Wall clock time and date at job start Sat Mar 6 2021 20:20:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38271 * 119.94563 * 119.72381 * 4 2 1 6 6 C 1.38146 * 120.05540 * 179.72476 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.57065 * 6 5 4 8 8 O 1.35895 * 120.05690 * 179.67938 * 7 6 5 9 9 C 1.42897 * 117.00208 * 0.02633 * 8 7 6 10 10 C 1.50699 * 109.47708 * 180.02562 * 9 8 7 11 11 C 1.36415 * 125.80639 * 89.99000 * 10 9 8 12 12 C 1.47381 * 127.19053 * 359.96637 * 11 10 9 13 13 O 1.21622 * 119.99714 * 359.97438 * 12 11 10 14 14 N 1.34766 * 120.00201 * 179.97438 * 12 11 10 15 15 C 1.46499 * 120.00396 * 179.97438 * 14 12 11 16 16 H 1.09006 * 109.47093 * 34.99848 * 15 14 12 17 17 C 1.52999 * 109.47662 * 154.99929 * 15 14 12 18 18 C 1.52998 * 109.47478 * 180.02562 * 17 15 14 19 19 C 1.53000 * 109.47024 * 299.99929 * 18 17 15 20 20 H 1.09001 * 109.47367 * 300.00381 * 19 18 17 21 21 C 1.52997 * 109.47340 * 180.02562 * 19 18 17 22 22 F 1.39899 * 109.47077 * 59.99695 * 21 19 18 23 23 F 1.39895 * 109.47430 * 180.02562 * 21 19 18 24 24 F 1.39904 * 109.46883 * 300.00050 * 21 19 18 25 25 C 1.52999 * 109.46935 * 59.99739 * 19 18 17 26 26 C 1.52998 * 109.47478 * 299.99984 * 25 19 18 27 27 C 1.47013 * 105.61676 * 179.97438 * 11 10 9 28 28 C 1.34178 * 105.95624 * 0.02562 * 27 11 10 29 29 O 1.33657 * 125.79801 * 269.69233 * 10 9 8 30 30 C 1.38735 * 119.89072 * 359.70511 * 7 6 5 31 31 C 1.38147 * 119.94145 * 359.97438 * 30 7 6 32 32 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 33 33 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 34 34 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 35 35 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 36 36 H 1.08003 * 119.96765 * 359.97438 * 5 4 2 37 37 H 1.08003 * 120.02771 * 180.29373 * 6 5 4 38 38 H 1.09001 * 109.46870 * 299.99559 * 9 8 7 39 39 H 1.08995 * 109.47175 * 59.99163 * 9 8 7 40 40 H 0.97001 * 119.99795 * 0.02562 * 14 12 11 41 41 H 1.08999 * 109.47167 * 300.00574 * 17 15 14 42 42 H 1.09006 * 109.46933 * 59.99821 * 17 15 14 43 43 H 1.08991 * 109.46933 * 59.99953 * 18 17 15 44 44 H 1.09001 * 109.47160 * 180.02562 * 18 17 15 45 45 H 1.09006 * 109.46933 * 60.00449 * 25 19 18 46 46 H 1.09006 * 109.47036 * 180.02562 * 25 19 18 47 47 H 1.08992 * 109.47448 * 299.99947 * 26 25 19 48 48 H 1.09001 * 109.47160 * 179.97438 * 26 25 19 49 49 H 1.08004 * 127.02387 * 180.02562 * 27 11 10 50 50 H 1.08000 * 125.43559 * 180.02562 * 28 27 11 51 51 H 1.07993 * 120.03312 * 179.97438 * 30 7 6 52 52 H 1.07997 * 119.97419 * 179.97438 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7214 -0.0355 -2.1428 6 6 3.1879 -0.6861 -3.2687 7 6 2.8531 -2.0141 -3.4896 8 8 3.3053 -2.6544 -4.5997 9 6 4.1218 -1.8992 -5.4969 10 6 4.5253 -2.7674 -6.6607 11 6 3.8355 -2.9068 -7.8294 12 6 2.5688 -2.2509 -8.1998 13 8 2.0276 -1.4898 -7.4207 14 7 2.0102 -2.4944 -9.4018 15 6 0.7507 -1.8429 -9.7699 16 1 0.7243 -0.8384 -9.3474 17 6 0.6466 -1.7580 -11.2940 18 6 -0.6684 -1.0770 -11.6783 19 6 -1.8430 -1.8908 -11.1315 20 1 -1.8170 -2.8953 -11.5538 21 6 -3.1581 -1.2102 -11.5163 22 9 -3.2529 -1.1331 -12.9099 23 9 -4.2320 -1.9540 -11.0158 24 9 -3.1918 0.0792 -10.9745 25 6 -1.7389 -1.9757 -9.6074 26 6 -0.4238 -2.6567 -9.2231 27 6 4.6197 -3.8481 -8.6419 28 6 5.6858 -4.1788 -7.8973 29 8 5.6229 -3.5274 -6.7256 30 6 2.0554 -2.6873 -2.5757 31 6 1.5970 -2.0342 -1.4480 32 1 -0.3934 0.4417 -0.7650 33 1 1.7923 -0.5138 0.8900 34 1 1.5614 2.4679 1.2086 35 1 3.5344 1.7704 -0.0321 36 1 2.9775 0.9999 -1.9728 37 1 3.8089 -0.1599 -3.9785 38 1 3.5603 -1.0396 -5.8630 39 1 5.0137 -1.5545 -4.9738 40 1 2.4417 -3.1017 -10.0231 41 1 1.4832 -1.1780 -11.6836 42 1 0.6731 -2.7625 -11.7164 43 1 -0.6944 -0.0726 -11.2559 44 1 -0.7427 -1.0170 -12.7641 45 1 -1.7649 -0.9711 -9.1849 46 1 -2.5755 -2.5558 -9.2178 47 1 -0.3978 -3.6611 -9.6454 48 1 -0.3495 -2.7167 -8.1372 49 1 4.3855 -4.2014 -9.6353 50 1 6.4718 -4.8568 -8.1955 51 1 1.7931 -3.7210 -2.7457 52 1 0.9757 -2.5576 -0.7365 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_4549634.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:20:56 Heat of formation + Delta-G solvation = -217.306941 kcal Electronic energy + Delta-G solvation = -41454.108024 eV Core-core repulsion = 35551.012487 eV Total energy + Delta-G solvation = -5903.095537 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.153 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -51.11292 -48.60621 -48.58725 -43.70788 -41.31302 -40.99718 -39.32074 -39.12233 -37.18941 -35.59144 -34.12494 -32.87429 -31.99165 -31.93505 -31.46094 -31.36598 -27.99447 -26.61220 -26.12361 -24.59653 -23.95565 -23.80468 -22.92644 -22.38984 -21.84446 -21.47617 -20.73878 -19.51740 -19.39966 -19.26017 -19.04592 -18.58437 -18.25629 -17.42175 -17.37297 -17.20733 -16.93683 -16.77602 -16.41141 -16.07857 -15.95354 -15.80131 -15.64680 -15.61062 -15.44273 -15.11177 -15.07776 -14.95076 -14.76899 -14.75915 -14.75278 -14.65022 -14.47568 -14.35574 -14.20316 -13.89623 -13.69989 -13.62733 -13.53614 -13.49416 -13.28705 -13.07977 -12.49349 -12.25522 -12.22339 -12.13960 -12.07440 -12.03900 -11.75806 -11.62419 -11.43737 -11.08980 -10.94666 -10.42510 -10.14761 -10.07627 -9.81468 -9.25012 -4.99970 -0.02410 0.25135 0.27645 1.05141 1.32451 1.52420 1.62174 1.77253 1.95015 2.07036 2.14073 2.47754 2.63161 2.82005 2.96507 3.04590 3.35104 3.53892 3.56271 3.63593 3.66422 3.67780 3.72791 3.79243 3.89905 3.90886 3.94193 4.07864 4.10684 4.12099 4.23411 4.27463 4.27695 4.39084 4.40751 4.46865 4.49393 4.53720 4.64379 4.67203 4.71852 4.81908 4.89248 4.93563 4.98012 5.05301 5.06479 5.12488 5.20178 5.23375 5.24568 5.28522 5.45803 5.46573 5.66980 5.90138 6.24461 6.48116 6.77053 7.14581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.069 4.069 3 Si 0.773 3.227 4 C -0.161 4.161 5 C -0.076 4.076 6 C -0.205 4.205 7 C 0.125 3.875 8 O -0.322 6.322 9 C 0.135 3.865 10 C 0.038 3.962 11 C -0.222 4.222 12 C 0.584 3.416 13 O -0.569 6.569 14 N -0.702 5.702 15 C 0.143 3.857 16 H 0.072 0.928 17 C -0.112 4.112 18 C -0.115 4.115 19 C -0.124 4.124 20 H 0.137 0.863 21 C 0.448 3.552 22 F -0.189 7.189 23 F -0.192 7.192 24 F -0.191 7.191 25 C -0.114 4.114 26 C -0.119 4.119 27 C -0.195 4.195 28 C -0.015 4.015 29 O -0.180 6.180 30 C -0.163 4.163 31 C -0.058 4.058 32 H 0.394 0.606 33 H 0.107 0.893 34 H -0.299 1.299 35 H -0.283 1.283 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.110 0.890 39 H 0.097 0.903 40 H 0.416 0.584 41 H 0.089 0.911 42 H 0.096 0.904 43 H 0.073 0.927 44 H 0.093 0.907 45 H 0.069 0.931 46 H 0.080 0.920 47 H 0.085 0.915 48 H 0.053 0.947 49 H 0.194 0.806 50 H 0.250 0.750 51 H 0.133 0.867 52 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.940 -2.081 -7.409 9.145 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.179 4.179 3 Si 0.679 3.321 4 C -0.161 4.161 5 C -0.094 4.094 6 C -0.223 4.223 7 C 0.080 3.920 8 O -0.237 6.237 9 C 0.061 3.939 10 C -0.015 4.015 11 C -0.226 4.226 12 C 0.372 3.628 13 O -0.449 6.449 14 N -0.354 5.354 15 C 0.039 3.961 16 H 0.090 0.910 17 C -0.149 4.149 18 C -0.153 4.153 19 C -0.144 4.144 20 H 0.155 0.845 21 C 0.394 3.606 22 F -0.170 7.170 23 F -0.174 7.174 24 F -0.173 7.173 25 C -0.152 4.152 26 C -0.157 4.157 27 C -0.213 4.213 28 C -0.080 4.080 29 O -0.076 6.076 30 C -0.181 4.181 31 C -0.076 4.076 32 H 0.244 0.756 33 H 0.124 0.876 34 H -0.227 1.227 35 H -0.210 1.210 36 H 0.167 0.833 37 H 0.166 0.834 38 H 0.128 0.872 39 H 0.115 0.885 40 H 0.253 0.747 41 H 0.107 0.893 42 H 0.115 0.885 43 H 0.091 0.909 44 H 0.112 0.888 45 H 0.088 0.912 46 H 0.098 0.902 47 H 0.104 0.896 48 H 0.071 0.929 49 H 0.211 0.789 50 H 0.266 0.734 51 H 0.151 0.849 52 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 5.269 -1.468 -5.780 7.958 hybrid contribution -0.165 -0.698 -0.106 0.725 sum 5.104 -2.166 -5.886 8.086 Atomic orbital electron populations 1.86451 1.17381 1.82183 1.50453 1.25113 0.85166 1.10704 0.96898 0.93718 0.77925 0.75626 0.84856 1.20353 1.01945 0.95461 0.98353 1.21020 0.95708 0.99899 0.92758 1.21416 1.05987 0.93792 1.01150 1.19165 0.94618 0.91880 0.86351 1.86046 1.65274 1.40672 1.31668 1.21146 0.95324 0.91355 0.86124 1.22054 0.87095 0.96166 0.96212 1.21409 0.98601 1.05678 0.96960 1.17405 0.83097 0.80265 0.81988 1.90785 1.64394 1.38321 1.51443 1.45680 1.24636 1.48239 1.16809 1.21067 0.82226 0.96611 0.96182 0.90970 1.21696 0.97477 1.03433 0.92334 1.21575 0.92117 0.99056 1.02538 1.22593 0.89406 1.02834 0.99533 0.84508 1.21024 0.88218 0.77114 0.74248 1.93176 1.96831 1.96297 1.30722 1.93172 1.60108 1.76694 1.87420 1.93166 1.96966 1.41263 1.85907 1.21524 0.98918 1.02583 0.92156 1.21789 0.92925 1.00104 1.00893 1.23266 0.95243 1.00054 1.02772 1.24910 1.02226 0.98508 0.82382 1.83792 1.38699 1.46996 1.38066 1.20620 1.01211 1.01401 0.94883 1.20931 0.97023 0.93897 0.95778 0.75578 0.87563 1.22673 1.21007 0.83327 0.83425 0.87239 0.88463 0.74663 0.89283 0.88538 0.90874 0.88801 0.91211 0.90150 0.89593 0.92858 0.78873 0.73368 0.84935 0.84369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.23 12.77 -148.98 -1.90 -3.13 16 2 C -0.07 -0.10 2.82 71.24 0.20 0.10 16 3 Si 0.77 -0.57 29.78 68.60 2.04 1.48 16 4 C -0.16 -0.46 5.39 -19.85 -0.11 -0.57 16 5 C -0.08 -0.12 8.66 22.26 0.19 0.07 16 6 C -0.20 -0.71 9.04 22.37 0.20 -0.51 16 7 C 0.12 0.90 6.69 22.51 0.15 1.05 16 8 O -0.32 -2.83 10.12 -92.37 -0.93 -3.77 16 9 C 0.13 0.57 4.74 71.24 0.34 0.91 16 10 C 0.04 0.16 7.00 25.26 0.18 0.34 16 11 C -0.22 -0.45 6.31 -18.99 -0.12 -0.57 16 12 C 0.58 2.20 7.78 86.65 0.67 2.87 16 13 O -0.57 -6.18 14.51 -4.10 -0.06 -6.24 16 14 N -0.70 2.66 5.07 -445.84 -2.26 0.39 16 15 C 0.14 -0.56 2.45 44.99 0.11 -0.45 16 16 H 0.07 0.08 7.58 -2.38 -0.02 0.06 16 17 C -0.11 1.06 5.39 30.59 0.16 1.23 16 18 C -0.11 0.82 4.96 30.59 0.15 0.97 16 19 C -0.12 0.66 2.16 -10.79 -0.02 0.63 16 20 H 0.14 -1.25 8.14 -2.39 -0.02 -1.27 16 21 C 0.45 0.23 2.69 71.98 0.19 0.42 16 22 F -0.19 -0.38 16.80 44.97 0.76 0.37 16 23 F -0.19 -0.65 16.80 44.97 0.76 0.10 16 24 F -0.19 -0.68 16.28 44.97 0.73 0.05 16 25 C -0.11 0.36 4.96 30.59 0.15 0.51 16 26 C -0.12 0.37 5.50 30.59 0.17 0.53 16 27 C -0.19 1.03 10.60 23.65 0.25 1.28 16 28 C -0.01 0.08 12.03 66.89 0.80 0.88 16 29 O -0.18 -0.35 10.52 4.45 0.05 -0.31 16 30 C -0.16 -1.06 9.99 22.37 0.22 -0.84 16 31 C -0.06 -0.27 9.60 22.25 0.21 -0.05 16 32 H 0.39 -2.12 8.70 -74.06 -0.64 -2.76 16 33 H 0.11 0.25 7.96 -2.39 -0.02 0.23 16 34 H -0.30 -1.97 7.11 99.48 0.71 -1.27 16 35 H -0.28 -0.97 7.11 99.48 0.71 -0.26 16 36 H 0.15 -0.48 4.87 -2.91 -0.01 -0.50 16 37 H 0.15 -0.10 6.30 -2.91 -0.02 -0.12 16 38 H 0.11 0.54 6.00 -2.39 -0.01 0.52 16 39 H 0.10 -0.01 7.66 -2.39 -0.02 -0.02 16 40 H 0.42 -4.18 7.77 -92.71 -0.72 -4.90 16 41 H 0.09 -0.92 8.14 -2.39 -0.02 -0.93 16 42 H 0.10 -1.27 8.14 -2.38 -0.02 -1.28 16 43 H 0.07 -0.36 7.80 -2.39 -0.02 -0.38 16 44 H 0.09 -0.78 7.80 -2.39 -0.02 -0.80 16 45 H 0.07 -0.05 7.80 -2.38 -0.02 -0.07 16 46 H 0.08 -0.22 7.80 -2.38 -0.02 -0.24 16 47 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 48 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 49 H 0.19 -2.50 7.74 -2.91 -0.02 -2.53 16 50 H 0.25 -3.53 8.06 -2.91 -0.02 -3.56 16 51 H 0.13 0.71 8.06 -2.91 -0.02 0.68 16 52 H 0.14 0.38 8.06 -2.91 -0.02 0.36 16 Total: 0.00 -24.63 436.31 2.97 -21.66 By element: Atomic # 1 Polarization: -19.12 SS G_CDS: -0.32 Total: -19.44 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 4.12 Total: 8.82 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -2.26 Total: 0.39 kcal Atomic # 8 Polarization: -10.59 SS G_CDS: -2.85 Total: -13.44 kcal Atomic # 9 Polarization: -1.71 SS G_CDS: 2.24 Total: 0.53 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: 2.04 Total: 1.48 kcal Total: -24.63 2.97 -21.66 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4549634.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -195.649 kcal (2) G-P(sol) polarization free energy of solvation -24.632 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.658 kcal (6) G-S(sol) free energy of system = (1) + (5) -217.307 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds