Wall clock time and date at job start Sat Mar 6 2021 17:43:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53002 * 109.47323 * 2 1 4 4 C 1.53000 * 109.47562 * 119.99944 * 2 1 3 5 5 C 1.53007 * 109.46692 * 64.99878 * 4 2 1 6 6 O 1.42905 * 109.46919 * 179.97438 * 5 4 2 7 7 C 1.42895 * 114.00128 * 179.97438 * 6 5 4 8 8 H 1.08998 * 109.47064 * 330.01060 * 7 6 5 9 9 C 1.53006 * 109.47000 * 90.00194 * 7 6 5 10 10 C 1.52997 * 109.47164 * 180.02562 * 9 7 6 11 11 C 1.53002 * 109.46978 * 299.99874 * 10 9 7 12 12 H 1.08992 * 109.47056 * 300.00064 * 11 10 9 13 13 N 1.46505 * 109.46958 * 180.02562 * 11 10 9 14 14 C 1.34777 * 119.99797 * 84.99979 * 13 11 10 15 15 O 1.21565 * 119.99841 * 0.02562 * 14 13 11 16 16 C 1.47695 * 119.99755 * 179.97438 * 14 13 11 17 17 C 1.39823 * 120.16333 * 180.02562 * 16 14 13 18 18 F 1.35099 * 120.11188 * 359.97438 * 17 16 14 19 19 C 1.38318 * 119.77974 * 180.02562 * 17 16 14 20 20 C 1.38214 * 120.11434 * 0.02562 * 19 17 16 21 21 C 1.38450 * 120.33985 * 0.02562 * 20 19 17 22 22 C 1.50701 * 119.89072 * 179.97438 * 21 20 19 23 23 O 1.42909 * 109.46854 * 120.00008 * 22 21 20 24 24 Si 1.86293 * 109.47055 * 0.02562 * 22 21 20 25 25 C 1.37862 * 120.21846 * 359.67356 * 21 20 19 26 26 C 1.52996 * 109.46891 * 60.00410 * 11 10 9 27 27 C 1.52997 * 109.47503 * 210.00358 * 7 6 5 28 28 H 1.08995 * 109.47752 * 60.00146 * 1 2 3 29 29 H 1.09003 * 109.47272 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47021 * 299.99314 * 1 2 3 31 31 H 1.09004 * 109.47204 * 240.00010 * 2 1 3 32 32 H 1.08993 * 109.47636 * 180.02562 * 3 2 1 33 33 H 1.09003 * 109.46880 * 300.00430 * 3 2 1 34 34 H 1.09004 * 109.46973 * 59.99868 * 3 2 1 35 35 H 1.08995 * 109.47343 * 305.00662 * 4 2 1 36 36 H 1.08996 * 109.47286 * 184.99941 * 4 2 1 37 37 H 1.09001 * 109.47084 * 60.00797 * 5 4 2 38 38 H 1.08996 * 109.47307 * 300.00051 * 5 4 2 39 39 H 1.09001 * 109.47002 * 59.99969 * 9 7 6 40 40 H 1.09000 * 109.47050 * 300.00235 * 9 7 6 41 41 H 1.09002 * 109.47045 * 180.02562 * 10 9 7 42 42 H 1.09001 * 109.47375 * 59.99966 * 10 9 7 43 43 H 0.97001 * 119.99745 * 265.00017 * 13 11 10 44 44 H 1.07994 * 119.94614 * 179.97438 * 19 17 16 45 45 H 1.07997 * 119.82649 * 179.97438 * 20 19 17 46 46 H 1.08991 * 109.47366 * 239.99526 * 22 21 20 47 47 H 0.96705 * 113.99627 * 180.02562 * 23 22 21 48 48 H 1.48502 * 110.00105 * 298.67862 * 24 22 21 49 49 H 1.48504 * 110.00510 * 59.99672 * 24 22 21 50 50 H 1.08005 * 120.06386 * 180.30064 * 25 21 20 51 51 H 1.09004 * 109.47368 * 179.97438 * 26 11 10 52 52 H 1.09001 * 109.47372 * 59.99964 * 26 11 10 53 53 H 1.09002 * 109.47153 * 60.00043 * 27 7 6 54 54 H 1.09001 * 109.46832 * 300.00234 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 1.2492 5 6 1.6353 -2.1955 1.1879 6 8 2.1122 -2.8693 2.3544 7 6 1.7854 -4.2597 2.3969 8 1 0.8477 -4.4289 1.8675 9 6 2.9008 -5.0665 1.7290 10 6 2.5506 -6.5551 1.7740 11 6 2.4011 -7.0001 3.2302 12 1 3.3387 -6.8313 3.7597 13 7 2.0664 -8.4258 3.2733 14 6 3.0464 -9.3498 3.2267 15 8 4.2082 -9.0002 3.1495 16 6 2.7090 -10.7870 3.2707 17 6 3.7230 -11.7485 3.2232 18 9 5.0159 -11.3663 3.1362 19 6 3.3980 -13.0923 3.2643 20 6 2.0752 -13.4835 3.3517 21 6 1.0672 -12.5355 3.3980 22 6 -0.3717 -12.9733 3.4926 23 8 -0.9515 -12.4486 4.6887 24 14 -0.4535 -14.8341 3.5279 25 6 1.3758 -11.1923 3.3641 26 6 1.2857 -6.1935 3.8980 27 6 1.6362 -4.7043 3.8532 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3633 0.5137 0.8900 31 1 1.8933 -0.5138 -0.8900 32 1 3.1299 1.4426 -0.0005 33 1 1.6766 1.9563 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6054 -0.2618 2.1369 36 1 3.1263 -0.6443 1.2951 37 1 2.0699 -2.6550 0.3002 38 1 0.5490 -2.2724 1.1420 39 1 3.8385 -4.8973 2.2584 40 1 3.0070 -4.7497 0.6915 41 1 3.3454 -7.1299 1.2986 42 1 1.6129 -6.7240 1.2444 43 1 1.1394 -8.7046 3.3353 44 1 4.1790 -13.8373 3.2274 45 1 1.8267 -14.5340 3.3831 46 1 -0.9222 -12.6014 2.6286 47 1 -1.8790 -12.6915 4.8155 48 1 0.1177 -15.3916 2.2757 49 1 0.2933 -15.3533 4.7019 50 1 0.5878 -10.4549 3.4052 51 1 1.1789 -6.5107 4.9353 52 1 0.3481 -6.3623 3.3684 53 1 0.8416 -4.1296 4.3290 54 1 2.5739 -4.5351 4.3826 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12222500_12335834.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:43:24 Heat of formation + Delta-G solvation = -150.759244 kcal Electronic energy + Delta-G solvation = -33065.854563 eV Core-core repulsion = 28496.838078 eV Total energy + Delta-G solvation = -4569.016486 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.204 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -50.15286 -41.62201 -40.49745 -39.77306 -38.29075 -37.44103 -36.93667 -34.99922 -32.95555 -32.49878 -31.92355 -30.71769 -29.06387 -28.05304 -26.63583 -25.66676 -24.32918 -23.88058 -23.47920 -22.50096 -21.67989 -21.14329 -20.74809 -19.28916 -18.59430 -18.24523 -17.99744 -17.77130 -17.09609 -17.04684 -16.89722 -16.52588 -16.27826 -16.03508 -15.91355 -15.65570 -15.46336 -15.06212 -14.88555 -14.81803 -14.57242 -14.49582 -14.26791 -14.10490 -14.06846 -13.95423 -13.44955 -13.34745 -13.26724 -13.07160 -12.88976 -12.86547 -12.67529 -12.50423 -12.40919 -12.22708 -12.13861 -11.99864 -11.79359 -11.67888 -11.55540 -11.43036 -11.40942 -11.19214 -10.58631 -10.42398 -10.39230 -10.17343 -9.87972 -4.91281 -0.66749 -0.17808 1.30374 1.47877 1.68337 1.83010 1.98932 2.33390 2.61670 2.88482 3.22419 3.26340 3.42344 3.56610 3.62770 3.65109 3.86515 3.88521 3.89122 3.98166 4.02514 4.06336 4.07524 4.14755 4.21169 4.25456 4.28117 4.36207 4.39774 4.44101 4.49245 4.51825 4.56485 4.64960 4.67028 4.70453 4.75106 4.76872 4.80710 4.90354 4.90771 4.97189 4.99203 4.99742 5.05767 5.06541 5.08732 5.09988 5.20154 5.24094 5.29292 5.36977 5.41275 5.42577 5.46228 6.30216 6.31248 6.94226 6.98385 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.149 4.149 4 C -0.112 4.112 5 C 0.059 3.941 6 O -0.403 6.403 7 C 0.090 3.910 8 H 0.079 0.921 9 C -0.134 4.134 10 C -0.119 4.119 11 C 0.144 3.856 12 H 0.064 0.936 13 N -0.701 5.701 14 C 0.556 3.444 15 O -0.569 6.569 16 C -0.183 4.183 17 C 0.133 3.867 18 F -0.133 7.133 19 C -0.154 4.154 20 C -0.075 4.075 21 C -0.100 4.100 22 C -0.071 4.071 23 O -0.561 6.561 24 Si 0.763 3.237 25 C -0.018 4.018 26 C -0.112 4.112 27 C -0.111 4.111 28 H 0.059 0.941 29 H 0.060 0.940 30 H 0.055 0.945 31 H 0.072 0.928 32 H 0.053 0.947 33 H 0.060 0.940 34 H 0.055 0.945 35 H 0.066 0.934 36 H 0.060 0.940 37 H 0.049 0.951 38 H 0.062 0.938 39 H 0.054 0.946 40 H 0.068 0.932 41 H 0.046 0.954 42 H 0.087 0.913 43 H 0.417 0.583 44 H 0.162 0.838 45 H 0.141 0.859 46 H 0.111 0.889 47 H 0.407 0.593 48 H -0.285 1.285 49 H -0.297 1.297 50 H 0.172 0.828 51 H 0.086 0.914 52 H 0.097 0.903 53 H 0.086 0.914 54 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.634 -2.332 -1.652 12.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.112 4.112 3 C -0.206 4.206 4 C -0.149 4.149 5 C -0.017 4.017 6 O -0.322 6.322 7 C 0.033 3.967 8 H 0.097 0.903 9 C -0.173 4.173 10 C -0.158 4.158 11 C 0.040 3.960 12 H 0.082 0.918 13 N -0.354 5.354 14 C 0.344 3.656 15 O -0.449 6.449 16 C -0.187 4.187 17 C 0.112 3.888 18 F -0.112 7.112 19 C -0.173 4.173 20 C -0.092 4.092 21 C -0.100 4.100 22 C -0.181 4.181 23 O -0.371 6.371 24 Si 0.669 3.331 25 C -0.036 4.036 26 C -0.150 4.150 27 C -0.149 4.149 28 H 0.078 0.922 29 H 0.079 0.921 30 H 0.074 0.926 31 H 0.091 0.909 32 H 0.072 0.928 33 H 0.079 0.921 34 H 0.074 0.926 35 H 0.084 0.916 36 H 0.079 0.921 37 H 0.067 0.933 38 H 0.080 0.920 39 H 0.073 0.927 40 H 0.086 0.914 41 H 0.065 0.935 42 H 0.105 0.895 43 H 0.256 0.744 44 H 0.180 0.820 45 H 0.158 0.842 46 H 0.129 0.871 47 H 0.259 0.741 48 H -0.212 1.212 49 H -0.225 1.225 50 H 0.189 0.811 51 H 0.105 0.895 52 H 0.116 0.884 53 H 0.104 0.896 54 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -10.649 -2.438 -1.511 11.029 hybrid contribution 0.988 0.149 -0.322 1.050 sum -9.662 -2.289 -1.833 10.097 Atomic orbital electron populations 1.21923 0.94589 1.02145 1.02154 1.21044 0.96414 0.96364 0.97336 1.21839 1.01009 0.95585 1.02160 1.21559 1.01280 0.93295 0.98782 1.22712 0.98564 0.92912 0.87536 1.87896 1.79223 1.21998 1.43127 1.22205 0.97022 0.80357 0.97141 0.90340 1.21938 0.99502 0.94473 1.01375 1.21791 1.02483 0.95190 0.96313 1.21073 0.99642 0.78792 0.96533 0.91792 1.45785 1.09922 1.05821 1.73835 1.18215 0.85334 0.85882 0.76184 1.90846 1.20907 1.82333 1.50841 1.20154 0.94786 0.92718 1.11091 1.18099 0.78140 0.93299 0.99218 1.91563 1.34736 1.92116 1.92764 1.21266 0.98634 0.93720 1.03677 1.21173 0.91945 0.99863 0.96266 1.19758 0.95558 0.93249 1.01433 1.24674 0.90430 1.11119 0.91888 1.86431 1.32831 1.77528 1.40327 0.94170 0.89001 0.73251 0.76632 1.21271 0.93480 0.96610 0.92281 1.21725 0.97894 0.93100 1.02270 1.21511 1.03001 0.95360 0.95027 0.92234 0.92131 0.92619 0.90938 0.92780 0.92068 0.92612 0.91558 0.92092 0.93273 0.91973 0.92704 0.91363 0.93491 0.89474 0.74438 0.82022 0.84210 0.87100 0.74055 1.21219 1.22478 0.81094 0.89538 0.88423 0.89575 0.92183 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 8.95 71.98 0.64 1.00 16 2 C -0.09 0.11 2.92 -10.79 -0.03 0.07 16 3 C -0.15 0.14 9.19 71.98 0.66 0.80 16 4 C -0.11 -0.10 5.05 30.60 0.15 0.06 16 5 C 0.06 0.04 5.50 71.98 0.40 0.44 16 6 O -0.40 -1.78 9.99 -148.98 -1.49 -3.27 16 7 C 0.09 0.01 2.61 30.60 0.08 0.09 16 8 H 0.08 -0.26 7.79 -2.39 -0.02 -0.28 16 9 C -0.13 -0.29 5.54 30.60 0.17 -0.12 16 10 C -0.12 -0.17 5.49 30.59 0.17 0.00 16 11 C 0.14 0.16 2.45 44.99 0.11 0.27 16 12 H 0.06 0.49 7.57 -2.39 -0.02 0.47 16 13 N -0.70 -0.24 5.03 -445.56 -2.24 -2.48 16 14 C 0.56 4.94 7.73 86.74 0.67 5.61 16 15 O -0.57 -10.62 15.00 -3.92 -0.06 -10.68 16 16 C -0.18 -1.10 5.88 -20.05 -0.12 -1.22 16 17 C 0.13 1.21 7.29 22.67 0.17 1.37 16 18 F -0.13 -2.05 15.55 44.97 0.70 -1.35 16 19 C -0.15 -0.59 10.01 22.28 0.22 -0.36 16 20 C -0.07 -0.09 8.66 22.31 0.19 0.10 16 21 C -0.10 0.10 5.42 -19.90 -0.11 -0.01 16 22 C -0.07 0.53 2.81 71.24 0.20 0.73 16 23 O -0.56 4.22 12.73 -148.98 -1.90 2.33 16 24 Si 0.76 -5.32 29.77 68.60 2.04 -3.27 16 25 C -0.02 0.02 9.09 22.52 0.20 0.22 16 26 C -0.11 0.54 5.39 30.61 0.17 0.70 16 27 C -0.11 0.17 5.58 30.61 0.17 0.34 16 28 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 29 H 0.06 -0.20 6.56 -2.39 -0.02 -0.22 16 30 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 31 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 32 H 0.05 -0.02 8.14 -2.39 -0.02 -0.04 16 33 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.05 -0.04 8.14 -2.38 -0.02 -0.06 16 35 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 36 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 37 H 0.05 0.00 7.87 -2.39 -0.02 -0.02 16 38 H 0.06 -0.11 6.51 -2.39 -0.02 -0.13 16 39 H 0.05 0.34 8.14 -2.39 -0.02 0.32 16 40 H 0.07 0.13 7.87 -2.39 -0.02 0.11 16 41 H 0.05 0.33 8.14 -2.39 -0.02 0.31 16 42 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 43 H 0.42 -2.94 6.64 -92.71 -0.62 -3.55 16 44 H 0.16 0.00 8.06 -2.91 -0.02 -0.03 16 45 H 0.14 -0.13 4.86 -2.91 -0.01 -0.15 16 46 H 0.11 -1.43 7.96 -2.39 -0.02 -1.45 16 47 H 0.41 -7.13 8.74 -74.05 -0.65 -7.77 16 48 H -0.29 0.44 7.11 99.48 0.71 1.14 16 49 H -0.30 -0.36 7.11 99.48 0.71 0.35 16 50 H 0.17 -1.37 6.41 -2.91 -0.02 -1.39 16 51 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 52 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 53 H 0.09 -0.25 8.14 -2.39 -0.02 -0.27 16 54 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 Total: 0.00 -24.00 426.83 0.86 -23.14 By element: Atomic # 1 Polarization: -14.20 SS G_CDS: -0.32 Total: -14.52 kcal Atomic # 6 Polarization: 5.98 SS G_CDS: 4.12 Total: 10.10 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -2.24 Total: -2.48 kcal Atomic # 8 Polarization: -8.17 SS G_CDS: -3.44 Total: -11.62 kcal Atomic # 9 Polarization: -2.05 SS G_CDS: 0.70 Total: -1.35 kcal Atomic # 14 Polarization: -5.32 SS G_CDS: 2.04 Total: -3.27 kcal Total: -24.00 0.86 -23.14 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12222500_12335834.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.619 kcal (2) G-P(sol) polarization free energy of solvation -23.997 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.140 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.759 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds