Wall clock time and date at job start Sat Mar 6 2021 17:48:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53005 * 109.46964 * 2 1 4 4 C 1.53000 * 109.46835 * 119.99407 * 2 1 3 5 5 C 1.53007 * 109.46692 * 175.00235 * 4 2 1 6 6 O 1.42905 * 109.46919 * 179.97438 * 5 4 2 7 7 C 1.42895 * 114.00128 * 179.97438 * 6 5 4 8 8 H 1.08998 * 109.47064 * 330.01060 * 7 6 5 9 9 C 1.53006 * 109.47000 * 90.00194 * 7 6 5 10 10 C 1.52997 * 109.47164 * 180.02562 * 9 7 6 11 11 C 1.53002 * 109.46978 * 299.99874 * 10 9 7 12 12 H 1.08992 * 109.47056 * 300.00064 * 11 10 9 13 13 N 1.46505 * 109.46958 * 180.02562 * 11 10 9 14 14 C 1.34777 * 119.99797 * 84.99979 * 13 11 10 15 15 O 1.21636 * 119.99846 * 0.02562 * 14 13 11 16 16 C 1.47191 * 119.99582 * 179.97438 * 14 13 11 17 17 C 1.36005 * 123.46505 * 359.71123 * 16 14 13 18 18 S 1.70443 * 110.81653 * 179.89110 * 17 16 14 19 19 C 1.75500 * 92.44633 * 0.31534 * 18 17 16 20 20 C 1.50709 * 124.71307 * 179.78275 * 19 18 17 21 21 O 1.42900 * 109.47074 * 120.04159 * 20 19 18 22 22 Si 1.86299 * 109.46818 * 0.04427 * 20 19 18 23 23 C 1.32770 * 110.57550 * 359.82158 * 19 18 17 24 24 C 1.52996 * 109.46891 * 60.00410 * 11 10 9 25 25 C 1.52997 * 109.47503 * 210.00358 * 7 6 5 26 26 H 1.09000 * 109.47756 * 300.00311 * 1 2 3 27 27 H 1.09003 * 109.46956 * 60.00562 * 1 2 3 28 28 H 1.09007 * 109.47124 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47389 * 240.00063 * 2 1 3 30 30 H 1.08996 * 109.47009 * 179.97438 * 3 2 1 31 31 H 1.09003 * 109.46825 * 299.99518 * 3 2 1 32 32 H 1.09000 * 109.47138 * 59.99311 * 3 2 1 33 33 H 1.08995 * 109.47343 * 55.01020 * 4 2 1 34 34 H 1.08996 * 109.47286 * 295.00299 * 4 2 1 35 35 H 1.09001 * 109.47084 * 60.00797 * 5 4 2 36 36 H 1.08996 * 109.47307 * 300.00051 * 5 4 2 37 37 H 1.09001 * 109.47002 * 59.99969 * 9 7 6 38 38 H 1.09000 * 109.47050 * 300.00235 * 9 7 6 39 39 H 1.09002 * 109.47045 * 180.02562 * 10 9 7 40 40 H 1.09001 * 109.47375 * 59.99966 * 10 9 7 41 41 H 0.97001 * 119.99745 * 265.00017 * 13 11 10 42 42 H 1.07996 * 124.59013 * 359.97438 * 17 16 14 43 43 H 1.09000 * 109.46936 * 240.04360 * 20 19 18 44 44 H 0.96699 * 114.00055 * 300.00408 * 21 20 19 45 45 H 1.48494 * 110.00207 * 58.67833 * 22 20 19 46 46 H 1.48502 * 109.99635 * 180.02562 * 22 20 19 47 47 H 1.08005 * 123.45610 * 179.97438 * 23 19 18 48 48 H 1.09004 * 109.47368 * 179.97438 * 24 11 10 49 49 H 1.09001 * 109.47372 * 59.99964 * 24 11 10 50 50 H 1.09002 * 109.47153 * 60.00043 * 25 7 6 51 51 H 1.09001 * 109.46832 * 300.00234 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0399 -0.7211 1.2493 5 6 3.5648 -0.8309 1.1881 6 8 4.0412 -1.5039 2.3552 7 6 5.4610 -1.6601 2.3973 8 1 5.8485 -1.7351 1.3813 9 6 6.0868 -0.4499 3.0937 10 6 7.6069 -0.6169 3.1383 11 6 7.9578 -1.8889 3.9128 12 1 7.5706 -1.8140 4.9288 13 7 9.4135 -2.0484 3.9559 14 6 10.1318 -1.4239 4.9102 15 8 9.5714 -0.7284 5.7358 16 6 11.5943 -1.5847 4.9538 17 6 12.2914 -2.3496 4.0714 18 16 13.9599 -2.3041 4.4165 19 6 13.7234 -1.2370 5.7895 20 6 14.8282 -0.7180 6.6735 21 8 14.8480 0.7099 6.6225 22 14 16.4635 -1.3833 6.0787 23 6 12.4358 -0.9511 5.9419 24 6 7.3321 -3.0989 3.2163 25 6 5.8114 -2.9320 3.1721 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8934 -0.5138 -0.8900 30 1 3.1299 1.4426 0.0005 31 1 1.6766 1.9563 -0.8901 32 1 1.6765 1.9564 0.8899 33 1 1.6054 -1.7197 1.2953 34 1 1.7515 -0.1582 2.1370 35 1 3.9994 0.1677 1.1422 36 1 3.8532 -1.3938 0.3004 37 1 5.6992 -0.3749 4.1098 38 1 5.8371 0.4562 2.5418 39 1 8.0527 0.2450 3.6348 40 1 7.9942 -0.6917 2.1221 41 1 9.8603 -2.6034 3.2977 42 1 11.8479 -2.9088 3.2609 43 1 14.6553 -1.0426 7.6996 44 1 14.9976 1.0699 5.7375 45 1 16.6963 -0.9744 4.6703 46 1 17.5613 -0.8793 6.9426 47 1 12.0566 -0.3108 6.7247 48 1 7.5825 -4.0052 3.7678 49 1 7.7194 -3.1738 2.2002 50 1 5.3656 -3.7941 2.6759 51 1 5.4239 -2.8569 4.1881 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12222500_6894386.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:48:31 Heat of formation + Delta-G solvation = -110.768062 kcal Electronic energy + Delta-G solvation = -28668.069191 eV Core-core repulsion = 24659.393075 eV Total energy + Delta-G solvation = -4008.676116 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.170 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.27038 -40.09064 -38.95533 -38.21468 -37.18417 -36.82808 -34.73409 -32.01383 -31.91337 -30.68524 -29.05399 -28.11381 -27.00102 -25.66116 -24.30726 -23.71415 -23.03192 -21.85722 -21.36182 -20.84802 -20.28489 -19.07222 -18.06754 -17.87350 -17.74070 -16.99962 -16.81666 -16.49766 -16.42587 -15.86669 -15.69133 -15.56003 -15.28735 -14.91745 -14.90630 -14.79426 -14.52362 -14.13974 -14.07982 -13.79606 -13.66882 -13.55577 -13.50788 -13.29374 -13.13399 -12.95102 -12.68571 -12.65387 -12.41673 -12.38925 -12.24843 -12.21339 -11.84974 -11.77199 -11.66085 -11.55455 -11.45352 -11.41782 -10.92777 -10.74743 -10.38373 -10.11675 -10.00716 -9.52930 -5.15212 -0.38877 0.31182 0.65814 0.88969 1.15855 1.48607 1.83841 2.06055 2.36796 2.62414 3.21759 3.49070 3.55673 3.62739 3.79747 3.85554 3.88641 3.93477 3.97708 4.00174 4.10820 4.13305 4.20215 4.25727 4.26088 4.36799 4.37908 4.43810 4.44762 4.50820 4.59180 4.66351 4.69219 4.71794 4.77664 4.87875 4.89035 4.93447 4.97351 5.01883 5.04712 5.06406 5.06520 5.11680 5.19041 5.23223 5.26106 5.28381 5.36854 5.42533 5.47000 6.27012 6.31935 6.44946 7.21912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.095 4.095 3 C -0.152 4.152 4 C -0.114 4.114 5 C 0.060 3.940 6 O -0.382 6.382 7 C 0.090 3.910 8 H 0.060 0.940 9 C -0.138 4.138 10 C -0.127 4.127 11 C 0.144 3.856 12 H 0.094 0.906 13 N -0.724 5.724 14 C 0.578 3.422 15 O -0.530 6.530 16 C -0.156 4.156 17 C -0.207 4.207 18 S 0.197 5.803 19 C -0.242 4.242 20 C -0.033 4.033 21 O -0.522 6.522 22 Si 0.650 3.350 23 C -0.054 4.054 24 C -0.123 4.123 25 C -0.112 4.112 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.070 0.930 30 H 0.055 0.945 31 H 0.056 0.944 32 H 0.057 0.943 33 H 0.071 0.929 34 H 0.071 0.929 35 H 0.050 0.950 36 H 0.047 0.953 37 H 0.075 0.925 38 H 0.067 0.933 39 H 0.073 0.927 40 H 0.064 0.936 41 H 0.398 0.602 42 H 0.171 0.829 43 H 0.128 0.872 44 H 0.378 0.622 45 H -0.239 1.239 46 H -0.234 1.234 47 H 0.157 0.843 48 H 0.078 0.922 49 H 0.070 0.930 50 H 0.076 0.924 51 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.953 -4.304 -4.910 6.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.113 4.113 3 C -0.210 4.210 4 C -0.152 4.152 5 C -0.016 4.016 6 O -0.301 6.301 7 C 0.032 3.968 8 H 0.078 0.922 9 C -0.176 4.176 10 C -0.165 4.165 11 C 0.040 3.960 12 H 0.112 0.888 13 N -0.375 5.375 14 C 0.364 3.636 15 O -0.407 6.407 16 C -0.174 4.174 17 C -0.345 4.345 18 S 0.464 5.536 19 C -0.359 4.359 20 C -0.145 4.145 21 O -0.329 6.329 22 Si 0.549 3.451 23 C -0.083 4.083 24 C -0.161 4.161 25 C -0.150 4.150 26 H 0.075 0.925 27 H 0.076 0.924 28 H 0.075 0.925 29 H 0.089 0.911 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.076 0.924 33 H 0.089 0.911 34 H 0.090 0.910 35 H 0.069 0.931 36 H 0.065 0.935 37 H 0.094 0.906 38 H 0.086 0.914 39 H 0.092 0.908 40 H 0.083 0.917 41 H 0.233 0.767 42 H 0.188 0.812 43 H 0.146 0.854 44 H 0.226 0.774 45 H -0.163 1.163 46 H -0.157 1.157 47 H 0.174 0.826 48 H 0.096 0.904 49 H 0.089 0.911 50 H 0.095 0.905 51 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 3.394 -4.401 -4.500 7.151 hybrid contribution -1.310 1.478 -0.521 2.043 sum 2.083 -2.923 -5.021 6.172 Atomic orbital electron populations 1.21831 0.94630 1.01983 1.02064 1.21058 0.96224 0.96334 0.97725 1.21937 1.00993 0.95908 1.02130 1.21590 0.93392 1.01584 0.98620 1.22639 0.95321 0.96132 0.87511 1.87910 1.21081 1.78509 1.42608 1.22120 0.81159 0.94798 0.98685 0.92204 1.21991 0.94703 0.98462 1.02493 1.21878 0.95711 0.98351 1.00588 1.21064 0.78897 0.94789 1.01237 0.88837 1.45910 1.07853 1.51308 1.32404 1.17617 0.85775 0.79383 0.80815 1.90830 1.71922 1.38707 1.39225 1.20274 0.94214 1.03711 0.99175 1.25793 1.00340 1.04243 1.04107 1.83105 1.02742 1.44136 1.23646 1.24752 0.99290 1.08082 1.03741 1.24414 1.03399 0.83975 1.02704 1.86647 1.93750 1.17734 1.34737 0.95321 0.76957 0.91450 0.81397 1.21056 0.90639 0.98333 0.98248 1.21781 0.95326 0.97771 1.01257 1.21514 0.94495 0.97082 1.01948 0.92475 0.92449 0.92520 0.91119 0.92639 0.92504 0.92424 0.91074 0.91001 0.93139 0.93517 0.90595 0.91437 0.90840 0.91697 0.76741 0.81162 0.85413 0.77431 1.16320 1.15664 0.82592 0.90372 0.91138 0.90532 0.90487 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.10 9.19 37.16 0.34 0.44 16 2 C -0.09 0.06 2.92 -90.62 -0.26 -0.21 16 3 C -0.15 0.11 8.95 37.16 0.33 0.44 16 4 C -0.11 -0.02 5.05 -26.73 -0.14 -0.15 16 5 C 0.06 0.02 5.50 37.16 0.20 0.23 16 6 O -0.38 -0.75 9.99 -35.23 -0.35 -1.10 16 7 C 0.09 0.00 2.61 -26.73 -0.07 -0.07 16 8 H 0.06 -0.05 7.79 -51.93 -0.40 -0.45 16 9 C -0.14 -0.05 5.54 -26.73 -0.15 -0.19 16 10 C -0.13 -0.01 5.49 -26.73 -0.15 -0.16 16 11 C 0.14 -0.03 2.45 -67.93 -0.17 -0.19 16 12 H 0.09 0.19 7.57 -51.93 -0.39 -0.20 16 13 N -0.72 0.36 5.05 -54.95 -0.28 0.09 16 14 C 0.58 1.53 7.76 -12.62 -0.10 1.43 16 15 O -0.53 -3.54 16.46 5.25 0.09 -3.45 16 16 C -0.16 -0.17 5.98 -104.63 -0.63 -0.79 16 17 C -0.21 0.35 10.38 29.93 0.31 0.66 16 18 S 0.20 -0.38 20.18 -107.50 -2.17 -2.55 16 19 C -0.24 0.04 5.68 -36.18 -0.21 -0.16 16 20 C -0.03 0.02 2.95 36.01 0.11 0.13 16 21 O -0.52 -0.52 12.85 -35.23 -0.45 -0.97 16 22 Si 0.65 -1.02 30.91 -169.99 -5.25 -6.27 16 23 C -0.05 -0.09 9.91 -39.02 -0.39 -0.47 16 24 C -0.12 0.26 5.39 -26.71 -0.14 0.12 16 25 C -0.11 0.09 5.58 -26.71 -0.15 -0.06 16 26 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.04 8.14 -51.92 -0.42 -0.46 16 29 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.05 -0.05 6.56 -51.93 -0.34 -0.39 16 31 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.05 0.00 6.29 -51.93 -0.33 -0.33 16 36 H 0.05 -0.01 8.08 -51.93 -0.42 -0.43 16 37 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 38 H 0.07 0.02 7.87 -51.93 -0.41 -0.39 16 39 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 40 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 41 H 0.40 -1.34 7.10 -40.82 -0.29 -1.63 16 42 H 0.17 -0.79 7.01 -52.49 -0.37 -1.16 16 43 H 0.13 -0.17 7.96 -51.93 -0.41 -0.58 16 44 H 0.38 -0.73 8.70 45.56 0.40 -0.34 16 45 H -0.24 0.02 7.11 56.52 0.40 0.42 16 46 H -0.23 -0.31 7.11 56.52 0.40 0.09 16 47 H 0.16 0.43 8.06 -52.48 -0.42 0.00 16 48 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 49 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 50 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 51 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 416.11 15.07 6.27 6.27 Total: 0.00 -6.85 416.11 -12.32 -19.17 By element: Atomic # 1 Polarization: -3.22 SS G_CDS: -8.93 Total: -12.15 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -1.24 Total: 0.97 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.28 Total: 0.09 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -0.72 Total: -5.52 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.25 Total: -6.27 kcal Atomic # 16 Polarization: -0.38 SS G_CDS: -2.17 Total: -2.55 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -6.85 -12.32 -19.17 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12222500_6894386.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.595 kcal (2) G-P(sol) polarization free energy of solvation -6.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.323 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.173 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.768 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds