Wall clock time and date at job start Sat Mar 6 2021 20:21:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.47117 * 2 1 4 4 C 1.50695 * 109.47054 * 239.99742 * 2 1 3 5 5 C 1.38251 * 119.94233 * 120.00451 * 4 2 1 6 6 C 1.38163 * 120.05527 * 180.25730 * 5 4 2 7 7 C 1.38717 * 119.94355 * 359.48558 * 6 5 4 8 8 O 1.35897 * 120.05486 * 180.27938 * 7 6 5 9 9 C 1.42901 * 117.00044 * 0.20993 * 8 7 6 10 10 C 1.50701 * 109.47074 * 180.02562 * 9 8 7 11 11 O 1.21284 * 119.99727 * 359.97438 * 10 9 8 12 12 N 1.34770 * 120.00048 * 180.02562 * 10 9 8 13 13 C 1.46507 * 119.99837 * 179.97438 * 12 10 9 14 14 H 1.08997 * 109.47008 * 34.99863 * 13 12 10 15 15 C 1.53002 * 109.46760 * 154.99786 * 13 12 10 16 16 C 1.53001 * 109.46917 * 179.97438 * 15 13 12 17 17 C 1.53004 * 109.47136 * 299.99791 * 16 15 13 18 18 H 1.08995 * 109.47355 * 300.00468 * 17 16 15 19 19 C 1.52993 * 109.47159 * 179.97438 * 17 16 15 20 20 F 1.39901 * 109.47067 * 60.00228 * 19 17 16 21 21 F 1.39905 * 109.47183 * 180.02562 * 19 17 16 22 22 F 1.39902 * 109.47535 * 300.00260 * 19 17 16 23 23 C 1.53010 * 109.46861 * 60.00140 * 17 16 15 24 24 C 1.53001 * 109.47131 * 299.99862 * 23 17 16 25 25 C 1.38752 * 119.88623 * 0.48724 * 7 6 5 26 26 N 1.48001 * 120.02795 * 179.78553 * 25 7 6 27 27 O 1.21800 * 120.00550 * 179.97438 * 26 25 7 28 28 O 1.21802 * 119.99897 * 359.97438 * 26 25 7 29 29 C 1.38126 * 119.94497 * 359.77081 * 25 7 6 30 30 H 0.96698 * 114.00132 * 300.00399 * 1 2 3 31 31 H 1.09006 * 109.46750 * 120.00020 * 2 1 3 32 32 H 1.48497 * 109.99775 * 178.67816 * 3 2 1 33 33 H 1.48500 * 110.00066 * 299.99826 * 3 2 1 34 34 H 1.08002 * 119.96904 * 359.97156 * 5 4 2 35 35 H 1.07998 * 120.03041 * 179.72211 * 6 5 4 36 36 H 1.08999 * 109.46998 * 299.99535 * 9 8 7 37 37 H 1.08997 * 109.46939 * 60.00207 * 9 8 7 38 38 H 0.97001 * 120.00295 * 359.97438 * 12 10 9 39 39 H 1.08995 * 109.47417 * 300.00296 * 15 13 12 40 40 H 1.09002 * 109.46978 * 60.00580 * 15 13 12 41 41 H 1.08997 * 109.46899 * 60.00048 * 16 15 13 42 42 H 1.08999 * 109.46977 * 180.02562 * 16 15 13 43 43 H 1.09000 * 109.46549 * 59.99704 * 23 17 16 44 44 H 1.08993 * 109.47010 * 179.97438 * 23 17 16 45 45 H 1.08997 * 109.46899 * 300.00050 * 24 23 17 46 46 H 1.08999 * 109.46977 * 179.97438 * 24 23 17 47 47 H 1.08005 * 119.97036 * 179.97438 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7262 -0.0375 -2.1396 6 6 3.1836 -0.6850 -3.2712 7 6 2.8535 -2.0146 -3.4892 8 8 3.3069 -2.6553 -4.5985 9 6 4.1230 -1.9000 -5.4960 10 6 4.5279 -2.7688 -6.6589 11 8 4.1548 -3.9216 -6.7134 12 7 5.3055 -2.2652 -7.6377 13 6 5.6996 -3.1101 -8.7679 14 1 4.8860 -3.7931 -9.0119 15 6 6.0069 -2.2290 -9.9804 16 6 6.4191 -3.1112 -11.1605 17 6 7.6656 -3.9152 -10.7853 18 1 8.4789 -3.2319 -10.5410 19 6 8.0774 -4.7979 -11.9651 20 9 8.3583 -3.9927 -13.0742 21 9 9.2169 -5.5335 -11.6218 22 9 7.0334 -5.6751 -12.2781 23 6 7.3582 -4.7963 -9.5727 24 6 6.9461 -3.9141 -8.3926 25 6 2.0561 -2.6879 -2.5748 26 7 1.6982 -4.1051 -2.8067 27 8 0.9985 -4.6959 -2.0036 28 8 2.1032 -4.6807 -3.8008 29 6 1.5970 -2.0345 -1.4478 30 1 -0.3933 0.4417 0.7650 31 1 1.7923 -0.5139 0.8900 32 1 3.5346 1.7702 0.0322 33 1 1.5616 2.4679 -1.2085 34 1 2.9859 0.9966 -1.9676 35 1 3.8008 -0.1576 -3.9834 36 1 3.5608 -1.0413 -5.8631 37 1 5.0144 -1.5540 -4.9728 38 1 5.6042 -1.3434 -7.5939 39 1 5.1191 -1.6558 -10.2474 40 1 6.8206 -1.5460 -9.7363 41 1 5.6058 -3.7945 -11.4047 42 1 6.6385 -2.4835 -12.0242 43 1 6.5449 -5.4796 -9.8170 44 1 8.2461 -5.3694 -9.3057 45 1 7.7593 -3.2308 -8.1484 46 1 6.7267 -4.5418 -7.5289 47 1 0.9759 -2.5581 -0.7360 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:21:07 Heat of formation + Delta-G solvation = -228.625124 kcal Electronic energy + Delta-G solvation = -38427.592759 eV Core-core repulsion = 32551.888226 eV Total energy + Delta-G solvation = -5875.704533 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.132 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -51.07947 -48.56368 -48.53527 -43.04555 -41.83476 -41.12288 -39.86915 -39.05226 -37.59350 -37.14623 -35.69408 -33.60895 -32.56262 -32.18807 -32.06366 -29.77827 -27.63134 -26.83624 -26.29292 -24.26668 -24.15925 -23.08619 -22.67330 -21.78310 -21.36510 -20.42884 -19.50932 -19.36296 -19.23686 -19.16305 -18.76445 -18.67415 -18.46226 -18.32953 -17.70611 -17.57998 -17.30249 -16.64741 -16.18145 -16.10750 -15.83823 -15.65992 -15.50008 -15.32676 -15.20912 -15.15514 -14.94421 -14.73565 -14.70569 -14.65921 -14.58502 -14.40950 -14.18271 -13.90736 -13.80155 -13.70068 -13.50940 -13.06756 -12.90089 -12.71229 -12.54897 -12.48108 -12.23672 -12.21703 -12.19897 -11.86132 -11.82586 -11.75090 -11.63961 -11.01321 -10.96407 -10.66925 -10.31884 -9.90779 -5.24966 -1.16390 -0.40704 0.35416 0.50371 0.96795 1.02257 1.34228 1.35412 1.63330 1.72286 1.88785 2.11774 2.74405 2.85820 2.86723 2.95146 2.98410 3.05579 3.28575 3.38393 3.42821 3.47622 3.50006 3.50726 3.57863 3.71428 3.71782 3.83116 3.90205 3.99334 4.02753 4.05932 4.11453 4.13543 4.25319 4.34025 4.36814 4.45245 4.64859 4.67810 4.68704 4.78711 4.85225 4.88372 4.96908 5.01648 5.21027 5.40349 5.67564 6.16519 6.36214 6.92590 6.95635 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C -0.032 4.032 6 C -0.207 4.207 7 C 0.199 3.801 8 O -0.252 6.252 9 C 0.030 3.970 10 C 0.515 3.485 11 O -0.492 6.492 12 N -0.725 5.725 13 C 0.144 3.856 14 H 0.097 0.903 15 C -0.121 4.121 16 C -0.116 4.116 17 C -0.134 4.134 18 H 0.116 0.884 19 C 0.453 3.547 20 F -0.184 7.184 21 F -0.183 7.183 22 F -0.181 7.181 23 C -0.118 4.118 24 C -0.126 4.126 25 C -0.074 4.074 26 N 0.029 4.971 27 O -0.175 6.175 28 O -0.117 6.117 29 C 0.013 3.987 30 H 0.388 0.612 31 H 0.083 0.917 32 H -0.251 1.251 33 H -0.247 1.247 34 H 0.140 0.860 35 H 0.156 0.844 36 H 0.101 0.899 37 H 0.101 0.899 38 H 0.402 0.598 39 H 0.081 0.919 40 H 0.075 0.925 41 H 0.083 0.917 42 H 0.085 0.915 43 H 0.082 0.918 44 H 0.083 0.917 45 H 0.070 0.930 46 H 0.080 0.920 47 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.969 12.198 3.897 13.145 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.112 4.112 5 C -0.049 4.049 6 C -0.227 4.227 7 C 0.150 3.850 8 O -0.162 6.162 9 C -0.049 4.049 10 C 0.298 3.702 11 O -0.364 6.364 12 N -0.379 5.379 13 C 0.040 3.960 14 H 0.115 0.885 15 C -0.159 4.159 16 C -0.154 4.154 17 C -0.153 4.153 18 H 0.134 0.866 19 C 0.399 3.601 20 F -0.165 7.165 21 F -0.164 7.164 22 F -0.162 7.162 23 C -0.156 4.156 24 C -0.165 4.165 25 C -0.158 4.158 26 N 0.549 4.451 27 O -0.384 6.384 28 O -0.341 6.341 29 C -0.006 4.006 30 H 0.236 0.764 31 H 0.101 0.899 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.157 0.843 35 H 0.174 0.826 36 H 0.119 0.881 37 H 0.119 0.881 38 H 0.236 0.764 39 H 0.099 0.901 40 H 0.093 0.907 41 H 0.101 0.899 42 H 0.103 0.897 43 H 0.101 0.899 44 H 0.101 0.899 45 H 0.089 0.911 46 H 0.098 0.902 47 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 3.369 12.056 2.938 12.858 hybrid contribution 0.383 -0.293 -0.416 0.637 sum 3.751 11.762 2.522 12.601 Atomic orbital electron populations 1.86490 1.16660 1.81996 1.50044 1.24643 0.86308 1.10647 0.96526 0.94637 0.80655 0.77585 0.88015 1.19247 1.01023 0.93231 0.97733 1.21113 0.92902 0.99313 0.91620 1.21198 1.07284 0.92763 1.01409 1.18639 0.90062 0.90657 0.85670 1.86501 1.62871 1.37386 1.29395 1.22739 0.96342 0.94978 0.90814 1.19800 0.79135 0.88187 0.83066 1.90875 1.52356 1.16982 1.76186 1.45832 1.52848 1.15971 1.23231 1.21105 0.97796 0.92554 0.84557 0.88539 1.21746 1.02694 0.97903 0.93587 1.21566 0.96141 0.98981 0.98760 1.22568 1.02127 0.97837 0.92789 0.86551 1.20592 0.74899 0.79916 0.84695 1.93192 1.93725 1.73078 1.56506 1.93197 1.52272 1.78907 1.92039 1.93192 1.57969 1.71149 1.93909 1.21588 1.03529 0.97681 0.92768 1.21884 0.97359 0.98865 0.98350 1.20574 1.10400 0.84143 1.00686 1.43302 0.99204 1.02185 1.00372 1.94553 1.35210 1.66579 1.42034 1.94696 1.54694 1.67507 1.17217 1.20813 0.93048 0.93478 0.93235 0.76355 0.89921 1.17605 1.17176 0.84273 0.82635 0.88086 0.88080 0.76413 0.90059 0.90658 0.89866 0.89652 0.89916 0.89869 0.91118 0.90159 0.81603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.01 12.74 -35.23 -0.45 0.56 16 2 C -0.07 0.18 2.81 36.00 0.10 0.28 16 3 Si 0.69 -2.73 29.78 -169.99 -5.06 -7.80 16 4 C -0.11 0.02 5.42 -104.60 -0.57 -0.55 16 5 C -0.03 0.04 8.66 -39.60 -0.34 -0.30 16 6 C -0.21 0.35 9.04 -39.43 -0.36 0.00 16 7 C 0.20 0.33 6.67 -39.21 -0.26 0.06 16 8 O -0.25 -0.64 7.68 -49.77 -0.38 -1.03 16 9 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 10 C 0.51 0.03 7.87 -10.99 -0.09 -0.05 16 11 O -0.49 -2.74 16.16 -14.36 -0.23 -2.97 16 12 N -0.72 2.49 5.08 -53.80 -0.27 2.21 16 13 C 0.14 -0.37 2.46 -67.92 -0.17 -0.53 16 14 H 0.10 -0.02 7.58 -51.93 -0.39 -0.41 16 15 C -0.12 0.55 5.39 -26.73 -0.14 0.41 16 16 C -0.12 0.39 4.96 -26.73 -0.13 0.25 16 17 C -0.13 0.34 2.17 -90.62 -0.20 0.14 16 18 H 0.12 -0.46 8.14 -51.93 -0.42 -0.88 16 19 C 0.45 0.09 2.69 37.15 0.10 0.19 16 20 F -0.18 -0.21 16.80 2.25 0.04 -0.17 16 21 F -0.18 -0.28 16.80 2.25 0.04 -0.24 16 22 F -0.18 -0.28 16.28 2.25 0.04 -0.25 16 23 C -0.12 0.23 4.96 -26.73 -0.13 0.10 16 24 C -0.13 0.29 5.49 -26.73 -0.15 0.14 16 25 C -0.07 -0.27 6.87 -79.81 -0.55 -0.82 16 26 N 0.03 0.20 4.45 34.03 0.15 0.35 16 27 O -0.17 -1.30 18.45 -29.46 -0.54 -1.85 16 28 O -0.12 -1.03 17.24 -36.49 -0.63 -1.66 16 29 C 0.01 0.02 9.12 -39.61 -0.36 -0.34 16 30 H 0.39 -2.63 8.74 45.56 0.40 -2.23 16 31 H 0.08 -0.35 7.96 -51.93 -0.41 -0.76 16 32 H -0.25 0.52 7.11 56.52 0.40 0.92 16 33 H -0.25 0.28 7.11 56.52 0.40 0.68 16 34 H 0.14 -0.41 4.87 -52.49 -0.26 -0.67 16 35 H 0.16 -0.86 6.30 -52.49 -0.33 -1.19 16 36 H 0.10 -0.55 7.65 -51.93 -0.40 -0.95 16 37 H 0.10 -0.57 7.67 -51.93 -0.40 -0.97 16 38 H 0.40 -2.76 8.60 -40.82 -0.35 -3.11 16 39 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 40 H 0.07 -0.44 8.14 -51.93 -0.42 -0.86 16 41 H 0.08 -0.21 7.80 -51.93 -0.41 -0.61 16 42 H 0.08 -0.30 7.80 -51.93 -0.41 -0.71 16 43 H 0.08 -0.09 7.80 -51.93 -0.41 -0.49 16 44 H 0.08 -0.15 7.80 -51.93 -0.41 -0.56 16 45 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 46 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 47 H 0.17 0.18 7.61 -52.48 -0.40 -0.22 16 LS Contribution 404.37 15.07 6.09 6.09 Total: 0.00 -12.81 404.37 -9.74 -22.55 By element: Atomic # 1 Polarization: -9.44 SS G_CDS: -5.47 Total: -14.91 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -3.05 Total: -0.90 kcal Atomic # 7 Polarization: 2.69 SS G_CDS: -0.12 Total: 2.57 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: -2.24 Total: -6.95 kcal Atomic # 9 Polarization: -0.77 SS G_CDS: 0.11 Total: -0.66 kcal Atomic # 14 Polarization: -2.73 SS G_CDS: -5.06 Total: -7.80 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -12.81 -9.74 -22.55 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.077 kcal (2) G-P(sol) polarization free energy of solvation -12.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -218.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.741 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.548 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds