Wall clock time and date at job start Sat Mar 6 2021 17:44:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53006 * 109.46982 * 2 1 4 4 C 1.52992 * 109.47214 * 119.99952 * 2 1 3 5 5 C 1.53001 * 109.47073 * 65.00454 * 4 2 1 6 6 O 1.42901 * 109.47367 * 179.97438 * 5 4 2 7 7 C 1.42903 * 113.99972 * 179.97438 * 6 5 4 8 8 H 1.09002 * 109.47382 * 330.00104 * 7 6 5 9 9 C 1.53000 * 109.46726 * 90.00358 * 7 6 5 10 10 C 1.53001 * 109.46886 * 180.02562 * 9 7 6 11 11 C 1.53002 * 109.46963 * 299.99499 * 10 9 7 12 12 H 1.09002 * 109.47067 * 300.00341 * 11 10 9 13 13 N 1.46496 * 109.47313 * 180.02562 * 11 10 9 14 14 C 1.34773 * 120.00354 * 84.99862 * 13 11 10 15 15 O 1.21554 * 119.99824 * 0.02562 * 14 13 11 16 16 C 1.47850 * 120.00083 * 179.97438 * 14 13 11 17 17 C 1.39538 * 120.14092 * 0.02562 * 16 14 13 18 18 C 1.38074 * 119.84155 * 179.97438 * 17 16 14 19 19 Br 1.89106 * 119.93790 * 179.97438 * 18 17 16 20 20 C 1.38423 * 120.12570 * 359.97438 * 18 17 16 21 21 C 1.38367 * 120.27894 * 359.97438 * 20 18 17 22 22 C 1.50701 * 119.91704 * 179.97438 * 21 20 18 23 23 O 1.42896 * 109.47085 * 120.00316 * 22 21 20 24 24 Si 1.86302 * 109.47397 * 0.02562 * 22 21 20 25 25 C 1.37938 * 120.15904 * 359.74578 * 21 20 18 26 26 C 1.52997 * 109.47092 * 60.00194 * 11 10 9 27 27 C 1.53002 * 109.46923 * 210.00130 * 7 6 5 28 28 H 1.09005 * 109.46750 * 60.00060 * 1 2 3 29 29 H 1.09001 * 109.46837 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47454 * 300.00088 * 1 2 3 31 31 H 1.09003 * 109.47568 * 240.00316 * 2 1 3 32 32 H 1.09006 * 109.46922 * 179.97438 * 3 2 1 33 33 H 1.08998 * 109.47194 * 299.99952 * 3 2 1 34 34 H 1.09005 * 109.46911 * 60.00295 * 3 2 1 35 35 H 1.08999 * 109.47515 * 305.00576 * 4 2 1 36 36 H 1.09003 * 109.47391 * 185.00173 * 4 2 1 37 37 H 1.08999 * 109.47541 * 60.00007 * 5 4 2 38 38 H 1.09003 * 109.46783 * 300.00092 * 5 4 2 39 39 H 1.09001 * 109.47194 * 299.99575 * 9 7 6 40 40 H 1.08992 * 109.47399 * 59.99748 * 9 7 6 41 41 H 1.09000 * 109.47437 * 180.02562 * 10 9 7 42 42 H 1.09002 * 109.47508 * 59.99571 * 10 9 7 43 43 H 0.97007 * 119.99693 * 264.99991 * 13 11 10 44 44 H 1.08001 * 120.07912 * 359.95120 * 17 16 14 45 45 H 1.07997 * 119.86316 * 179.97438 * 20 18 17 46 46 H 1.09001 * 109.47148 * 240.00434 * 22 21 20 47 47 H 0.96704 * 114.00258 * 299.99680 * 23 22 21 48 48 H 1.48503 * 109.99812 * 58.68054 * 24 22 21 49 49 H 1.48495 * 110.00374 * 179.97438 * 24 22 21 50 50 H 1.08005 * 120.06531 * 180.25326 * 25 21 20 51 51 H 1.09001 * 109.47375 * 180.02562 * 26 11 10 52 52 H 1.09002 * 109.47497 * 59.99850 * 26 11 10 53 53 H 1.09002 * 109.47075 * 299.99607 * 27 7 6 54 54 H 1.08996 * 109.47407 * 60.00564 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 1.2492 5 6 1.6353 -2.1955 1.1879 6 8 2.1122 -2.8693 2.3543 7 6 1.7853 -4.2598 2.3967 8 1 0.8477 -4.4290 1.8673 9 6 2.9009 -5.0664 1.7290 10 6 2.5507 -6.5551 1.7738 11 6 2.4012 -7.0002 3.2300 12 1 3.3387 -6.8313 3.7596 13 7 2.0665 -8.4257 3.2730 14 6 3.0464 -9.3498 3.2265 15 8 4.2081 -9.0003 3.1493 16 6 2.7086 -10.7885 3.2705 17 6 1.3761 -11.1929 3.3596 18 6 1.0676 -12.5382 3.3998 19 35 -0.7372 -13.0893 3.5213 20 6 2.0770 -13.4842 3.3512 21 6 3.4000 -13.0888 3.2617 22 6 4.4924 -14.1257 3.2099 23 8 5.2267 -13.9835 1.9924 24 14 3.7376 -15.8273 3.2842 25 6 3.7210 -11.7481 3.2150 26 6 1.2857 -6.1936 3.8978 27 6 1.6362 -4.7044 3.8531 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 1.8934 -0.5138 -0.8900 32 1 3.1300 1.4426 0.0005 33 1 1.6766 1.9564 -0.8900 34 1 1.6766 1.9564 0.8901 35 1 1.6053 -0.2618 2.1369 36 1 3.1263 -0.6443 1.2951 37 1 2.0700 -2.6550 0.3002 38 1 0.5490 -2.2724 1.1419 39 1 3.0072 -4.7496 0.6914 40 1 3.8385 -4.8972 2.2583 41 1 3.3456 -7.1298 1.2985 42 1 1.6131 -6.7240 1.2441 43 1 1.1394 -8.7046 3.3350 44 1 0.5880 -10.4555 3.3975 45 1 1.8309 -14.5352 3.3833 46 1 5.1640 -13.9885 4.0575 47 1 4.6910 -14.0934 1.1948 48 1 2.7959 -16.0151 2.1514 49 1 4.8046 -16.8589 3.2333 50 1 4.7539 -11.4413 3.1410 51 1 1.1794 -6.5103 4.9353 52 1 0.3481 -6.3624 3.3682 53 1 2.5738 -4.5353 4.3825 54 1 0.8415 -4.1298 4.3289 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12222500_12335870.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:44:03 Heat of formation + Delta-G solvation = -104.352479 kcal Electronic energy + Delta-G solvation = -32319.075330 eV Core-core repulsion = 27881.707165 eV Total energy + Delta-G solvation = -4437.368165 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.124 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -41.73132 -40.58992 -39.77963 -38.28772 -37.82361 -36.93542 -34.98180 -33.62207 -33.08563 -31.90653 -30.75583 -30.45216 -29.11443 -28.05552 -27.03933 -25.45448 -24.29674 -23.68853 -22.94184 -22.80887 -21.55348 -21.13159 -20.73704 -19.20601 -18.12471 -17.78236 -17.67724 -17.39649 -16.92687 -16.66055 -16.43463 -16.29149 -16.06069 -15.81163 -15.64682 -15.13072 -15.06052 -14.96388 -14.87351 -14.52357 -14.30066 -14.23390 -14.12659 -14.01859 -13.35106 -13.30169 -13.23640 -13.06412 -13.04079 -12.86394 -12.85736 -12.41942 -12.30801 -12.21238 -12.13040 -11.96645 -11.84987 -11.78611 -11.67537 -11.55545 -11.48328 -11.40431 -11.38120 -11.18312 -10.73869 -10.47835 -10.33790 -10.11135 -9.90746 -4.98140 -0.52299 -0.16681 0.43204 1.19799 1.51779 1.54490 1.87899 1.95304 2.45614 2.62540 3.24197 3.31348 3.43355 3.58269 3.64715 3.78977 3.86818 3.88756 3.89620 3.94801 3.98584 4.04431 4.08720 4.15412 4.20561 4.23379 4.28395 4.30226 4.38592 4.41556 4.44740 4.51781 4.54267 4.58834 4.70976 4.75863 4.76798 4.81121 4.90842 4.91339 4.92590 4.98028 5.00219 5.05185 5.07073 5.08886 5.09417 5.11438 5.22635 5.25715 5.29414 5.35315 5.40950 5.42178 5.46081 6.31458 6.35952 6.40922 7.03287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.149 4.149 4 C -0.111 4.111 5 C 0.059 3.941 6 O -0.403 6.403 7 C 0.089 3.911 8 H 0.076 0.924 9 C -0.134 4.134 10 C -0.120 4.120 11 C 0.144 3.856 12 H 0.068 0.932 13 N -0.706 5.706 14 C 0.560 3.440 15 O -0.573 6.573 16 C -0.136 4.136 17 C -0.043 4.043 18 C -0.099 4.099 19 Br -0.027 7.027 20 C -0.061 4.061 21 C -0.114 4.114 22 C -0.084 4.084 23 O -0.546 6.546 24 Si 0.762 3.238 25 C -0.030 4.030 26 C -0.113 4.113 27 C -0.111 4.111 28 H 0.058 0.942 29 H 0.059 0.941 30 H 0.055 0.945 31 H 0.072 0.928 32 H 0.054 0.946 33 H 0.060 0.940 34 H 0.055 0.945 35 H 0.066 0.934 36 H 0.061 0.939 37 H 0.049 0.951 38 H 0.061 0.939 39 H 0.066 0.934 40 H 0.056 0.944 41 H 0.049 0.951 42 H 0.083 0.917 43 H 0.415 0.585 44 H 0.164 0.836 45 H 0.157 0.843 46 H 0.131 0.869 47 H 0.388 0.612 48 H -0.273 1.273 49 H -0.297 1.297 50 H 0.129 0.871 51 H 0.088 0.912 52 H 0.094 0.906 53 H 0.061 0.939 54 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.756 -0.647 0.814 7.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.206 4.206 4 C -0.149 4.149 5 C -0.017 4.017 6 O -0.322 6.322 7 C 0.032 3.968 8 H 0.094 0.906 9 C -0.173 4.173 10 C -0.158 4.158 11 C 0.040 3.960 12 H 0.086 0.914 13 N -0.357 5.357 14 C 0.347 3.653 15 O -0.453 6.453 16 C -0.140 4.140 17 C -0.063 4.063 18 C -0.178 4.178 19 Br 0.058 6.942 20 C -0.080 4.080 21 C -0.115 4.115 22 C -0.193 4.193 23 O -0.354 6.354 24 Si 0.666 3.334 25 C -0.050 4.050 26 C -0.151 4.151 27 C -0.149 4.149 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.074 0.926 31 H 0.091 0.909 32 H 0.073 0.927 33 H 0.079 0.921 34 H 0.074 0.926 35 H 0.084 0.916 36 H 0.080 0.920 37 H 0.067 0.933 38 H 0.079 0.921 39 H 0.085 0.915 40 H 0.075 0.925 41 H 0.068 0.932 42 H 0.102 0.898 43 H 0.254 0.746 44 H 0.181 0.819 45 H 0.174 0.826 46 H 0.148 0.852 47 H 0.237 0.763 48 H -0.199 1.199 49 H -0.225 1.225 50 H 0.147 0.853 51 H 0.106 0.894 52 H 0.112 0.888 53 H 0.080 0.920 54 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -7.161 -1.135 0.966 7.315 hybrid contribution 0.668 0.419 -1.448 1.649 sum -6.493 -0.716 -0.482 6.550 Atomic orbital electron populations 1.21926 0.94656 1.02109 1.02142 1.21041 0.96356 0.96379 0.97358 1.21842 1.01036 0.95569 1.02147 1.21557 1.01321 0.93267 0.98755 1.22702 0.98498 0.92940 0.87560 1.87895 1.79206 1.22047 1.43097 1.22219 0.97007 0.80362 0.97234 0.90618 1.21934 0.99499 0.94555 1.01303 1.21796 1.02422 0.95138 0.96487 1.21050 0.99644 0.78937 0.96355 0.91367 1.45855 1.10102 1.05942 1.73832 1.18367 0.85119 0.86077 0.75693 1.90808 1.20957 1.82354 1.51153 1.19872 0.94176 0.92711 1.07220 1.21468 0.95551 0.95017 0.94281 1.21737 0.92265 0.95336 1.08491 1.96864 1.09124 1.90957 1.97224 1.21381 0.91050 1.00225 0.95351 1.20258 0.94503 0.94662 1.02096 1.25317 0.96853 1.06916 0.90192 1.86614 1.39291 1.93498 1.16003 0.94189 0.78764 0.71907 0.88527 1.21248 0.99813 0.91744 0.92156 1.21735 0.97927 0.93112 1.02356 1.21513 1.03028 0.95444 0.94928 0.92267 0.92178 0.92616 0.90942 0.92728 0.92094 0.92620 0.91568 0.92008 0.93274 0.92107 0.91514 0.92479 0.93199 0.89821 0.74619 0.81884 0.82612 0.85167 0.76286 1.19908 1.22486 0.85263 0.89355 0.88762 0.91970 0.89789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 8.95 71.98 0.64 1.01 16 2 C -0.09 0.13 2.92 -10.79 -0.03 0.09 16 3 C -0.15 0.18 9.19 71.98 0.66 0.84 16 4 C -0.11 -0.06 5.05 30.59 0.15 0.10 16 5 C 0.06 0.02 5.50 71.98 0.40 0.42 16 6 O -0.40 -1.56 9.99 -148.98 -1.49 -3.05 16 7 C 0.09 -0.05 2.61 30.60 0.08 0.03 16 8 H 0.08 -0.27 7.79 -2.39 -0.02 -0.29 16 9 C -0.13 -0.13 5.54 30.59 0.17 0.04 16 10 C -0.12 0.02 5.49 30.60 0.17 0.19 16 11 C 0.14 -0.15 2.45 44.99 0.11 -0.04 16 12 H 0.07 0.33 7.57 -2.39 -0.02 0.31 16 13 N -0.71 1.71 5.03 -445.41 -2.24 -0.53 16 14 C 0.56 2.45 7.74 86.79 0.67 3.12 16 15 O -0.57 -7.75 16.01 -3.88 -0.06 -7.81 16 16 C -0.14 -0.13 5.87 -20.09 -0.12 -0.24 16 17 C -0.04 0.17 9.28 22.54 0.21 0.38 16 18 C -0.10 0.32 6.22 22.27 0.14 0.46 16 19 Br -0.03 0.10 33.69 -20.37 -0.69 -0.59 16 20 C -0.06 0.20 8.41 22.34 0.19 0.39 16 21 C -0.11 0.14 5.39 -19.90 -0.11 0.03 16 22 C -0.08 0.14 2.82 71.24 0.20 0.34 16 23 O -0.55 -1.19 12.76 -148.98 -1.90 -3.09 16 24 Si 0.76 -2.73 29.78 68.60 2.04 -0.69 16 25 C -0.03 -0.08 9.15 22.53 0.21 0.13 16 26 C -0.11 0.69 5.39 30.61 0.17 0.86 16 27 C -0.11 0.28 5.58 30.61 0.17 0.45 16 28 H 0.06 -0.16 8.14 -2.38 -0.02 -0.18 16 29 H 0.06 -0.20 6.57 -2.39 -0.02 -0.21 16 30 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 31 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 32 H 0.05 -0.04 8.14 -2.38 -0.02 -0.06 16 33 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 34 H 0.05 -0.05 8.14 -2.38 -0.02 -0.07 16 35 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 36 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.05 -0.01 7.87 -2.39 -0.02 -0.03 16 38 H 0.06 -0.11 6.51 -2.39 -0.02 -0.13 16 39 H 0.07 0.07 7.87 -2.39 -0.02 0.05 16 40 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 41 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 42 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 43 H 0.42 -3.79 6.64 -92.70 -0.62 -4.40 16 44 H 0.16 -1.60 6.40 -2.91 -0.02 -1.62 16 45 H 0.16 -1.03 4.86 -2.91 -0.01 -1.04 16 46 H 0.13 -0.38 7.96 -2.39 -0.02 -0.40 16 47 H 0.39 -1.46 8.70 -74.05 -0.64 -2.10 16 48 H -0.27 0.17 7.11 99.48 0.71 0.87 16 49 H -0.30 -1.29 7.11 99.48 0.71 -0.58 16 50 H 0.13 0.80 7.65 -2.91 -0.02 0.77 16 51 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 52 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 53 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 54 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 Total: 0.00 -17.66 443.54 -0.57 -18.23 By element: Atomic # 1 Polarization: -10.75 SS G_CDS: -0.32 Total: -11.06 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: 4.08 Total: 8.58 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -2.24 Total: -0.53 kcal Atomic # 8 Polarization: -10.50 SS G_CDS: -3.45 Total: -13.95 kcal Atomic # 14 Polarization: -2.73 SS G_CDS: 2.04 Total: -0.69 kcal Atomic # 35 Polarization: 0.10 SS G_CDS: -0.69 Total: -0.59 kcal Total: -17.66 -0.57 -18.23 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12222500_12335870.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.118 kcal (2) G-P(sol) polarization free energy of solvation -17.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.779 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.573 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.235 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds