Wall clock time and date at job start Sat Mar 6 2021 20:18:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86310 * 109.47132 * 2 1 4 4 C 1.50699 * 109.47216 * 119.99735 * 2 1 3 5 5 C 1.38414 * 119.89352 * 244.97770 * 4 2 1 6 6 C 1.38248 * 120.34139 * 179.97438 * 5 4 2 7 7 C 1.38281 * 120.11126 * 359.76615 * 6 5 4 8 8 F 1.35107 * 120.10355 * 180.25716 * 7 6 5 9 9 C 1.39853 * 119.78575 * 0.53206 * 7 6 5 10 10 C 1.47698 * 120.17078 * 179.72044 * 9 7 6 11 11 O 1.21568 * 119.99886 * 359.72904 * 10 9 7 12 12 N 1.34778 * 120.00059 * 179.72521 * 10 9 7 13 13 C 1.46499 * 119.99771 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47397 * 325.00275 * 13 12 10 15 15 C 1.53002 * 109.46799 * 85.00174 * 13 12 10 16 16 C 1.52997 * 109.46817 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47452 * 300.00239 * 16 15 13 18 18 H 1.09002 * 109.46935 * 300.00125 * 17 16 15 19 19 C 1.53002 * 109.47197 * 180.02562 * 17 16 15 20 20 F 1.39904 * 109.47131 * 59.99938 * 19 17 16 21 21 F 1.39905 * 109.46706 * 179.97438 * 19 17 16 22 22 F 1.39895 * 109.46904 * 299.99445 * 19 17 16 23 23 C 1.52999 * 109.47159 * 59.99536 * 17 16 15 24 24 C 1.52997 * 109.47317 * 300.00546 * 23 17 16 25 25 C 1.37901 * 119.89116 * 65.00132 * 4 2 1 26 26 H 0.96705 * 114.00276 * 60.00161 * 1 2 3 27 27 H 1.08996 * 109.47262 * 240.00130 * 2 1 3 28 28 H 1.48502 * 109.99662 * 298.68002 * 3 2 1 29 29 H 1.48499 * 109.99755 * 59.99785 * 3 2 1 30 30 H 1.07998 * 119.83128 * 0.02562 * 5 4 2 31 31 H 1.07997 * 119.94106 * 180.02562 * 6 5 4 32 32 H 0.97006 * 119.99662 * 0.02562 * 12 10 9 33 33 H 1.08993 * 109.47662 * 299.99952 * 15 13 12 34 34 H 1.09002 * 109.47075 * 60.00457 * 15 13 12 35 35 H 1.09002 * 109.47153 * 60.00231 * 16 15 13 36 36 H 1.09001 * 109.47289 * 180.02562 * 16 15 13 37 37 H 1.08996 * 109.46929 * 179.97438 * 23 17 16 38 38 H 1.09002 * 109.46716 * 60.00455 * 23 17 16 39 39 H 1.09002 * 109.47153 * 299.99641 * 24 23 17 40 40 H 1.09001 * 109.46832 * 179.97438 * 24 23 17 41 41 H 1.08003 * 120.05453 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6398 -0.0092 2.1908 6 6 3.1045 -0.6515 3.3235 7 6 2.8594 -2.0001 3.5060 8 9 3.3091 -2.6265 4.6154 9 6 2.1495 -2.7148 2.5359 10 6 1.8882 -4.1568 2.7193 11 8 2.2948 -4.7266 3.7132 12 7 1.1989 -4.8410 1.7848 13 6 0.9403 -6.2715 1.9665 14 1 1.7910 -6.7339 2.4669 15 6 -0.3162 -6.4582 2.8193 16 6 -0.5866 -7.9522 3.0086 17 6 -0.7947 -8.6099 1.6429 18 1 -1.6455 -8.1472 1.1426 19 6 -1.0658 -10.1038 1.8322 20 9 -2.2150 -10.2741 2.6118 21 9 -1.2566 -10.7050 0.5835 22 9 0.0258 -10.6980 2.4744 23 6 0.4617 -8.4231 0.7901 24 6 0.7322 -6.9291 0.6008 25 6 1.6840 -2.0569 1.3957 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5138 -0.8899 28 1 1.5878 2.4586 -1.2243 29 1 1.5614 2.4679 1.2085 30 1 2.8298 1.0452 2.0551 31 1 3.6562 -0.0981 4.0689 32 1 0.8747 -4.3864 0.9916 33 1 -0.1682 -5.9894 3.7921 34 1 -1.1670 -5.9959 2.3188 35 1 0.2641 -8.4149 3.5089 36 1 -1.4820 -8.0853 3.6158 37 1 0.3136 -8.8920 -0.1826 38 1 1.3124 -8.8858 1.2903 39 1 -0.1186 -6.4664 0.1006 40 1 1.6276 -6.7961 -0.0064 41 1 1.1316 -2.6016 0.6444 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_12335834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:18:02 Heat of formation + Delta-G solvation = -245.557596 kcal Electronic energy + Delta-G solvation = -30905.182290 eV Core-core repulsion = 25864.525780 eV Total energy + Delta-G solvation = -5040.656509 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.114 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -51.04996 -49.84052 -48.53106 -48.50980 -41.48081 -40.32937 -39.15580 -37.75600 -35.62631 -33.15092 -32.53451 -32.11671 -31.15937 -26.79992 -26.68471 -25.26184 -24.13477 -23.48538 -22.45102 -21.61556 -21.16158 -19.38712 -19.20669 -19.06998 -18.78032 -18.62360 -18.23205 -17.90485 -17.04386 -16.77185 -16.49275 -16.10118 -15.86512 -15.74211 -15.65275 -15.53284 -15.18572 -15.13108 -14.91280 -14.74109 -14.68862 -14.67559 -14.54511 -14.43719 -14.19580 -13.88750 -13.84488 -13.61872 -13.47425 -13.32753 -12.82888 -12.61785 -12.55228 -12.41672 -12.14048 -11.90843 -11.79266 -11.56819 -11.00256 -10.69337 -10.41125 -10.15383 -9.83990 -5.13880 -0.50570 -0.09600 1.06634 1.42457 1.64292 1.73136 1.78711 1.94513 2.44898 2.78180 2.91177 2.99444 3.02163 3.05524 3.34922 3.40724 3.50427 3.55465 3.58752 3.77620 3.84955 3.92066 3.96553 4.00194 4.06028 4.11366 4.13784 4.20015 4.41359 4.44355 4.51662 4.64912 4.71839 4.74818 4.79224 4.84775 4.85662 4.90792 5.04731 5.06919 5.10997 5.35304 5.53576 6.21724 6.33311 7.10552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.075 4.075 3 Si 0.682 3.318 4 C -0.093 4.093 5 C -0.058 4.058 6 C -0.156 4.156 7 C 0.167 3.833 8 F -0.111 7.111 9 C -0.176 4.176 10 C 0.561 3.439 11 O -0.518 6.518 12 N -0.722 5.722 13 C 0.143 3.857 14 H 0.095 0.905 15 C -0.126 4.126 16 C -0.117 4.117 17 C -0.134 4.134 18 H 0.116 0.884 19 C 0.453 3.547 20 F -0.183 7.183 21 F -0.184 7.184 22 F -0.181 7.181 23 C -0.116 4.116 24 C -0.122 4.122 25 C -0.030 4.030 26 H 0.383 0.617 27 H 0.081 0.919 28 H -0.258 1.258 29 H -0.252 1.252 30 H 0.142 0.858 31 H 0.151 0.849 32 H 0.400 0.600 33 H 0.079 0.921 34 H 0.070 0.930 35 H 0.081 0.919 36 H 0.082 0.918 37 H 0.084 0.916 38 H 0.082 0.918 39 H 0.075 0.925 40 H 0.081 0.919 41 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.005 5.041 -6.372 8.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.184 4.184 3 Si 0.583 3.417 4 C -0.094 4.094 5 C -0.076 4.076 6 C -0.175 4.175 7 C 0.147 3.853 8 F -0.089 7.089 9 C -0.180 4.180 10 C 0.348 3.652 11 O -0.394 6.394 12 N -0.375 5.375 13 C 0.039 3.961 14 H 0.114 0.886 15 C -0.165 4.165 16 C -0.155 4.155 17 C -0.153 4.153 18 H 0.135 0.865 19 C 0.399 3.601 20 F -0.164 7.164 21 F -0.165 7.165 22 F -0.163 7.163 23 C -0.154 4.154 24 C -0.160 4.160 25 C -0.049 4.049 26 H 0.231 0.769 27 H 0.099 0.901 28 H -0.183 1.183 29 H -0.177 1.177 30 H 0.159 0.841 31 H 0.169 0.831 32 H 0.236 0.764 33 H 0.098 0.902 34 H 0.089 0.911 35 H 0.100 0.900 36 H 0.101 0.899 37 H 0.103 0.897 38 H 0.101 0.899 39 H 0.093 0.907 40 H 0.100 0.900 41 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 1.194 5.074 -5.042 7.252 hybrid contribution -1.383 -0.299 -0.735 1.594 sum -0.189 4.775 -5.777 7.497 Atomic orbital electron populations 1.86580 1.17499 1.80230 1.50049 1.24752 0.84737 1.11172 0.97763 0.95028 0.91527 0.74381 0.80741 1.19191 1.00203 0.93705 0.96268 1.21084 0.94711 0.99942 0.91842 1.21150 1.03700 0.92629 1.00004 1.17740 0.94047 0.90441 0.83120 1.91633 1.85907 1.82321 1.48994 1.20033 1.06012 0.94587 0.97357 1.17966 0.78147 0.85911 0.83197 1.90876 1.50522 1.69726 1.28240 1.45909 1.57179 1.10320 1.24052 1.21079 0.98790 0.79999 0.96281 0.88649 1.21883 0.97727 0.95305 1.01539 1.21584 1.03993 0.95814 0.94093 1.22572 1.02940 0.88849 1.00976 0.86548 1.20602 0.74119 0.91612 0.73762 1.93195 1.51228 1.96476 1.75536 1.93192 1.95049 1.86081 1.42182 1.93186 1.54645 1.86275 1.82144 1.21557 0.96229 0.97059 1.00521 1.21753 1.03232 0.94698 0.96330 1.20989 0.94960 0.93850 0.95067 0.76864 0.90095 1.18296 1.17677 0.84053 0.83148 0.76443 0.90240 0.91120 0.89999 0.89945 0.89693 0.89922 0.90683 0.90038 0.84507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.85 12.81 -35.23 -0.45 0.40 16 2 C -0.07 0.21 2.79 36.01 0.10 0.31 16 3 Si 0.68 -2.16 29.84 -169.99 -5.07 -7.23 16 4 C -0.09 0.13 5.38 -104.68 -0.56 -0.43 16 5 C -0.06 0.10 8.66 -39.51 -0.34 -0.24 16 6 C -0.16 0.10 10.01 -39.56 -0.40 -0.30 16 7 C 0.17 0.34 7.29 -38.96 -0.28 0.06 16 8 F -0.11 -0.52 15.55 2.25 0.04 -0.49 16 9 C -0.18 -0.21 5.88 -104.91 -0.62 -0.83 16 10 C 0.56 1.34 7.73 -12.40 -0.10 1.24 16 11 O -0.52 -3.30 15.00 5.31 0.08 -3.22 16 12 N -0.72 0.81 5.03 -54.80 -0.28 0.53 16 13 C 0.14 -0.19 2.45 -67.93 -0.17 -0.36 16 14 H 0.10 0.06 7.58 -51.93 -0.39 -0.33 16 15 C -0.13 0.15 5.49 -26.73 -0.15 0.00 16 16 C -0.12 0.16 4.96 -26.73 -0.13 0.03 16 17 C -0.13 0.26 2.16 -90.62 -0.20 0.07 16 18 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 19 C 0.45 0.24 2.69 37.16 0.10 0.34 16 20 F -0.18 -0.34 16.80 2.25 0.04 -0.30 16 21 F -0.18 -0.26 16.80 2.25 0.04 -0.22 16 22 F -0.18 -0.32 16.28 2.25 0.04 -0.28 16 23 C -0.12 0.32 4.96 -26.73 -0.13 0.18 16 24 C -0.12 0.43 5.39 -26.73 -0.14 0.29 16 25 C -0.03 0.04 9.17 -39.19 -0.36 -0.32 16 26 H 0.38 -2.02 8.74 45.56 0.40 -1.63 16 27 H 0.08 -0.39 7.96 -51.93 -0.41 -0.81 16 28 H -0.26 0.22 7.11 56.52 0.40 0.62 16 29 H -0.25 0.02 7.04 56.52 0.40 0.42 16 30 H 0.14 -0.53 4.84 -52.49 -0.25 -0.78 16 31 H 0.15 -0.40 8.06 -52.49 -0.42 -0.82 16 32 H 0.40 -1.51 6.63 -40.82 -0.27 -1.78 16 33 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.08 -0.05 7.80 -51.93 -0.41 -0.46 16 36 H 0.08 -0.11 7.80 -51.93 -0.41 -0.51 16 37 H 0.08 -0.26 7.80 -51.93 -0.41 -0.67 16 38 H 0.08 -0.17 7.80 -51.93 -0.41 -0.58 16 39 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 40 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 41 H 0.14 -0.49 6.40 -52.48 -0.34 -0.83 16 LS Contribution 349.42 15.07 5.27 5.27 Total: 0.00 -8.56 349.42 -8.31 -16.87 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -4.63 Total: -11.36 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: -3.38 Total: 0.04 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -0.28 Total: 0.53 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -0.37 Total: -2.82 kcal Atomic # 9 Polarization: -1.44 SS G_CDS: 0.15 Total: -1.29 kcal Atomic # 14 Polarization: -2.16 SS G_CDS: -5.07 Total: -7.23 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -8.56 -8.31 -16.87 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_12335834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -228.691 kcal (2) G-P(sol) polarization free energy of solvation -8.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -237.248 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.310 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.867 kcal (6) G-S(sol) free energy of system = (1) + (5) -245.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds