Wall clock time and date at job start Sat Mar 6 2021 20:20:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47342 * 2 1 4 4 C 1.50706 * 109.46772 * 120.00089 * 2 1 3 5 5 C 1.38246 * 119.96602 * 244.99732 * 4 2 1 6 6 C 1.38291 * 120.10740 * 179.97438 * 5 4 2 7 7 C 1.38127 * 120.05716 * 0.02562 * 6 5 4 8 8 C 1.38757 * 119.94141 * 359.96932 * 7 6 5 9 9 O 1.35902 * 120.05136 * 180.02562 * 8 7 6 10 10 C 1.42898 * 117.00292 * 0.02562 * 9 8 7 11 11 C 1.52997 * 109.47341 * 179.97438 * 10 9 8 12 12 C 1.50694 * 109.47487 * 179.97438 * 11 10 9 13 13 O 1.21287 * 119.99733 * 0.02562 * 12 11 10 14 14 N 1.34772 * 120.00565 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00618 * 179.97438 * 14 12 11 16 16 H 1.09004 * 109.46884 * 325.00770 * 15 14 12 17 17 C 1.53003 * 109.46589 * 85.00029 * 15 14 12 18 18 C 1.53006 * 109.46720 * 180.02562 * 17 15 14 19 19 C 1.52996 * 109.46954 * 300.00061 * 18 17 15 20 20 H 1.09004 * 109.47615 * 300.00152 * 19 18 17 21 21 C 1.53006 * 109.47291 * 180.02562 * 19 18 17 22 22 F 1.39904 * 109.46716 * 300.00250 * 21 19 18 23 23 F 1.39906 * 109.46879 * 59.99820 * 21 19 18 24 24 F 1.39897 * 109.47480 * 179.97438 * 21 19 18 25 25 C 1.52993 * 109.47419 * 60.00259 * 19 18 17 26 26 C 1.52996 * 109.47285 * 205.00212 * 15 14 12 27 27 C 1.38163 * 119.97459 * 64.72458 * 4 2 1 28 28 H 0.96706 * 113.99851 * 60.00423 * 1 2 3 29 29 H 1.09003 * 109.47547 * 239.99589 * 2 1 3 30 30 H 1.48497 * 110.00004 * 59.99818 * 3 2 1 31 31 H 1.48500 * 110.00023 * 181.31462 * 3 2 1 32 32 H 1.07998 * 119.94647 * 359.97438 * 5 4 2 33 33 H 1.08005 * 119.97267 * 179.97438 * 6 5 4 34 34 H 1.07998 * 120.02924 * 179.97438 * 7 6 5 35 35 H 1.09007 * 109.46836 * 299.99520 * 10 9 8 36 36 H 1.09001 * 109.47471 * 59.99283 * 10 9 8 37 37 H 1.08999 * 109.47100 * 299.99953 * 11 10 9 38 38 H 1.09001 * 109.47244 * 59.99364 * 11 10 9 39 39 H 0.97008 * 119.99416 * 0.02562 * 14 12 11 40 40 H 1.08999 * 109.47267 * 299.99924 * 17 15 14 41 41 H 1.08996 * 109.47098 * 60.00481 * 17 15 14 42 42 H 1.08997 * 109.46798 * 180.02562 * 18 17 15 43 43 H 1.08996 * 109.47208 * 60.00223 * 18 17 15 44 44 H 1.09003 * 109.47677 * 179.97438 * 25 19 18 45 45 H 1.09001 * 109.47433 * 59.99816 * 25 19 18 46 46 H 1.09001 * 109.46968 * 299.99748 * 26 15 14 47 47 H 1.08997 * 109.47201 * 60.00409 * 26 15 14 48 48 H 1.08004 * 120.02595 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.6386 -0.0117 2.1910 6 6 3.1004 -0.6606 3.3215 7 6 2.8562 -2.0092 3.4934 8 6 2.1464 -2.7127 2.5309 9 8 1.9044 -4.0395 2.6980 10 6 2.4098 -4.6462 3.8891 11 6 2.0414 -6.1311 3.9009 12 6 2.5748 -6.7710 5.1566 13 8 3.1889 -6.1048 5.9630 14 7 2.3688 -8.0833 5.3842 15 6 2.8879 -8.7056 6.6046 16 1 3.8408 -8.2471 6.8692 17 6 1.8893 -8.5010 7.7457 18 6 2.4318 -9.1504 9.0205 19 6 2.6352 -10.6481 8.7832 20 1 1.6825 -11.1069 8.5188 21 6 3.1770 -11.2976 10.0581 22 9 4.3998 -10.7089 10.3980 23 9 2.2635 -11.1106 11.1012 24 9 3.3625 -12.6672 9.8413 25 6 3.6337 -10.8526 7.6422 26 6 3.0910 -10.2033 6.3669 27 6 1.6795 -2.0583 1.4005 28 1 -0.3933 0.4417 -0.7651 29 1 1.7924 -0.5139 -0.8899 30 1 1.5615 2.4679 1.2084 31 1 3.5346 1.7702 -0.0320 32 1 2.8309 1.0427 2.0582 33 1 3.6532 -0.1126 4.0703 34 1 3.2175 -2.5156 4.3763 35 1 3.4943 -4.5403 3.9187 36 1 1.9730 -4.1568 4.7596 37 1 0.9569 -6.2366 3.8714 38 1 2.4778 -6.6207 3.0303 39 1 1.8774 -8.6160 4.7394 40 1 1.7447 -7.4340 7.9151 41 1 0.9365 -8.9594 7.4812 42 1 1.7202 -9.0051 9.8333 43 1 3.3845 -8.6917 9.2849 44 1 3.7791 -11.9196 7.4733 45 1 4.5865 -10.3939 7.9065 46 1 2.1380 -10.6616 6.1024 47 1 3.8024 -10.3490 5.5540 48 1 1.1234 -2.6028 0.6517 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:20:38 Heat of formation + Delta-G solvation = -244.994335 kcal Electronic energy + Delta-G solvation = -33280.035975 eV Core-core repulsion = 28079.100436 eV Total energy + Delta-G solvation = -5200.935539 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.154 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -51.14840 -48.63843 -48.62823 -41.53683 -41.09272 -39.49066 -39.00475 -37.33358 -35.58421 -33.50769 -32.70808 -31.96085 -31.62067 -30.73056 -27.21038 -26.61920 -25.12707 -23.99493 -23.83844 -22.88786 -21.97370 -21.53053 -21.05052 -19.41479 -19.29534 -19.16145 -18.62956 -18.40462 -17.96498 -17.61896 -17.51913 -17.39873 -16.98655 -16.21230 -15.93216 -15.76238 -15.67472 -15.38658 -15.25761 -15.16566 -15.00630 -14.84758 -14.79606 -14.78950 -14.65600 -14.55563 -14.47273 -14.25934 -14.10251 -13.69263 -13.57507 -13.44493 -13.31761 -13.01372 -12.88072 -12.51451 -12.36438 -12.25007 -12.19305 -12.10245 -11.90191 -11.81666 -11.65061 -11.46240 -11.03296 -10.39459 -10.14805 -10.02197 -9.42669 -4.94300 0.04614 0.21099 1.27576 1.50496 1.62817 1.65066 1.76573 1.97865 2.40677 2.48790 2.79550 2.93018 3.01183 3.37356 3.50688 3.56895 3.62795 3.69451 3.77818 3.81976 3.84624 3.88278 3.94035 4.07446 4.08314 4.12903 4.14284 4.20444 4.24895 4.31507 4.36517 4.37965 4.53544 4.58200 4.64524 4.69161 4.71470 4.83058 4.85940 4.94844 5.02609 5.03653 5.08177 5.17284 5.19157 5.22931 5.27257 5.44965 5.52595 6.20919 6.45912 6.90495 7.15582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.082 4.082 3 Si 0.782 3.218 4 C -0.052 4.052 5 C -0.181 4.181 6 C -0.077 4.077 7 C -0.210 4.210 8 C 0.124 3.876 9 O -0.318 6.318 10 C 0.071 3.929 11 C -0.132 4.132 12 C 0.520 3.480 13 O -0.583 6.583 14 N -0.710 5.710 15 C 0.141 3.859 16 H 0.067 0.933 17 C -0.119 4.119 18 C -0.115 4.115 19 C -0.124 4.124 20 H 0.138 0.862 21 C 0.447 3.553 22 F -0.192 7.192 23 F -0.192 7.192 24 F -0.189 7.189 25 C -0.116 4.116 26 C -0.112 4.112 27 C -0.135 4.135 28 H 0.405 0.595 29 H 0.098 0.902 30 H -0.297 1.297 31 H -0.289 1.289 32 H 0.121 0.879 33 H 0.148 0.852 34 H 0.142 0.858 35 H 0.065 0.935 36 H 0.063 0.937 37 H 0.128 0.872 38 H 0.129 0.871 39 H 0.420 0.580 40 H 0.055 0.945 41 H 0.089 0.911 42 H 0.081 0.919 43 H 0.066 0.934 44 H 0.093 0.907 45 H 0.070 0.930 46 H 0.097 0.903 47 H 0.088 0.912 48 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.017 -2.235 -7.353 8.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.191 4.191 3 Si 0.688 3.312 4 C -0.052 4.052 5 C -0.198 4.198 6 C -0.095 4.095 7 C -0.229 4.229 8 C 0.079 3.921 9 O -0.232 6.232 10 C -0.004 4.004 11 C -0.172 4.172 12 C 0.307 3.693 13 O -0.464 6.464 14 N -0.362 5.362 15 C 0.036 3.964 16 H 0.085 0.915 17 C -0.157 4.157 18 C -0.153 4.153 19 C -0.143 4.143 20 H 0.156 0.844 21 C 0.393 3.607 22 F -0.174 7.174 23 F -0.174 7.174 24 F -0.170 7.170 25 C -0.154 4.154 26 C -0.150 4.150 27 C -0.153 4.153 28 H 0.256 0.744 29 H 0.115 0.885 30 H -0.225 1.225 31 H -0.216 1.216 32 H 0.138 0.862 33 H 0.166 0.834 34 H 0.160 0.840 35 H 0.084 0.916 36 H 0.082 0.918 37 H 0.146 0.854 38 H 0.147 0.853 39 H 0.258 0.742 40 H 0.074 0.926 41 H 0.107 0.893 42 H 0.099 0.901 43 H 0.085 0.915 44 H 0.111 0.889 45 H 0.089 0.911 46 H 0.116 0.884 47 H 0.106 0.894 48 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.113 -1.672 -5.928 6.511 hybrid contribution 0.335 -0.674 0.986 1.240 sum -1.778 -2.346 -4.942 5.752 Atomic orbital electron populations 1.86449 1.16976 1.82467 1.51444 1.24897 0.86090 1.11256 0.96869 0.94420 0.77218 0.75037 0.84481 1.19527 0.96721 0.93310 0.95670 1.21008 1.03345 0.99445 0.96036 1.21159 0.97408 0.93981 0.96973 1.21530 1.04422 0.95976 1.00959 1.19123 0.95107 0.83196 0.94717 1.85958 1.74535 1.19760 1.42926 1.22491 0.99220 0.93381 0.85314 1.21438 1.05524 0.93080 0.97120 1.20601 0.78703 0.82611 0.87351 1.90750 1.42914 1.63484 1.49211 1.45874 1.57463 1.09059 1.23767 1.21037 0.97124 0.94071 0.84182 0.91451 1.21800 0.99662 1.00761 0.93511 1.21537 1.02826 0.91833 0.99144 1.22595 1.03439 0.98081 0.90203 0.84399 1.21054 0.75553 0.76671 0.87397 1.93165 1.46587 1.83935 1.93710 1.93175 1.67037 1.94982 1.62183 1.93176 1.95333 1.33734 1.94792 1.21591 0.97638 1.03133 0.93062 1.21704 1.03913 0.91918 0.97424 1.20385 1.03275 0.93921 0.97762 0.74385 0.88457 1.22538 1.21629 0.86194 0.83428 0.84004 0.91646 0.91840 0.85444 0.85340 0.74184 0.92590 0.89281 0.90079 0.91478 0.88891 0.91118 0.88405 0.89376 0.84077 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.42 12.81 -148.98 -1.91 -2.32 16 2 C -0.08 -0.05 2.79 71.24 0.20 0.14 16 3 Si 0.78 -0.96 29.85 68.60 2.05 1.09 16 4 C -0.05 -0.36 5.38 -19.88 -0.11 -0.47 16 5 C -0.18 -1.37 8.67 22.28 0.19 -1.18 16 6 C -0.08 -0.47 10.04 22.26 0.22 -0.25 16 7 C -0.21 -1.37 9.04 22.37 0.20 -1.17 16 8 C 0.12 0.94 6.69 22.51 0.15 1.09 16 9 O -0.32 -1.64 10.14 -92.44 -0.94 -2.57 16 10 C 0.07 0.12 4.03 71.98 0.29 0.41 16 11 C -0.13 0.63 6.07 29.85 0.18 0.81 16 12 C 0.52 -0.33 7.79 87.66 0.68 0.36 16 13 O -0.58 -5.21 15.65 -3.05 -0.05 -5.26 16 14 N -0.71 4.74 5.08 -442.54 -2.25 2.49 16 15 C 0.14 -0.69 2.45 44.99 0.11 -0.58 16 16 H 0.07 0.06 7.58 -2.39 -0.02 0.05 16 17 C -0.12 0.51 5.49 30.60 0.17 0.68 16 18 C -0.12 0.40 4.96 30.60 0.15 0.55 16 19 C -0.12 0.65 2.16 -10.80 -0.02 0.63 16 20 H 0.14 -1.28 8.14 -2.39 -0.02 -1.30 16 21 C 0.45 0.34 2.69 71.98 0.19 0.53 16 22 F -0.19 -0.78 16.28 44.97 0.73 -0.05 16 23 F -0.19 -0.67 16.80 44.97 0.76 0.08 16 24 F -0.19 -0.44 16.80 44.97 0.76 0.31 16 25 C -0.12 0.80 4.96 30.61 0.15 0.96 16 26 C -0.11 1.10 5.39 30.61 0.17 1.26 16 27 C -0.13 -1.01 9.62 22.36 0.22 -0.79 16 28 H 0.40 -4.19 8.74 -74.05 -0.65 -4.83 16 29 H 0.10 -0.36 7.96 -2.39 -0.02 -0.38 16 30 H -0.30 -1.90 7.05 99.48 0.70 -1.20 16 31 H -0.29 -1.23 7.11 99.48 0.71 -0.53 16 32 H 0.12 0.77 4.86 -2.91 -0.01 0.76 16 33 H 0.15 0.22 8.06 -2.91 -0.02 0.19 16 34 H 0.14 0.57 6.30 -2.91 -0.02 0.56 16 35 H 0.07 0.20 7.62 -2.38 -0.02 0.18 16 36 H 0.06 0.22 7.62 -2.39 -0.02 0.20 16 37 H 0.13 -1.07 8.14 -2.39 -0.02 -1.09 16 38 H 0.13 -1.12 8.14 -2.39 -0.02 -1.14 16 39 H 0.42 -5.62 8.60 -92.70 -0.80 -6.42 16 40 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 41 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 42 H 0.08 -0.25 7.80 -2.39 -0.02 -0.27 16 43 H 0.07 -0.04 7.80 -2.39 -0.02 -0.06 16 44 H 0.09 -0.74 7.80 -2.39 -0.02 -0.76 16 45 H 0.07 -0.31 7.80 -2.39 -0.02 -0.33 16 46 H 0.10 -1.32 8.14 -2.39 -0.02 -1.34 16 47 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 48 H 0.14 0.75 8.06 -2.91 -0.02 0.73 16 Total: 0.00 -23.75 399.39 1.90 -21.85 By element: Atomic # 1 Polarization: -18.22 SS G_CDS: -0.40 Total: -18.62 kcal Atomic # 6 Polarization: -0.16 SS G_CDS: 3.15 Total: 2.99 kcal Atomic # 7 Polarization: 4.74 SS G_CDS: -2.25 Total: 2.49 kcal Atomic # 8 Polarization: -7.26 SS G_CDS: -2.89 Total: -10.15 kcal Atomic # 9 Polarization: -1.89 SS G_CDS: 2.24 Total: 0.35 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: 2.05 Total: 1.09 kcal Total: -23.75 1.90 -21.85 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -223.148 kcal (2) G-P(sol) polarization free energy of solvation -23.746 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -246.893 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.899 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.847 kcal (6) G-S(sol) free energy of system = (1) + (5) -244.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds