 * 119.99811 * 179.97438 * 6 4 3 8 8 H 1.09007 * 112.85169 * 23.80071 * 7 6 4 9 9 C 1.53782 * 113.61841 * 155.00093 * 7 6 4 10 10 C 1.53774 * 87.08382 * 139.98017 * 9 7 6 11 11 H 1.09008 * 113.61325 * 219.93352 * 10 9 7 12 12 O 1.42901 * 113.61767 * 89.11976 * 10 9 7 13 13 C 1.53776 * 87.08214 * 334.56503 * 10 9 7 14 14 C 1.46688 * 106.11340 * 179.97438 * 3 2 1 15 15 C 1.34486 * 106.33446 * 359.97438 * 14 3 2 16 16 C 1.50699 * 125.57351 * 179.97438 * 15 14 3 17 17 O 1.42898 * 109.46964 * 300.00243 * 16 15 14 18 18 Si 1.86301 * 109.47146 * 180.02562 * 16 15 14 19 19 N 1.34657 * 125.79562 * 180.23140 * 2 1 3 20 20 H 1.09002 * 109.47247 * 89.99570 * 1 2 3 21 21 H 1.09005 * 109.47187 * 210.00243 * 1 2 3 22 22 H 1.09001 * 109.46816 * 329.99290 * 1 2 3 23 23 H 0.96996 * 120.00466 * 359.97438 * 6 4 3 24 24 H 1.09007 * 113.61310 * 254.53442 * 9 7 6 25 25 H 1.09003 * 113.60848 * 25.42628 * 9 7 6 26 26 H 0.96694 * 114.00026 * 179.97438 * 12 10 9 27 27 H 1.08993 * 113.62208 * 270.88338 * 13 10 9 28 28 H 1.09005 * 113.61084 * 139.97754 * 13 10 9 29 29 H 1.07994 * 126.83510 * 179.97438 * 14 3 2 30 30 H 1.09002 * 109.46959 * 60.00214 * 16 15 14 31 31 H 0.96708 * 113.99549 * 180.02562 * 17 16 15 32 32 H 1.48501 * 110.00188 * 298.68222 * 18 16 15 33 33 H 1.48498 * 110.00005 * 60.00183 * 18 16 15 34 34 H 0.96995 * 124.86017 * 0.02990 * 19 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 -0.0010 5 8 0.6840 2.7839 -0.0025 6 7 2.7851 3.5053 -0.0004 7 6 2.3505 4.9044 -0.0019 8 1 1.3467 5.0363 0.4019 9 6 3.3864 5.8719 0.5944 10 6 3.0064 6.8482 -0.5313 11 1 3.8592 7.3776 -0.9565 12 8 1.9252 7.7191 -0.1931 13 6 2.5746 5.6175 -1.3459 14 6 3.6882 0.6150 0.0006 15 6 3.6096 -0.7275 0.0015 16 6 4.7819 -1.6744 0.0019 17 8 5.5755 -1.4503 -1.1652 18 14 4.1614 -3.4310 0.0024 19 7 2.2946 -1.0922 -0.0044 20 1 -0.3634 0.0001 -1.0277 21 1 -0.3634 -0.8900 0.5139 22 1 -0.3633 0.8899 0.5140 23 1 3.7312 3.2913 0.0012 24 1 3.1261 6.2309 1.5902 25 1 4.4119 5.5081 0.5292 26 1 1.6819 8.3357 -0.8970 27 1 3.3779 5.1841 -1.9416 28 1 1.6586 5.7711 -1.9166 29 1 4.5890 1.2107 0.0004 30 1 5.3876 -1.5024 0.8916 31 1 6.3492 -2.0267 -1.2313 32 1 3.3606 -3.6865 1.2266 33 1 3.3344 -3.6779 -1.2061 34 1 1.9734 -2.0074 -0.0085 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_9865296.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:40:27 Heat of formation + Delta-G solvation = -41.886729 kcal Electronic energy + Delta-G solvation = -18606.203403 eV Core-core repulsion = 15507.387903 eV Total energy + Delta-G solvation = -3098.815500 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -42.47566 -40.83873 -39.20209 -37.80350 -36.11606 -33.81245 -32.88392 -31.92488 -29.04042 -26.74495 -26.25937 -24.85936 -22.92238 -21.49324 -21.09667 -20.23942 -18.65030 -18.41032 -18.09033 -17.15004 -16.89946 -16.29484 -15.92345 -15.75914 -15.39455 -14.89747 -14.87479 -14.51810 -14.39985 -14.13078 -13.76552 -13.51375 -13.46676 -13.39526 -13.02954 -12.92213 -12.48458 -12.19761 -12.16828 -11.40818 -10.85293 -10.65444 -10.47909 -9.96865 -9.75153 -9.12240 -5.32273 0.78346 0.97460 1.20218 1.41058 1.64483 1.90388 2.49940 2.68190 3.05306 3.30613 3.50888 3.66070 3.72983 3.83249 3.88536 4.11831 4.14529 4.18009 4.28383 4.49919 4.59305 4.63850 4.69472 4.76369 4.82814 4.99260 5.01219 5.04313 5.17590 5.31771 5.68256 5.74307 5.87452 6.25736 6.47186 6.67730 6.76506 7.52900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.123 3.877 3 C -0.240 4.240 4 C 0.595 3.405 5 O -0.548 6.548 6 N -0.718 5.718 7 C 0.132 3.868 8 H 0.120 0.880 9 C -0.141 4.141 10 C 0.081 3.919 11 H 0.075 0.925 12 O -0.551 6.551 13 C -0.185 4.185 14 C -0.122 4.122 15 C 0.012 3.988 16 C -0.039 4.039 17 O -0.543 6.543 18 Si 0.682 3.318 19 N -0.551 5.551 20 H 0.082 0.918 21 H 0.065 0.935 22 H 0.106 0.894 23 H 0.400 0.600 24 H 0.084 0.916 25 H 0.098 0.902 26 H 0.384 0.616 27 H 0.092 0.908 28 H 0.078 0.922 29 H 0.149 0.851 30 H 0.086 0.914 31 H 0.385 0.615 32 H -0.252 1.252 33 H -0.250 1.250 34 H 0.409 0.591 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.854 -3.362 -0.233 6.755 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.005 3.995 3 C -0.250 4.250 4 C 0.385 3.615 5 O -0.427 6.427 6 N -0.368 5.368 7 C 0.027 3.973 8 H 0.137 0.863 9 C -0.179 4.179 10 C 0.021 3.979 11 H 0.092 0.908 12 O -0.356 6.356 13 C -0.224 4.224 14 C -0.147 4.147 15 C -0.095 4.095 16 C -0.151 4.151 17 O -0.349 6.349 18 Si 0.582 3.418 19 N -0.151 5.151 20 H 0.100 0.900 21 H 0.084 0.916 22 H 0.124 0.876 23 H 0.235 0.765 24 H 0.103 0.897 25 H 0.117 0.883 26 H 0.232 0.768 27 H 0.110 0.890 28 H 0.096 0.904 29 H 0.166 0.834 30 H 0.104 0.896 31 H 0.233 0.767 32 H -0.176 1.176 33 H -0.174 1.174 34 H 0.247 0.753 Dipole moment (debyes) X Y Z Total from point charges 3.860 -3.719 0.227 5.365 hybrid contribution 0.466 0.159 -0.506 0.707 sum 4.326 -3.560 -0.279 5.610 Atomic orbital electron populations 1.20663 0.86451 1.04586 1.03934 1.20425 0.93834 0.85136 1.00110 1.20123 0.92988 0.92086 1.19796 1.17311 0.85337 0.83977 0.74918 1.90749 1.16616 1.84339 1.50945 1.45759 1.09632 1.05553 1.75898 1.22459 0.99935 0.78649 0.96215 0.86255 1.23464 0.99642 0.95074 0.99764 1.22489 0.89542 0.89515 0.96331 0.90753 1.86472 1.52889 1.51814 1.44468 1.24174 1.02928 0.97406 0.97890 1.21758 0.95667 0.92332 1.04900 1.19216 0.83213 0.94456 1.12640 1.23907 0.92747 1.07013 0.91403 1.86507 1.42113 1.64408 1.41856 0.94590 0.87284 0.79137 0.80739 1.41750 1.05679 1.08325 1.59338 0.89958 0.91597 0.87582 0.76525 0.89693 0.88316 0.76795 0.89000 0.90364 0.83356 0.89639 0.76664 1.17634 1.17355 0.75252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.17 9.88 36.01 0.36 0.18 16 2 C 0.12 0.39 7.17 -81.88 -0.59 -0.20 16 3 C -0.24 -0.93 6.29 -103.35 -0.65 -1.58 16 4 C 0.60 2.89 7.81 -12.60 -0.10 2.79 16 5 O -0.55 -4.28 14.41 5.25 0.08 -4.20 16 6 N -0.72 -1.37 5.35 -54.14 -0.29 -1.66 16 7 C 0.13 0.25 4.18 -67.11 -0.28 -0.03 16 8 H 0.12 0.54 7.46 -51.93 -0.39 0.15 16 9 C -0.14 0.01 7.66 -25.92 -0.20 -0.19 16 10 C 0.08 -0.01 5.28 -25.92 -0.14 -0.15 16 11 H 0.07 -0.13 8.14 -51.92 -0.42 -0.55 16 12 O -0.55 -0.64 13.59 -35.23 -0.48 -1.12 16 13 C -0.18 -0.10 7.71 -25.92 -0.20 -0.30 16 14 C -0.12 -0.28 10.43 -37.50 -0.39 -0.67 16 15 C 0.01 0.02 6.14 -81.86 -0.50 -0.48 16 16 C -0.04 0.05 2.97 36.01 0.11 0.16 16 17 O -0.54 0.54 12.84 -35.23 -0.45 0.09 16 18 Si 0.68 -1.74 30.94 -169.99 -5.26 -7.00 16 19 N -0.55 -1.02 5.41 -5.42 -0.03 -1.05 16 20 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 21 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 22 H 0.11 0.36 6.47 -51.93 -0.34 0.03 16 23 H 0.40 -0.21 7.85 -40.82 -0.32 -0.53 16 24 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 25 H 0.10 -0.21 8.12 -51.93 -0.42 -0.63 16 26 H 0.38 -1.13 9.12 45.56 0.42 -0.71 16 27 H 0.09 -0.03 8.14 -51.93 -0.42 -0.46 16 28 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 29 H 0.15 0.01 7.69 -52.49 -0.40 -0.39 16 30 H 0.09 -0.26 7.96 -51.93 -0.41 -0.68 16 31 H 0.39 -2.37 8.74 45.56 0.40 -1.97 16 32 H -0.25 0.08 7.11 56.52 0.40 0.49 16 33 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 34 H 0.41 0.03 6.70 -40.82 -0.27 -0.25 16 LS Contribution 291.25 15.07 4.39 4.39 Total: 0.00 -9.58 291.25 -8.10 -17.68 By element: Atomic # 1 Polarization: -3.20 SS G_CDS: -3.48 Total: -6.67 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -2.58 Total: -0.46 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -0.32 Total: -2.71 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.86 Total: -5.23 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.26 Total: -7.00 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -9.58 -8.10 -17.68 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_9865296.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.202 kcal (2) G-P(sol) polarization free energy of solvation -9.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds