Wall clock time and date at job start Sat Mar 6 2021 20:21:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.47117 * 2 1 4 4 C 1.50695 * 109.47054 * 239.99742 * 2 1 3 5 5 C 1.38251 * 119.94233 * 120.00451 * 4 2 1 6 6 C 1.38163 * 120.05527 * 180.25730 * 5 4 2 7 7 C 1.38717 * 119.94355 * 359.48558 * 6 5 4 8 8 O 1.35897 * 120.05486 * 180.27938 * 7 6 5 9 9 C 1.42901 * 117.00044 * 0.20993 * 8 7 6 10 10 C 1.50701 * 109.47074 * 180.02562 * 9 8 7 11 11 O 1.21284 * 119.99727 * 359.97438 * 10 9 8 12 12 N 1.34770 * 120.00048 * 180.02562 * 10 9 8 13 13 C 1.46507 * 119.99837 * 179.97438 * 12 10 9 14 14 H 1.08997 * 109.47008 * 34.99863 * 13 12 10 15 15 C 1.53002 * 109.46760 * 154.99786 * 13 12 10 16 16 C 1.53001 * 109.46917 * 179.97438 * 15 13 12 17 17 C 1.53004 * 109.47136 * 299.99791 * 16 15 13 18 18 H 1.08995 * 109.47355 * 300.00468 * 17 16 15 19 19 C 1.52993 * 109.47159 * 179.97438 * 17 16 15 20 20 F 1.39901 * 109.47067 * 60.00228 * 19 17 16 21 21 F 1.39905 * 109.47183 * 180.02562 * 19 17 16 22 22 F 1.39902 * 109.47535 * 300.00260 * 19 17 16 23 23 C 1.53010 * 109.46861 * 60.00140 * 17 16 15 24 24 C 1.53001 * 109.47131 * 299.99862 * 23 17 16 25 25 C 1.38752 * 119.88623 * 0.48724 * 7 6 5 26 26 N 1.48001 * 120.02795 * 179.78553 * 25 7 6 27 27 O 1.21800 * 120.00550 * 179.97438 * 26 25 7 28 28 O 1.21802 * 119.99897 * 359.97438 * 26 25 7 29 29 C 1.38126 * 119.94497 * 359.77081 * 25 7 6 30 30 H 0.96698 * 114.00132 * 300.00399 * 1 2 3 31 31 H 1.09006 * 109.46750 * 120.00020 * 2 1 3 32 32 H 1.48497 * 109.99775 * 178.67816 * 3 2 1 33 33 H 1.48500 * 110.00066 * 299.99826 * 3 2 1 34 34 H 1.08002 * 119.96904 * 359.97156 * 5 4 2 35 35 H 1.07998 * 120.03041 * 179.72211 * 6 5 4 36 36 H 1.08999 * 109.46998 * 299.99535 * 9 8 7 37 37 H 1.08997 * 109.46939 * 60.00207 * 9 8 7 38 38 H 0.97001 * 120.00295 * 359.97438 * 12 10 9 39 39 H 1.08995 * 109.47417 * 300.00296 * 15 13 12 40 40 H 1.09002 * 109.46978 * 60.00580 * 15 13 12 41 41 H 1.08997 * 109.46899 * 60.00048 * 16 15 13 42 42 H 1.08999 * 109.46977 * 180.02562 * 16 15 13 43 43 H 1.09000 * 109.46549 * 59.99704 * 23 17 16 44 44 H 1.08993 * 109.47010 * 179.97438 * 23 17 16 45 45 H 1.08997 * 109.46899 * 300.00050 * 24 23 17 46 46 H 1.08999 * 109.46977 * 179.97438 * 24 23 17 47 47 H 1.08005 * 119.97036 * 179.97438 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7262 -0.0375 -2.1396 6 6 3.1836 -0.6850 -3.2712 7 6 2.8535 -2.0146 -3.4892 8 8 3.3069 -2.6553 -4.5985 9 6 4.1230 -1.9000 -5.4960 10 6 4.5279 -2.7688 -6.6589 11 8 4.1548 -3.9216 -6.7134 12 7 5.3055 -2.2652 -7.6377 13 6 5.6996 -3.1101 -8.7679 14 1 4.8860 -3.7931 -9.0119 15 6 6.0069 -2.2290 -9.9804 16 6 6.4191 -3.1112 -11.1605 17 6 7.6656 -3.9152 -10.7853 18 1 8.4789 -3.2319 -10.5410 19 6 8.0774 -4.7979 -11.9651 20 9 8.3583 -3.9927 -13.0742 21 9 9.2169 -5.5335 -11.6218 22 9 7.0334 -5.6751 -12.2781 23 6 7.3582 -4.7963 -9.5727 24 6 6.9461 -3.9141 -8.3926 25 6 2.0561 -2.6879 -2.5748 26 7 1.6982 -4.1051 -2.8067 27 8 0.9985 -4.6959 -2.0036 28 8 2.1032 -4.6807 -3.8008 29 6 1.5970 -2.0345 -1.4478 30 1 -0.3933 0.4417 0.7650 31 1 1.7923 -0.5139 0.8900 32 1 3.5346 1.7702 0.0322 33 1 1.5616 2.4679 -1.2085 34 1 2.9859 0.9966 -1.9676 35 1 3.8008 -0.1576 -3.9834 36 1 3.5608 -1.0413 -5.8631 37 1 5.0144 -1.5540 -4.9728 38 1 5.6042 -1.3434 -7.5939 39 1 5.1191 -1.6558 -10.2474 40 1 6.8206 -1.5460 -9.7363 41 1 5.6058 -3.7945 -11.4047 42 1 6.6385 -2.4835 -12.0242 43 1 6.5449 -5.4796 -9.8170 44 1 8.2461 -5.3694 -9.3057 45 1 7.7593 -3.2308 -8.1484 46 1 6.7267 -4.5418 -7.5289 47 1 0.9759 -2.5581 -0.7360 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:21:06 Heat of formation + Delta-G solvation = -230.470511 kcal Electronic energy + Delta-G solvation = -38427.672781 eV Core-core repulsion = 32551.888226 eV Total energy + Delta-G solvation = -5875.784555 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.132 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -51.14612 -48.63728 -48.62500 -43.37865 -41.89298 -41.07392 -39.77337 -39.00379 -37.65073 -37.40001 -35.63454 -33.66012 -32.49325 -31.97756 -31.95132 -29.62692 -27.91589 -26.74296 -26.19772 -24.27384 -23.99461 -23.06877 -22.67634 -21.69183 -21.21182 -20.52380 -19.86476 -19.40242 -19.29184 -19.24951 -18.74543 -18.67891 -18.54346 -18.30924 -17.65335 -17.52469 -17.19017 -16.52755 -16.10168 -15.98928 -15.79338 -15.66322 -15.46907 -15.24302 -15.15231 -15.07742 -14.98810 -14.79486 -14.78880 -14.57010 -14.49497 -14.24162 -14.03086 -13.83650 -13.67909 -13.58112 -13.31771 -13.03259 -12.76626 -12.72656 -12.53641 -12.41925 -12.32860 -12.25074 -12.22458 -12.09965 -11.97296 -11.65807 -11.47092 -11.03270 -10.98293 -10.43029 -10.20464 -9.84860 -4.89104 -1.41319 -0.36297 0.04635 0.25171 1.12110 1.27461 1.41064 1.68313 1.75322 1.89799 1.92095 2.24413 2.78523 2.93045 2.97540 3.01243 3.08179 3.24288 3.47039 3.49475 3.53754 3.58737 3.62873 3.81511 3.86763 3.92168 3.93137 4.04762 4.08357 4.13715 4.19911 4.23492 4.24925 4.36441 4.40012 4.48897 4.54585 4.69236 4.69615 4.85120 4.94850 4.94942 5.02752 5.03631 5.10500 5.17247 5.19845 5.39705 5.64265 6.37131 6.41893 6.85810 7.12545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.568 6.568 2 C -0.088 4.088 3 Si 0.779 3.221 4 C -0.117 4.117 5 C -0.027 4.027 6 C -0.189 4.189 7 C 0.194 3.806 8 O -0.288 6.288 9 C 0.022 3.978 10 C 0.509 3.491 11 O -0.562 6.562 12 N -0.702 5.702 13 C 0.142 3.858 14 H 0.063 0.937 15 C -0.109 4.109 16 C -0.117 4.117 17 C -0.123 4.123 18 H 0.141 0.859 19 C 0.446 3.554 20 F -0.188 7.188 21 F -0.192 7.192 22 F -0.193 7.193 23 C -0.117 4.117 24 C -0.119 4.119 25 C -0.101 4.101 26 N 0.034 4.966 27 O -0.191 6.191 28 O -0.172 6.172 29 C 0.002 3.998 30 H 0.407 0.593 31 H 0.098 0.902 32 H -0.270 1.270 33 H -0.282 1.282 34 H 0.163 0.837 35 H 0.204 0.796 36 H 0.141 0.859 37 H 0.143 0.857 38 H 0.424 0.576 39 H 0.089 0.911 40 H 0.103 0.897 41 H 0.068 0.932 42 H 0.095 0.905 43 H 0.063 0.937 44 H 0.081 0.919 45 H 0.094 0.906 46 H 0.052 0.948 47 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.509 16.818 4.494 17.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.196 4.196 3 Si 0.681 3.319 4 C -0.119 4.119 5 C -0.045 4.045 6 C -0.207 4.207 7 C 0.144 3.856 8 O -0.198 6.198 9 C -0.055 4.055 10 C 0.295 3.705 11 O -0.439 6.439 12 N -0.357 5.357 13 C 0.038 3.962 14 H 0.082 0.918 15 C -0.147 4.147 16 C -0.155 4.155 17 C -0.142 4.142 18 H 0.159 0.841 19 C 0.393 3.607 20 F -0.170 7.170 21 F -0.174 7.174 22 F -0.175 7.175 23 C -0.155 4.155 24 C -0.157 4.157 25 C -0.186 4.186 26 N 0.546 4.454 27 O -0.401 6.401 28 O -0.385 6.385 29 C -0.017 4.017 30 H 0.259 0.741 31 H 0.116 0.884 32 H -0.196 1.196 33 H -0.209 1.209 34 H 0.180 0.820 35 H 0.220 0.780 36 H 0.158 0.842 37 H 0.160 0.840 38 H 0.262 0.738 39 H 0.108 0.892 40 H 0.121 0.879 41 H 0.086 0.914 42 H 0.113 0.887 43 H 0.082 0.918 44 H 0.099 0.901 45 H 0.113 0.887 46 H 0.070 0.930 47 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 4.937 16.675 3.494 17.738 hybrid contribution -0.089 -1.637 -0.589 1.742 sum 4.848 15.039 2.905 16.065 Atomic orbital electron populations 1.86444 1.17130 1.82701 1.51599 1.25028 0.86217 1.12369 0.96025 0.93423 0.78098 0.74279 0.86105 1.19692 1.00809 0.92434 0.98929 1.21493 0.91660 1.00193 0.91108 1.21684 1.06280 0.90945 1.01789 1.18851 0.89841 0.91691 0.85221 1.86475 1.63669 1.39498 1.30123 1.23151 0.98039 0.94663 0.89633 1.20410 0.78545 0.87621 0.83972 1.90859 1.55186 1.20070 1.77805 1.45645 1.51360 1.16783 1.21882 1.21048 0.96536 0.92853 0.85797 0.91848 1.21691 1.04049 0.97381 0.91593 1.21596 0.95234 0.98952 0.99760 1.22597 1.03298 0.97399 0.90906 0.84069 1.21075 0.74320 0.79947 0.85405 1.93176 1.93741 1.73057 1.57006 1.93174 1.52827 1.79299 1.92090 1.93166 1.58505 1.71746 1.94090 1.21542 1.02759 0.97761 0.93421 1.21801 0.98186 0.98777 0.96973 1.20873 1.12959 0.81888 1.02882 1.43797 0.98347 1.03715 0.99584 1.94497 1.35627 1.68022 1.41969 1.94684 1.56386 1.69140 1.18325 1.20886 0.93627 0.94449 0.92779 0.74075 0.88388 1.19577 1.20851 0.82020 0.77955 0.84187 0.83974 0.73776 0.89211 0.87870 0.91372 0.88687 0.91795 0.90074 0.88730 0.92964 0.82178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.50 12.74 -148.98 -1.90 0.61 16 2 C -0.09 0.57 2.81 71.23 0.20 0.77 16 3 Si 0.78 -7.98 29.78 68.60 2.04 -5.94 16 4 C -0.12 0.14 5.42 -19.85 -0.11 0.03 16 5 C -0.03 0.14 8.66 22.26 0.19 0.33 16 6 C -0.19 1.16 9.04 22.37 0.20 1.36 16 7 C 0.19 0.63 6.67 22.51 0.15 0.78 16 8 O -0.29 -1.69 7.68 -63.37 -0.49 -2.18 16 9 C 0.02 -0.14 5.22 71.24 0.37 0.23 16 10 C 0.51 0.27 7.87 87.66 0.69 0.96 16 11 O -0.56 -8.07 16.16 16.00 0.26 -7.81 16 12 N -0.70 5.57 5.08 -442.52 -2.25 3.33 16 13 C 0.14 -0.70 2.46 44.99 0.11 -0.59 16 14 H 0.06 0.15 7.58 -2.39 -0.02 0.13 16 15 C -0.11 1.18 5.39 30.60 0.16 1.35 16 16 C -0.12 0.84 4.96 30.60 0.15 0.99 16 17 C -0.12 0.66 2.17 -10.79 -0.02 0.63 16 18 H 0.14 -1.42 8.14 -2.39 -0.02 -1.44 16 19 C 0.45 0.45 2.69 71.98 0.19 0.64 16 20 F -0.19 -0.43 16.80 44.97 0.76 0.32 16 21 F -0.19 -0.73 16.80 44.97 0.76 0.02 16 22 F -0.19 -0.93 16.28 44.97 0.73 -0.20 16 23 C -0.12 0.33 4.96 30.60 0.15 0.48 16 24 C -0.12 0.48 5.49 30.60 0.17 0.65 16 25 C -0.10 -0.92 6.87 36.48 0.25 -0.67 16 26 N 0.03 0.59 4.45 -46.24 -0.21 0.39 16 27 O -0.19 -3.59 18.45 18.89 0.35 -3.24 16 28 O -0.17 -3.83 17.24 25.60 0.44 -3.39 16 29 C 0.00 0.01 9.12 22.25 0.20 0.21 16 30 H 0.41 -5.95 8.74 -74.06 -0.65 -6.60 16 31 H 0.10 -0.95 7.96 -2.38 -0.02 -0.97 16 32 H -0.27 1.90 7.11 99.48 0.71 2.60 16 33 H -0.28 1.24 7.11 99.48 0.71 1.94 16 34 H 0.16 -1.54 4.87 -2.91 -0.01 -1.56 16 35 H 0.20 -3.32 6.30 -2.91 -0.02 -3.34 16 36 H 0.14 -2.04 7.65 -2.39 -0.02 -2.06 16 37 H 0.14 -2.13 7.67 -2.39 -0.02 -2.15 16 38 H 0.42 -7.17 8.60 -92.71 -0.80 -7.97 16 39 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 40 H 0.10 -1.61 8.14 -2.39 -0.02 -1.63 16 41 H 0.07 -0.26 7.80 -2.39 -0.02 -0.28 16 42 H 0.09 -0.81 7.80 -2.39 -0.02 -0.82 16 43 H 0.06 0.06 7.80 -2.39 -0.02 0.04 16 44 H 0.08 -0.20 7.80 -2.39 -0.02 -0.22 16 45 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 46 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 47 H 0.16 0.71 7.61 -2.91 -0.02 0.69 16 Total: 0.00 -38.62 404.37 3.24 -35.38 By element: Atomic # 1 Polarization: -25.13 SS G_CDS: -0.33 Total: -25.46 kcal Atomic # 6 Polarization: 5.09 SS G_CDS: 3.07 Total: 8.16 kcal Atomic # 7 Polarization: 6.17 SS G_CDS: -2.45 Total: 3.72 kcal Atomic # 8 Polarization: -14.67 SS G_CDS: -1.34 Total: -16.01 kcal Atomic # 9 Polarization: -2.10 SS G_CDS: 2.24 Total: 0.14 kcal Atomic # 14 Polarization: -7.98 SS G_CDS: 2.04 Total: -5.94 kcal Total: -38.62 3.24 -35.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -195.088 kcal (2) G-P(sol) polarization free energy of solvation -38.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -233.706 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -230.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds